Carassius gibelio (silver crucian carp): 127953462
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Entry
127953462 CDS
T08819
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127953462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127953462
04121 Ubiquitin system [BR:
cgib04121
]
127953462
Membrane trafficking [BR:
cgib04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
127953462
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127953462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
F-box
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
PQQ_2
Beta-prop_VPS8
Beta-prop_RIG_1st
WD40_RFWD3
Ge1_WD40
Beta-prop_LRRK2
Beta-prop_NWD2_C
WD40_like
KNTC1_N
Beta-prop_IFT140_1st
eIF2A
CDtoxinA
Beta-prop_IFT140_2nd
PALB2_WD40
Beta-prop_WDR19_2nd
Nop14
Motif
Other DBs
NCBI-GeneID:
127953462
NCBI-ProteinID:
XP_052408671
LinkDB
All DBs
Position
A1:2701456..2801987
Genome browser
AA seq
700 aa
AA seq
DB search
MNQDLLSGGSSSRASQPPRPGAGNSSSGGAEHMNLVLEEQQRREAAEEEEGRRREVNGDQ
KGISEWMWEQEQRRRHHDDDEEEENNGGREARLGSQEDDDERPEDGLEEMDQDSDEFEHS
EEEEEEEEDEEEGLHSPSLRTPASDRNDNSEQSSGRQHQRSSSFCKNKMKRKLDHDSEVR
TSGKKPCHSPTGLPFPATPTTFRDIRVVIGQGQQRRRITSIQPPTGLQEWLRTFQSWSGP
EKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISHLPRELALHVLSFLEPKDLLQAAQT
CRYWRILAEDNLLWREKCREEGIDEPLYIRRKKVIKPEFTHSPWKSAYIRQHRIDTNWRR
GDLRSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS
QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD
IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL
QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWD
IKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGG
SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggatctgctgtcggggggcagcagcagcagggcgtcccagccgccgaggcct
ggggcaggtaacagctcctccggcggcgcggagcacatgaacctggtgctggaggagcaa
cagagaagagaagcagccgaggaggaggaaggacggaggagggaggtgaacggagaccaa
aagggcatttctgagtggatgtgggagcaggagcagcgtagacggcatcacgacgacgac
gaagaggaggagaataacggcggaagggaagcgagacttggttcacaggaagatgacgac
gagcggccggaggatggcttggaggaaatggaccaggatagcgatgagtttgagcattca
gaagaagaagaggaggaggaggaagatgaggaggaaggcctccactctccctccctcagg
acccctgcgtcggaccgtaatgataactcggagcagtcctctggacgacagcaccagcgc
tcttcctcgttttgcaagaataagatgaagaggaagttggaccatgactccgaggttcga
acttcaggaaaaaagccctgtcacagtcctacaggactgccgttcccagccacccccact
acgtttcgggacattcgagtggtcattgggcagggtcagcagagacggcgcatcacgtcc
atccagcctcccaccggtctgcaggaatggctgcgcacctttcagagctggagtggtccg
gagaagctgctggcgctggatgagttgattgacagctgtgagcccacgcaggtgaagcac
atgatgcaggtgatcgaaccacagtttcagagagacttcatctcacacctgcccagagag
ttggccttacacgtgttgtcattcctggagcccaaggatctgcttcaggcagctcagacg
tgtcgttactggcgcatcctagcggaggacaacctgctctggagggagaaatgcagagaa
gaaggtattgacgagcccttgtacataaggagaaagaaggttatcaagccagagttcaca
cacagtccctggaagagtgcctacattagacaacacagaatagacaccaactggaggaga
ggagacctcagatcaccgaaggtgttgaaaggccatgacgatcatgtgatcacctgtctc
cagttctgtggaaaccgcatcgtgagcggctcagatgacaacacgctcaaagtatggtct
gctgttaccgggaagtgtttacggacgttagttggccacaccggcggggtctggtcctct
caaatgcgagacaacatcattatcagtggctccacagaccgaacgctgaaggtctggaat
gcagagacgggagaatgtatccacacgctgtacggtcatacctcaacagtgcgctgtatg
cacttgcatgagaaaagggtggtgagtggttcccgggacgccacgctacgggtttgggac
attgagacgggtcagtgtttgcacgtgctcatgggtcacgtggcggccgttcgctgcgta
cagtatgacggccgtagggtggtcagcggagcctacgacttcatggtgaaagtgtgggat
cctgaaacagagacctgtctacacacactccagggtcacaccaacagagtctactcccta
cagtttgacggcatccatgtggtgagcggttcgttggacacgtcgatccgggtgtgggat
gtagagactggaaactgtattcacacgctcacaggtcatcagtctctcaccagcggcatg
gagctcaaagataacatcctggtctccggaaacgcagactccaccgtcaagatctgggac
atcaagaccggccagtgcctacagacactgcaaggtccccacaagcaccagagtgcagta
acctgtctgcagttcaacaagaattttgtcatcaccagctccgatgacggtacggtgaag
ttgtgggatcttcgtacgggcgagttcatccgtaatctggtcacactggagagcggcggc
agcggcggcgtggtctggcggatccgtgcatccaatactaaactggtttgtgcggtgggc
agccgtaacggcacggaggaaaccaagctcctggtgctggacttcgacgtggacatgaag
tga
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