KEGG   Carassius gibelio (silver crucian carp): 127952775
Entry
127952775         CDS       T08819                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04145  Phagosome
cgib04514  Cell adhesion molecules
cgib04672  Intestinal immune network for IgA production
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127952775
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127952775
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127952775
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127952775
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127952775
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127952775
  Exosomal proteins of epithelial cells
   127952775
  Exosomal proteins of breast milk
   127952775
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 Ig_3 C2-set_2 ig I-set C2-set_3
Other DBs
NCBI-GeneID: 127952775
NCBI-ProteinID: XP_052407470
LinkDB
Position
B3:complement(45653115..45666549)
AA seq 240 aa
MELYITILTLSAVLSTRAQFEHEAFLYAACSDVEEEFYIGYDEEELAHVNFKQKTVVETL
PDVWGSKNITFLKNYEFGADAIVGCKRDLPMFIQTFKSLPLEIDLDAPRTSIYAKDEVEL
GIQNTLICHVTGFYPPSVNISWTKNNVIVTDGISLSQYRPRTDDTFNIFSTLKFTPTEGD
IYSCTVNHKALQGQPQTKIWDVDVALPSVGPAVFCGVGLTLGLLGVISGTFFLIKGHNCH
NT seq 723 nt   +upstreamnt  +downstreamnt
atggagttgtacataaccattctcaccctaagcgctgttctctcaactagggctcaattt
gaacatgaagcttttctatatgctgcttgctctgatgtggaagaagagttttacattgga
tatgatgaagaggaactggcgcatgtcaactttaaacaaaagacagtagtagagacacta
cctgatgtttggggatcaaaaaacataacatttctcaaaaattatgaattcggtgctgat
gcaatagtaggatgcaaacgtgacttaccaatgtttattcaaacattcaagagcctacca
ctcgaaatagatctagatgcaccccggacatccatctatgcaaaggatgaagtagaactg
ggtattcagaacactctcatctgtcatgtgactggcttctatcctccatctgtcaacatc
tcatggactaagaataatgttattgtgacagatggcataagtttaagtcagtaccgtcca
aggacagatgatacattcaacatcttctccactcttaagttcacacctactgaaggagac
atttacagctgtactgtgaaccacaaagccctccaaggtcaaccacagaccaaaatatgg
gatgtagatgttgccctcccaagtgttggtcctgcagtgttttgtggagtaggtctgact
cttgggctgttgggagtcatttcgggaacgttcttcctcattaaaggacacaactgtcac
taa

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