Carassius gibelio (silver crucian carp): 127952384
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Entry
127952384 CDS
T08819
Name
(RefSeq) integrator complex subunit 1 isoform X1
KO
K13138
integrator complex subunit 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127952384
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
127952384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
UNC45-central
HTH_RNase_II
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
127952384
NCBI-ProteinID:
XP_052406749
LinkDB
All DBs
Position
B3:complement(13525475..13548842)
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AA seq
2187 aa
AA seq
DB search
MNRPKPTSIRRPSNTKPSGHPPPGDFIALGAKGQSSEPKAIPALLKPASSGLPPDRKREA
SSSLPSSSSLSSLSKRPKHSSTPPSALSRLAEVAAVDKRSISPSIKEPSVVPVEVSPAVL
LDEIEAAEAEGNDEHIEGVLCGAVKQLKMNRAKPDMTLYLSLMFLAKIKPNVFATEGVIE
ALCSLLRRDASINFKAKGNNLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVD
SSHCKTFVDNIQTAFTTKMPPKSMLLQTETGRSGGDLSAGNSPHPSTPDEDEGQTELLIA
EEKLSPEDDGQVMPRYDELAESVEEYVLEVLREQLNRRQPMDNVSRNLLRLLTATCGYKE
VRLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNTHGSDDMEVISNLIKIRLKPKVLLNH
YMLCVRELLKAHRDNLGTTVKFVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLAMVFQ
DLLINKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEASYVDMEFKERFVIQVT
DLLTVSMMLGITAQVKEAGISWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHSVVPTISK
VGPKEYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGLS
RDLPLGPADAMELADHLVKRAAGALSDDLEVLRVERIQLIDAVLNLCTYHHPENIQLPAG
YQPPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPTLKMLMEMVMTNNYSYPPCTV
ADEETKTEMINRELQISQKERQEILAFESHLAAASTKQTITENNSLLLSQLTCLDPKGPP
RRPPPHVLDQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSL
DVLPVQCLCEFLLHDAADDSTSVDDEEEGESKEQRAKKRQRQQKQRQLLGRLQDLLLGPK
ADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGALKDGEDQLMEEDSRDAELLP
GYQWLLQDLPKLPLFDSVRCLTSSALQQAIHMETDPQTISAYLIYLSQHAPVEEQSLHND
LALDVARLIVERSTIMNCLFSKHSCRPESDAVLSALICIFSTYIRRMRKTKEGEDLYSWS
ESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESEFYTLLDIWFPDKKPLPTAFL
VDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYL
DQTVSHDPQTLEQNIMDKNYMAHLVEVQHERGATGGHTFHRLLSASLPPRRDSSEVSRAK
VTVETAHGSVKMRAVSQVPVIGPEDDLAGILLQLFPLKVDPRWPPPPVRPLSLALQQTLA
QEVLRARQGHVQQGGPAGRLLQALAALLNSAHAGALVTAMHHSHTISCPLLRQLHLHQRL
VSQDVGFSSLFFNTVVQMLTWLENSALETGPLHSLLKSLAAQYSHKHRVTDVRTGFLHLA
EALAYRRDSEVAVRGIIASLRAGEKCNAEPELIRKVLQGLMEVKSPYLEELLSLLMTIGT
ETGTTGHTAGPVSMLISLLLQETEERGVKMEVDSKITESTKPGSCSGLLVDWLEQLDPEV
