Carassius gibelio (silver crucian carp): 127952022
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Entry
127952022 CDS
T08819
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
cgib04145
Phagosome
cgib04210
Apoptosis
cgib04510
Focal adhesion
cgib04520
Adherens junction
cgib04530
Tight junction
cgib04810
Regulation of actin cytoskeleton
cgib04814
Motor proteins
cgib04820
Cytoskeleton in muscle cells
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127952022
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127952022
09143 Cell growth and death
04210 Apoptosis
127952022
09144 Cellular community - eukaryotes
04510 Focal adhesion
127952022
04520 Adherens junction
127952022
04530 Tight junction
127952022
09142 Cell motility
04814 Motor proteins
127952022
04820 Cytoskeleton in muscle cells
127952022
04810 Regulation of actin cytoskeleton
127952022
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127952022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127952022
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127952022
03036 Chromosome and associated proteins [BR:
cgib03036
]
127952022
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127952022
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
127952022
04147 Exosome [BR:
cgib04147
]
127952022
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127952022
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
127952022
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
127952022
NuA4 complex
127952022
Chromatin remodeling factors
BAF complex
127952022
PBAF complex
127952022
GBAF(ncBAF) complex
127952022
SWR1 complex
127952022
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
127952022
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
127952022
Exosome [BR:
cgib04147
]
Exosomal proteins
Proteins found in most exosomes
127952022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
127952022
NCBI-ProteinID:
XP_052406213
LinkDB
All DBs
Position
A3:complement(21311516..21315231)
Genome browser
AA seq
375 aa
AA seq
DB search
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaattgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagatgatgctccccgtgctgtcttcccatccatcgtgggtcgccccagacat
cagggtgtcatggttggaatgggacagaaggacagctacgttggtgatgaggctcagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtcaccaactgggat
gatatggagaagatctggcatcacaccttctacaatgagctgcgtgttgccccagaggag
caccccgtcctgctcacagaggcccccctgaaccccaaggccaacagggaaaagatgacg
cagatcatgttcgagaccttcaacacccccgccatgtacgtcgccatccaggctgtgctg
tccctgtatgcctctggtcgtaccactggtatcgtgatggactctggtgatggtgtcacc
cacactgtgcccatctacgagggttacgccctgccccatgccatcctccgtctggacttg
gctggccgtgacctgactgactacctcatgaagatcctgaccgagagaggctacagcttc
accaccacagccgagagggaaattgtccgtgatatcaaggagaagctctgctatgtggct
cttgacttcgagcaggagatgggcactgctgcttcctcctcctccctggagaagagctat
gagctgcctgacggacaggtcatcaccattggcaatgagaggttcaggtgcccagaggcc
ctgttccagccatccttcttgggtatggagtcttgcggtatccatgagaccaccttcaac
tccatcatgaagtgtgacgtcgacatccgtaaggacctgtatgccaacaccgtattgtct
ggtggtaccaccatgtaccctggcattgctgacaggatgcagaaagagatcacatccctg
gcccccagcacaatgaaaatcaagatcattgccccacctgagcgtaaatactctgtctgg
atcggagggtccatcctggcctccctgtccaccttccagcagatgtggattagcaagcag
gagtatgatgagtctggaccatccatcgtccaccgtaaatgcttctaa
DBGET
integrated database retrieval system