Carassius gibelio (silver crucian carp): 127952683
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Entry
127952683 CDS
T08819
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127952683
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127952683
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
127952683
NCBI-ProteinID:
XP_052407297
LinkDB
All DBs
Position
B3:25722612..25755345
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AA seq
1834 aa
AA seq
DB search
MPKRKVNLMEVWRRNRADHPNRAKNLKLLPRQLAQLRDPEVVAALLQQNVKMASLLPPTG
ADVFRPFTLESLAEIERRMAEEAAEQEQMKAQNIEVPEEDLPKPTSDLEAGKPLPFIYGD
PPPNLLNVPLEELDPFYKAKKTFIVVTKGNTIYRFNAEPACYILSPFSPIRRVAIRILIH
SLFSMFIMLTILANCVFMTMGDPPEWSKIVEYVFTGIYTFEALVKVMSRGFCIGDFTFLR
DPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKL
ADVMILTVFCLSVFALIGLQLFMGNLRQKCVRSIGWSDSDNLTMLFNYTDINGTANSTFD
FQEYIDNPANHYYVPGQMDPLICGNNSDAGKCPEGYTCMKAGQNPNYGYTSYDNFAWAFL
ALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEAT
IAEAKEKEEEYAKILEQLKKQAEQKNNMINGSKTSLSSKKKDDDDQMQKDYDGIALKPLS
KSNGSKGSMNYLEVPDSQMRKPSAVSTTDNALDELEDTQRPCPPCWYKFADIFLKWDCCL
PWVKFKKLIYLFVMDPFVDLGITICIVLNTMFMAMEHYPMTPHFEHMLSVGNLVFTGIFT
AEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELSLADVHGLSVLRSFRLMRVFKLAKS
WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISEDCVLPRW
HMTDFFHSFLIIFRVLCGEWIETMWDCMEVAGQGMCIVVFMMVMVIGNLVVLNLFLALLL
SSFSGDNLSASDDEGEMNNLQIAVARITRGIDWVKAFVIGHLRKCLGLKPKEEGVKANEE
STSKITMNSGMSDVKVPIANAESDDDDDDDDGNSSSEDGDKEDIDKNTKKKDGDESSTCN
TVDKPPEVEEVVEEEEEDSTIPKDCYTENCLRRCPCLELDVTQGKGRTWWNFRKTCYAIV
EHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVIEMLLKWVAYG
FKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRV
VVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCYNMTSKERFPVDLVNNKSD
CLMLSEDDPSVRWMNSKVNFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRDVEKQPDYES
NLYIYTYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKIRGTDIFMTEDQKKYYNAMKKLG
AKKPQKPIPRPTNCCQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSAEKEYILFF
INFVFIVLFTGECILKITALRYHYFSIGWNIFDFVVVILSILGLLLVDLIEKYFVSPTLF
RIIRLARIGRVLRLTRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFGYV
KKEGGIDDMFNFETFGNSIICLFMITTSAGWDGLLAPILNSPPDCDPDVEHPGSPVRGNC
GSPAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFEMFYETWEKFD
PTASQFIAYSRLSEFCDTLKDPLRIAKPNTLKLITMDLPMVPGDKIHCLDILLALTTEVL
GDSDAMDAMKATMEEKFMANNPSKVSYEPITSTLRRKQEEVSASTIQRAYRKHVLKRGLK
HASYMYREKTDSKRQGEEVPEKVGMIAKKMSCLYGDQAIEDDKPKGFSLSQRGKPQHGGM
RPPVRVQSDVVLHSAPFPVPDSSATAENLRESIV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgaaaggtaaacctaatggaggtttggcgcaggaatcgtgctgatcatcca
aacagagctaagaacctaaaactattgccacgtcaactggcacaattgagagaccccgaa
gtggtggcagccctccttcagcagaatgtcaagatggcgagcctgctccctcccacaggt
gccgatgtgttccgccccttcactttggagtcgctggccgagatcgagcggcggatggca