TSVCSDLQQKLLFAQNKAKSGVSVAPSYRPYLLALLTHQSNWSTLHQCISSLLNKHRDQR
LDPTSALDFLWACSHIPRIWQGRDQKTPQKRTEQFVLKLSSEELISLVDLILSESELSCR
DSDTSKSALDQVSCSLLQSRLPLLHSCLHSDLDNVKKVSEYLISCVKKWGDSIMSKRCQT
LLLQIYLHFPEVIQHLRLPETTLSAEGAADGSTCKLDVLVHRLITLLADTGDSESAENRA
SDASLACRKLAVSHPVLLLRHLPMIAALLHGRIHLNLQEIRQQNHLTFFSDVLVILELLQ
PLVFHSDHQRALQDCLLSFIKVLQNFKRSSRMPVINKFVQFIQKYINHDAASAVPFLQKH
SDVLQGLSTENPDLVQLKSLLAGLTLPVKCGSSESAAEDREAEDSSSGSLPLLNISASMP
LTDMTKCLKKISKGEAIEDVFEGLTEVDEKSKRNPEIIQYFVNDLQRLMSSPEEVCRNMA
FSLALRCMQNIPSMAAEFLPTFMYCLGSGDFDVVQTALRNLPEYVLLCQEHADILLHKAF
LVGIYGQIDTSSMITESLKVLRMEATT
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaaagccgacaagcattaggcgacctagtaacaccaaaccatcaggtcac
ccccctccaggagatttcattgctcttggagcgaagggtcagagcagtgagccgaaagcc
atcccagctctgttgaagccggcgtccagtggtttgcccccggaccgcaagagagaggcg
tcttcatctctcccctcttcctctagcctgtccagtctttccaaacggcccaagcactct
tctactccacccagcgccctctcacgcctcgctgaggtggctgctgttgacaaaagatct
atatccccctccatcaaagagccatccgtagttcctgttgaagtgtcacctgctgtgctt
ctggatgagattgaggcagcggaggcagagggtaatgatgagcacattgagggtgtgctc
tgcggggctgtcaaacaactgaagatgaaccgagccaagcctgacatgacgctatacctc
agcctcatgtttctcgccaaaatcaagcccaacgtctttgccacagagggtgtgatagag
gctctctgcagtttgctccgccgtgatgcatcaatcaactttaaggccaaggggaacaac
ctggtgtctgtgctggcctgtaatttactgatggctgcctatgaggaggatgaaaactgg
cctgagatatttgttaaagtctacatcgaggactctctcggtgagcgtatctgggtggac
agctcgcactgtaaaacttttgttgataatatccagactgccttcacaaccaagatgccc
cccaagagcatgctgctccagacggaaacagggcgatcagggggagacctcagtgctggg
aacagccctcatccttccactccagatgaggatgaaggtcagactgagcttttaattgcg
gaggagaaattgagtccagaggatgatggacaggtcatgcccaggtacgatgagcttgct
gaaagtgtggaggagtatgtcttggaagttttgagggagcagctgaaccggcgtcagccc
atggataacgtgtccaggaacctcctgcgcctcctcacggccacctgtggttataaagag
gtccgactgatggccgtgcagagactcgagatgtggttacagaatcctaagctgactcgg
ccagcacaggaccttctgatgtctttgtgcatgaactgtaacacacacggctcagacgac
atggaggtcatctcgaacctcatcaagatccgcctcaaacctaaagttctcctcaaccac
tacatgctgtgtgtcagggagcttttgaaggctcaccgagataatttgggcactacagtg
aagtttgtgatctttaacgagctgtcaaatgccagaaatcccaataatatgcaagtgctc
catacagttctgcagcatagcccagagcaggcacccaagtttctggccatggtgttccag
gacctgctgatcaataaggatgactacctgcgggcctcacgtgccttgctcagggaaatc
atcaaacagaccaaacatgagatcaacttccagtctttctgtttaggcctcatgcaggag
aggaaagaggccagttatgtggacatggagtttaaagagcgttttgtcatccaagtgacg
gatctcttgaccgtgtctatgatgctagggatcacggctcaggttaaagaggccggcatc
tcctgggacaaaggagagaagaagaatctggaggtgctgaggtcctttcaaaaccagatt
gctgccatccagagagatgctgtgtggtggctgcactccgtggttcccaccatcagtaaa
