Carassius gibelio (silver crucian carp): 127957102
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Entry
127957102 CDS
T08819
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04137
Mitophagy - animal
cgib04141
Protein processing in endoplasmic reticulum
cgib04210
Apoptosis
cgib04217
Necroptosis
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04920
Adipocytokine signaling pathway
cgib05132
Salmonella infection
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127957102
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127957102
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127957102
09143 Cell growth and death
04210 Apoptosis
127957102
04217 Necroptosis
127957102
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127957102
04622 RIG-I-like receptor signaling pathway
127957102
09152 Endocrine system
04920 Adipocytokine signaling pathway
127957102
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127957102
09171 Infectious disease: bacterial
05132 Salmonella infection
127957102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127957102
04121 Ubiquitin system [BR:
cgib04121
]
127957102
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127957102
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127957102
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127957102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
ATG16
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
Dynamitin
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127957102
NCBI-ProteinID:
XP_052411444
LinkDB
All DBs
Position
B5:complement(13549958..13562002)
Genome browser
AA seq
583 aa
AA seq
DB search
MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCFYCFNR
TVGSGPQKCNACIKEDIFEEPTSILIQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDLSVEKEKIHDHERACA
HEHLNLLLHYIMGMKVSLEGLQPQSLELAGHKAHELHQALRDLETRVSQLSAIPGPTGPP
VQGVPSSSSSSSSSSAPPTTLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQELEVK
TGTFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEM
EGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNG
DGTGRGTHLSLFFVVMRGTSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQR
PVSDMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcaagaaccctcccccccgtcctccatggagaacaataagcctgggttccca
aagaagattctggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgagaagaccgttccaagcgcagtgcggtcatcgcttttgtttttactgcttcaaccgg
actgttggatctggaccgcagaaatgcaatgcctgtatcaaggaggacatcttcgaagag
cccacgtcgatcctcatacaaggatgcgcatttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtgtgcttcaacgaaggctgctcctggaaaggcagtattaaagat
tatgagttgagccatgaggggaagtgtgagttcatgattctgccgtgtcctttgtgcaaa
gagctgattagactgaacgaacaggagcgtcataatgaacgcgagtgtcctgagagaacg
ctcaactgcaagtactgcaaagagccatttcacttcaaaaacatcaaggcccatgatgag
atctgtcccaaatatcctatgatttgtgaaggatgtgcgaagaagaaaatccccagagaa
aagtatgttgaccacatcaagttctgcagcaagttcaggactccatgcagatatcatgtg
gttggctgcgacttgtcagtggagaaggagaagatccatgatcacgagcgtgcctgtgct
cacgaacatctcaacctgctgttgcactacatcatgggcatgaaggtcagtctggagggt
ctgcagccccaaagcctggagctggccggtcacaaagcacacgagcttcaccaggcgctc
cgagacctggagaccagagtcagtcagctgagcgccatccccggcccgaccggacctccc
gtgcagggggtcccctcctcttcatcctcatcctcgtcctcctctgcgcctccgaccacg
ctgcccacctccttcacccctctgcccagctcggtgggcgcagcgctggagctccagctg
cacagcgagaagaccaaggtggcagatctgggccgtcgctgccaggagctggaggtgaag
acggggacgtttgaagacgtggtctgcgtgctaaaccgagaagtggagcgcttcgcaacc
accatggaggccagcaaccgccaacacagactcgatcaggacaaaatcgaggccctaagc
aacaaggtgcgtcagctggagcggcaggtgggcgttaaagacctgactgtggctgaaatg
gagggcagattgcgggagatgtctgccaccacgtttgatggcgtcttcatctggcggata
tcagatttcactaaaaagagacaagatgccattgctggacgggcgcctgccatgttttca
cccgcattttacacaagcaagtacggatataagatgtgcctgcggatttacctgaacggg
gacgggacgggtcgtgggacgcatctctcactgttttttgtggtgatgagaggaacgagt
gacgcactgctcaaatggcccttcaatcagaaggtgacgctgatgctgctggatcagagt
aacagagagcacatcatcgacgcgttccgtcccgacatcacttcctcctcgttccagagg
cctgtaagcgatatgaacattgccagcggctgtccgctcttctgcccgctgtccaagctg
gagggcaagaactcatacatacgcgacgacaccatcttcatcaaagccatcgtggacctc
actggcctttag
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