gaagaggccgccgagcaggagcagatgaaggcccagaatatcgaggtacctgaggaggat
ctgcccaaacccaccagtgacttagaagcaggaaagcccctacccttcatctacggagac
cctccaccgaatctcctcaatgttcctttggaagagttggatccattctacaaagccaaa
aaaacgttcatcgtggtcaccaaaggcaatacaatataccgattcaatgctgagcctgca
tgctacattctaagtccattcagccctattcgacgagtggccataagaatactcatacat
tcattatttagcatgttcatcatgctaaccatcttggcaaactgcgttttcatgacgatg
ggtgaccctccagaatggagcaaaatagtggagtacgttttcacaggcatctacaccttt
gaggcgcttgtaaaggtgatgtccagaggcttctgcatcggtgacttcacattcctgcga
gatccgtggaactggctggattttatggtcatctccatggcgtacctcactgagtttgtg
gacttgggcaatgtatccgctctgaggactttccgtgttcttcgtgccctgaaaacaata
actgtaattccaggtcttaaaaccatcgttggggccttgattcagtcggtgaagaaattg
gcggatgtcatgatcctcactgtcttctgtctcagcgtgtttgctctcattggcctgcaa
ctgttcatgggaaatttgcggcaaaagtgtgtccggtctattggctggagcgacagtgat
aacctgaccatgctcttcaattacacagacatcaatggcactgccaacagcacattcgac
tttcaggaatatattgataacccagcgaaccactactatgtgcctggccaaatggatcca
ttaatatgtgggaacaactctgatgcagggaagtgccctgaagggtacacatgcatgaaa
gctggacaaaacccaaattatggctacactagttacgacaactttgcgtgggctttctta
gcccttttccggctaatgactcaagacttctgggagaacttgttccagttgacgctccgt
gctgcagggaagacatacatgatcttctttgtagtcatcatcttcttgggttcgttctac
ctcatcaatctgattctggctgtggtggccatggcgtatgctgaacagaacgaagccacc
attgcagaagctaaagagaaggaggaagagtatgcgaaaatcctggaacagctcaagaaa
caagctgagcagaagaacaacatgataaatggcagtaaaacatcactatccagcaaaaag
aaagacgatgatgaccaaatgcagaaggactatgacgggatcgcactgaagcccctctcg
aagtcaaatggatccaaaggtagcatgaattatttggaagtccctgactcgcagatgaga
aaaccgagtgcggtgagcaccacagacaatgctttagatgagctggaggatactcaaagg
ccgtgtcctccctgctggtacaagtttgcggacatattcctgaaatgggattgctgcttg
ccatgggtgaagttcaagaagctcatctacctatttgtaatggacccttttgtggatctg
ggcattaccatctgcattgtgctcaacaccatgttcatggctatggagcactatcctatg
actcctcatttcgaacacatgttgtcagtgggaaacctggttttcaccggtatcttcaca
gcagagatggtgctgaaactgatcgcactggacccgtattattacttccaagttggctgg
aacatttttgacagcataatagtgaccatgagtctggtggagttgagcttagctgatgtt
catggcttgtctgtgctgaggtccttccgtttgatgcgtgtgttcaagctggcaaaatct
tggccaaccctaaacatgctgataaagatcatcggtaactctgtaggtgctcttgggaat
ctgaccctcgtcttggccattattgtcttcatctttgctgtggtggggatgcagcttttc
ggaaaaagctatagggactgtgtgtgtaagatatcagaggattgtgtcctccctcgctgg
cacatgacagatttctttcactcgttcctcatcatctttcgtgttctgtgtggggaatgg
atcgaaacaatgtgggactgcatggaagtggctggccaaggcatgtgcatcgtcgtcttc
atgatggtcatggttataggaaacctagtggtgttgaacctcttcctggctctgctgctc
agctccttcagcggagacaacctgtcagcgtctgatgatgaaggggagatgaacaatctg
cagattgccgttgctagaattacaagaggcattgactgggtaaaggcctttgttatcgga
catttgagaaaatgtctgggcctgaagcctaaggaagagggtgtgaaagcaaacgaagaa
agcacttctaaaatcaccatgaattcgggtatgtccgatgtcaaagtgcctatagccaac
gctgaatcggatgacgatgatgacgatgatgatggcaacagctcttctgaggatggagac
aaagaggacatagataaaaataccaaaaagaaagatggagatgaatcctcaacctgcaac