gtgggacctaaagaatatgtgcactgtctacacaaagtgctttttacagagcagcctgag
acgtattacaaatgggacaactggccgcctgagagtgacagaaatttctttctccggctg
tgctcagaggttcctctactggaggacacactgatgcgcatcttggtgatcggtctgtct
cgggatctgcccctgggcccagctgacgccatggagctggccgatcacctggtgaagagg
gctgcgggagctctgtctgatgacttggaagtgttgcgagtcgagaggatccaactcatc
gatgctgtgctgaacctgtgcacttaccatcacccagaaaacatccagctgcccgcaggc
tatcaacctccaaatctggccatatcaactctttactggaaggcttggctgctgctgctt
gtggtcgcagcgttcaacccacagaaaatcggtttggcagcgtgggatggttaccccact
ctgaaaatgctcatggagatggttatgacaaataactactcctatcctccatgcacggta
gccgatgaggagaccaaaaccgagatgatcaaccgagagctgcagatctctcagaaggag
aggcaggagatcctggcctttgagagccacctggcagccgcctccaccaaacagaccata
acagagaacaacagcctcctgctgtcccagctcacctgcctggacccaaagggccctcct
cgtaggccaccacctcatgtcctggatcaagtaaagagtctgaaccagtctctgcgtctg
ggccatcttctgtgccgcagccgcaaccctgacttcctgctcaatattatccagagacaa
gcttcttctcagtctatgccgtggctggctgatctcgtccagtccagtgaagggtccttg
gatgtgctgcccgttcagtgcctctgtgaattcctcctccacgatgctgctgatgactcc
acctccgttgatgacgaggaggaaggagagagtaaagagcagcgagcgaagaaaagacag
aggcagcagaaacagcggcagcttcttggacggctccaggacctacttctgggtcctaag
gctgatgaacagaccacatgtgaagtcttggactacttcctgcgccgtctcagctcttct
caggtggcctcaagggtgctggccatgaagggtttgtctctggtgctgactgagggagcg
ttaaaagacggagaggatcagctcatggaggaggactccagagatgctgagctactgcca
ggctaccagtggctccttcaggacctccccaaactacctctgtttgatagtgtaagatgc
ttgacgtccagcgccttacagcaggccattcacatggagaccgatcctcagaccatcagc
gcatacctgatttacctttcccagcatgcaccagtggaggagcagtccctccacaatgac
ctggccttggatgtggctcgtctgatagtggagcgctccactataatgaactgcctgttt
tccaagcactcctgcaggcccgagtcggatgccgttctctctgctcttatctgcatcttc
tccacctatatccgtcgtatgaggaagacaaaagagggagaggacctctatagctggtcg
gagtctcaggatcaagtgttcctgcggtggaccacaggagaaacggccaccatgcacatc
ctagtggtccatgctatggtcatcctgctcacactgggacctcccaaaggggaaagtgag
ttctacacactgctggatatctggtttcctgataaaaagccccttcccactgcattcctg
gttgatacatctgaggaagcccttctgttgcctgattggctgaagttaagaatgatccga
tctgaagtctcccgattggtcgatgcagccctgcaggatctggagccccagcagctgctg
ttgttcgtccagtccttcgggatccccgtctccagcatgagcaaactgctccagtatctg
gaccagaccgtgtcccatgatcctcaaacactggagcagaacatcatggacaagaactac
atggctcatctagtggaggtccagcatgagagaggagccacaggtggacacacgtttcac
cgtttactcagtgcttcacttcctccgcgcagagacagctccgaggtgagcagagctaag
gttactgttgaaacggcccatggctctgtgaagatgagagcagtgagtcaggtgcccgtg
atcggcccagaggatgatctcgctgggatcctactacagctcttccctctgaaagtggat
cctcgctggcctcctcctccggtccggccgttgtcattagctctgcagcagactctggcc
caggaggtgctgcgggcacgacagggtcacgtccagcagggtggtcccgcggggcgactc
