Carassius gibelio (silver crucian carp): 127957860 Help Entry 127957860         CDS       T08819                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04010   MAPK signaling pathway cgib04137   Mitophagy - animal cgib04141   Protein processing in endoplasmic reticulum cgib04210   Apoptosis cgib04217   Necroptosis cgib04621   NOD-like receptor signaling pathway cgib04622   RIG-I-like receptor signaling pathway cgib04920   Adipocytokine signaling pathway cgib05132   Salmonella infection cgib05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cgib00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     127957860  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     127957860  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     127957860   09143 Cell growth and death    04210 Apoptosis     127957860    04217 Necroptosis     127957860  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     127957860    04622 RIG-I-like receptor signaling pathway     127957860   09152 Endocrine system    04920 Adipocytokine signaling pathway     127957860  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     127957860   09171 Infectious disease: bacterial    05132 Salmonella infection     127957860  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cgib03019]     127957860    04121 Ubiquitin system [BR:cgib04121]     127957860 Enzymes [BR:cgib01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      127957860 Messenger RNA biogenesis [BR:cgib03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      127957860 Ubiquitin system [BR:cgib04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     127957860 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-C3HC4_4 zf-RING_5 Sina_ZnF zf-C3HC4_3 zf-RING_UBOX zf-RING_6 zf-RING_4 zf-RING_2 zf-ACC MATH DEC-1_N ATG16 Motif Other DBs NCBI-GeneID:  127957860 NCBI-ProteinID:  XP_052412531 LinkDB All DBs Position B5:36106154..36115686 Genome browser AA seq 574 aa AA seqDB search MAAQEPSPPSSLEGNKPGFPKKILANKLEDKHLCNICLKILRRPFQAQCGHRFCSYCFNK AVSSGPQKCSACIKEDIFEEPTSILKPGCAFPDNAAKREVEALEAVCINEECSWTGTIKE YEANHEGKCDFRILACPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYMDHIKLCTKFRTPCRFHVVGCDMMVEKEKIHDHEQACS YEHLNLLLHFIMGIKVNLECLQPQSLELASHKIHELHQSLRELELKMGQLSGAGAPVQGA CALLPPPPAPTLGTSFTPLPTAVGAALELQLHSEKTKVAELSRRCQELELKVSTFENIVC VLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEAKMREMSA ATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHL SLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIAS GCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL NT seq 1725 nt NT seq  +upstreamnt  +downstreamnt atggctgcacaggaaccctcaccaccatcttcattagaaggcaacaaacctggcttcccc aagaaaattctcgccaacaagctggaggataagcatctgtgcaatatctgtctgaaaatc cttaggagaccgtttcaggcgcagtgcggacatcgtttctgttcttattgttttaataaa gcagtgagctctggaccacagaaatgcagtgcctgtataaaggaggacatatttgaagaa ccaacatcaattttgaaaccgggctgtgcttttcccgataatgctgcaaaaagagaagtt gaagctcttgaagctgtttgcatcaatgaggaatgcagctggacaggcaccatcaaagaa tatgaggcaaaccatgagggaaagtgtgacttcaggatccttgcctgcccatcatgcaaa gagctcctgagagccaacgaactggaacgtcacaatgagagagagtgcccagaaaggact cttaattgtaaatactgcaaggagccatttcattttaaaaacattaaggcccatgatgag atatgtcctaaatacccaatgatttgtgaaggttgtgccaagaaaaaaattcccagagag aaatacatggaccacattaaactgtgcaccaaattcagaacaccttgcagatttcacgtt gtaggctgtgatatgatggtggaaaaggagaagatccatgaccatgagcaagcctgttcc tacgagcacttaaacctcctattgcacttcatcatgggcatcaaggtgaacttggagtgt ctgcagcctcagagcctggaactggcaagccataagatccacgagctgcaccagtctctg cgggagctggagctgaagatgggccagctgagtggagctggggctcccgtgcagggggct tgtgcgctgctgccgccacctccagctccgacgctaggtacgtctttcaccccactccct acagccgttggggcagccttggagctgcagctacatagtgagaaaaccaaagtggcagag ctcagccgtcgctgtcaggagctggagctgaaggtaagcacctttgagaacatcgtctgc gtgctcaaccgtgagatggagcgctccgccaccaccatggaggcctataaccgtcagcac cggcttgaccaggacaagattgagattctcaacaacaaggtacggcagttggagaggaca gtaggccttagggatctctccatcgtggagatggaggcaaagatgagggagatgtccgct gccacttatgatggtgtatttgtgtggaagatctctgacttctcgaagaagagacaagac gctgtagccggacgggcacctgcaatgttctcgcctgcattttacacaagcaaatatggc tataagatgtgtttgcgcatctatctgaatggagatgggacaggacgtggtactcacttg tctctattcttcgtggtgatgaggggacacagtgatgccttgcttaagtggcctttcaat cagaaggtcaccctcatgttgctggatcagaacaacagggagcacatcattgatgccttc cggccagacatttcctcttcctccttccagaggcctgtgagtgacatgaacattgccagc ggctgccctctcttctgccctctttccaaactagactccaagaactcctacatccgagat gacacaatcttcatcaaggccattgttgacctcacaggcctttaa

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