acagtggacaaacctcctgaggtagaagaggtggtagaagaggaagaagaggactccacc
atccctaaagactgttacacagagaactgcctcaggcgatgtccttgcttggagcttgac
gtgacccaaggtaaagggaggacatggtggaatttccgtaaaacctgctacgccattgtg
gagcacagctattttgaaaccttcatcatcttcatgatcctcctcagcagtggagcatta
gcatttgaggacatatatattgaacagcgaagaatgattaaaatcatccttgaatatgca
gatcaggtcttcacttatgtgtttgtcattgagatgcttctgaaatgggtagcctatggc
ttcaaggtctatttcacaaacgcatggtgttggctggactttctcatcgttgatgtgtcc
ctgatcagtttgactgcgaatatcttaggttactctgaactgggggccattaagtctctc
aggactttgagagcgctgagacctcttcgagctctctccaggtttgaaggaatgagggtg
gtggtgaacgctctggtgggggccattccatccatcttcaacgttctcctggtctgcctg
atcttctggctcatcttcagcatcatgggagtcaacctttttgctggaaagttctcctac
tgctataacatgacatccaaagaacgttttccagtcgatctggtcaacaataagagtgac
tgtttaatgctctcagaggatgatccaagtgtgcgatggatgaattcaaaggttaatttt
gataacgtaggcatgggatacctctccttactgcaagtggcaacattcaaaggatggatg
gacatcatgtatagtgctgtggattcacgtgatgttgaaaagcagccagactatgagtcc
aacctctacatatacacttactttgtcatcttcatcatttttggctctttttttaccctc
aatctattcatcggtgtcatcattgacaatttcaaccaacaaaaggcaaagataagagga
actgacatcttcatgaccgaggatcagaaaaaatactacaatgccatgaagaaacttggc
gccaaaaagccacagaaaccaattccaaggcctacgaattgctgccaaggtttggtgttc
gacctggtcaccaagcagttctttgacatcttcatcatggtgatgatctgcctgaacatg
gtgaccatgatggtggagaccgatgaccagagtgcagagaaggaatatattctgtttttt
atcaacttcgtctttatcgtactcttcaccggggagtgtatactcaagatcactgccctg
cgctatcactacttttccattgggtggaacatttttgattttgtggtggtcattctttca
atattaggtcttttgctggtagatctcatcgagaagtactttgtgtcgcctacgctgttt
cgcatcatccgactggccagaatcggccgcgtcctgcggctcacccgcggcgccaaagga
atccggacgttactgttcgcgctgatgatgtcacttcctgccctcttcaacatcggcttg
cttctgttcttaatcatgttcattttctccatatttggcatgtccaacttcggctatgtg
aaaaaagaaggaggcatcgatgacatgtttaactttgagaccttcgggaacagcatcata
tgcttgttcatgatcacaacctcggccggctgggatggtttgctggcccctatactcaac
agcccaccagactgcgacccggatgtggagcacccgggatcgcctgtccgaggaaactgc
gggagccctgcggtaggcatcgtcttcttctgcagctacattgtcatgtccttcctcgtc
gtggtcaacatgtacatagccattatccttgaaaacttcaacgtggcgacagaagaaagc
agcgaccccttgtgcgaggacgactttgagatgttctacgaaacctgggagaagttcgac
cccaccgcctctcagttcatcgcttacagtagactgtccgagttctgcgacacgctgaaa
gaccccctgaggatcgcgaagccgaacacccttaagctgatcacaatggaccttcccatg
gtccccggtgataagatccactgtctggacatcctcctggccctcactacagaggtgctg
ggagattctgatgccatggatgccatgaaagcaactatggaggagaagttcatggccaac
aacccctcgaaggtttcgtatgagcccatcaccagcactctcagacggaagcaagaagaa
gtgtccgcttcgaccattcaaagagcctaccgcaagcacgtcctcaaacgcggcctcaaa
cacgcctcgtatatgtacagagagaagacggactcgaagagacaaggtgaagaggtgcca
gaaaaagtggggatgatagctaagaaaatgagttgtctgtatggagatcaagccattgaa
gacgacaaacctaagggtttctccctctctcaacgtgggaagccacaacatggggggatg
cgtcccccggtgagagttcagagcgatgtggtcttgcactctgcccctttccccgttcct
gactcctcagccactgcggaaaacttgagggagtccattgtgtaa
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integrated database retrieval system