ctacaagccttagcagcccttctaaactcggcccacgctggagccctggtcacggcaatg
caccacagccatacgatctcctgccctctactgcgccaactccatctccaccagcgtttg
gtgtctcaagatgttggcttctcgtcactgttcttcaacaccgttgtgcagatgttaaca
tggttggaaaactcagcgctagagacagggccactccacagcctcctgaaatctctggca
gctcagtactctcacaaacatcgcgtcacagatgttcgtactggatttctgcacttggct
gaagccctggcgtacagacgggactctgaagtggcagtgaggggcattattgcctctctg
agagctggagaaaaatgcaacgctgaacctgaactcattcgaaaagtgttgcagggcctc
atggaggtgaagtctccatatctagaggagctgttgtccctgcttatgaccatcggtacg
gagactggaaccacgggacacacagccggcccagtttccatgttgatctctctgctgctt
caggaaacagaggagcgaggggtgaaaatggaggtggattccaaaatcactgagtcaacg
aagcctggctcgtgttcagggctgctggttgactggctggagcagcttgaccccgaggtg
acctcggtctgctcagatcttcagcagaagctgctttttgctcaaaacaaggctaagagt
ggagtgagtgtggccccctcctacaggccgtacctgttggccctcctcacacaccagtcc
aactggagcaccttacatcagtgcatcagctctctgctcaacaaacacagagaccagaga
ctggacccaacctcagcactggacttcctgtgggcctgcagtcacattccacgcatttgg
caggggcgggatcagaaaaccccccagaagcgcacggagcagtttgtgttgaagctgtct
tctgaggagctcataagtctggtggacctcattctgtctgagtcagagctgagctgccgt
gactcagacacctccaagagtgctttggaccaggtctcctgctctcttctccagtcacgc
ttgcccctcctgcacagctgtctccactcggacctggacaacgtcaagaaagtctcagag
tacctcatcagctgcgtcaagaaatggggagacagtataatgagtaagaggtgtcagacg
ctgctgctgcagatctacctgcacttcccagaggtcatccaacacctccgcctaccagag
accaccctgagcgctgagggggcagcagacggcagcacctgcaagctggatgttctcgtg
catcgtctcatcactctgctagccgacaccggcgactccgaatcagctgagaaccgcgcg
tctgatgccagtctggcctgcaggaaactggccgtctctcaccccgtgcttctactcaga
cacctgcccatgatcgctgcgctcctgcacggtcgcatccatctgaacctgcaggagatc
aggcagcagaaccatctgaccttcttcagcgatgtcctggtgatcctggagctgctgcag
ccgctggttttccactctgaccaccagagggcactgcaggactgtctgctgtccttcatc
aaagtgctgcagaacttcaagagatcatcccgtatgcccgtcataaacaaatttgtgcag
ttcatccaaaagtacatcaaccatgatgcagcatctgctgtgccgttccttcagaaacac
tcagatgtgctccagggactatccactgagaatccggacctggtgcagctcaagtctttg
ctcgctggactgactctgcctgtgaagtgtggttcctctgagagcgctgctgaggacaga
gaagcagaggattcgtcttccggctccctccctctgctcaacatctccgcttccatgccg
ctgactgacatgactaaatgcctgaagaagatctccaaaggagaagcaattgaggatgtg
tttgaggggttaactgaagtggatgagaaatccaaaagaaatccagagatcattcagtat
tttgttaacgatctgcagaggttgatgagttcccctgaagaagtgtgccgcaacatggcg
ttcagtctggccctgcggtgcatgcagaacatccccagtatggctgctgaattcctgcca
accttcatgtactgtctgggcagcggggactttgatgtagtgcagacggccttgagaaac
ttgcctgaatatgtgttgctctgtcaagaacatgctgatattcttctccataaggcgttt
ttagtgggcatctacggtcagattgacaccagctccatgatcacagaatccttgaaggtc
ttgcgcatggaggcaaccacatag
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integrated database retrieval system
