Carassius gibelio (silver crucian carp): 127960006
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Entry
127960006 CDS
T08819
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
127960006
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
127960006
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
HEAT
Atx10homo_assoc
ARM_LIN_2nd
RIX1
Motif
Other DBs
NCBI-GeneID:
127960006
NCBI-ProteinID:
XP_052415489
LinkDB
All DBs
Position
B6:complement(2862423..2876480)
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AA seq
737 aa
AA seq
DB search
MMPEPLKSALSLGDVEDTSLALPSDRELRSAQQRVLEQVHTIKRSKSKYSSKSVSGLPSP
TSPESDSVFHDFKYSPGASLSGPSFSRGGNMTNGGMQRQGFVRQAANSRSFSGQRVTSGP
SKIDRPFYSATGTLPDQTRTTNQLYSYKSTRSAPDLGFQSTGNTGATATNVRTQTTRQTL
IRVPNTQPAQAYGNGNVPRMPNSNQAGAMQRTVRRPSSLQSNGESRMSMIRTGQAKDISG
MNSEKLLADMTMQDAIEYLFSTDESFQLCGAAYIQHSTFADEKAKQEVLTLKGIPPLVNL
LNSPSPQVQETVAAALRNVVFKNQANKEEVRRCGGITQTVQLLGDTSSETQKHLTGLLWN
LSSADNLKPDLLRIALPVLTEKVIEPFSASSDDNSNSSLAPDVFYNATACLRNLSASKLA
NRHAMRNCKGLIDSLMRYTENCINAGTPDNQSLENCVCILHNLTYQLETEMPTLFTKINA
LASSARNRSSPSETGPIGCFSSQSQKLQQEQSVFDYPVMEDNNPKGAGWLFHSKALQMYL
NLLSTSERDATLEASCGALQNLTATDGLVSNVLSDTIIQKLNGLKYISPLLQSPNAALQK
SAVALIGNLSRSTRTNKTMARQTLPQLVGFLNSGFTKGDSSPEYDSTMATAIHSAHTLMK
ADPEISKSLLNNSLINSFNNMSLNLGLPKSSTAAGVLLHSLWSEKNFQSFLKKQGMIKKS
FVNDTTSAAFRSLQVID
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaaatcggctctgtccctcggagatgtggaggacacgtccctc
gcgcttccgtccgatcgcgagctgagatccgcgcagcagcgagttctggagcaggttcac
accatcaagaggagcaagtccaaatacagcagcaaaagcgtgtctggtctcccgtccccc
accagccctgaaagtgacagtgtttttcacgacttcaagtattctcccggcgcgtctctc
agcggcccctcgttcagcagaggaggaaacatgacaaatgggggtatgcaaagacaaggc
tttgtgcgccaggccgccaactcccgcagcttcagcggtcagcgggtgaccagcggcccc
agcaagatcgatcggcccttctacagcgctacaggcaccctccctgaccaaacccggacc
actaaccaactgtacagctacaaatccactcgcagcgctccagacctgggcttccagtcc
accggcaacaccggggccaccgccaccaatgtacgcacccaaaccaccagacagaccctc
atcagggtgccaaatactcaacctgctcaggcttacggaaatggcaatgtccccagaatg
cctaacagcaatcaggccggcgccatgcaacggaccgtgagacgcccgtcttccctgcag
tccaacggagagtccaggatgtccatgatcaggaccggacaggccaaggacatctctggg
atgaactcagagaagcttctggcagatatgacgatgcaagacgcaatcgagtatctgttc
agcacagatgagagcttccagctgtgtggagccgcttacatccagcacagcaccttcgct
gatgaaaaagccaagcaagaggtgctgaccctgaagggcattcctccactggtcaacctg
ctgaacagccccagtcctcaggtccaggagacggtggccgctgctctgaggaacgtggtc
ttcaaaaaccaggccaacaaagaggaagtgcggcgctgcggaggaatcacacagactgtg
cagctgctcggagacaccagctctgagacacagaaacacctgacaggtctcctgtggaac
ctctcctctgcagataacctcaagccggatttgctccgcatagccttgcctgtgctcact
gagaaagtcatagagccgttttcagcaagttcagatgacaactccaacagcagcctggca
ccagatgtcttctacaacgccacggcatgccttcgcaacctaagcgcctccaaactggcg
aaccgacatgcaatgcgcaactgcaaaggcctcatcgactcactcatgcgctacacagag
aactgtataaatgccgggacacctgacaaccagtctttggagaactgcgtctgcattctg
cacaatctcacctaccagctggagaccgagatgccaactctcttcactaaaataaacgct
ctggccagttctgctcgcaatcgctctagcccttcagaaactggtccgatcggctgtttc
agctcccagagccaaaaactgcagcaggagcagagcgtctttgactatccagtgatggag
gacaacaatcctaaaggtgccggctggctcttccactccaaagcccttcagatgtacctc
aatctgttgagcaccagtgaaagagacgccactcttgaggccagctgtggagcgctgcag
aacctcacagccaccgatggcttggtatcgaatgtattgagtgatacgatcatccagaag
ctcaacggtcttaagtacatcagtccgttgttgcagtcgcccaatgctgctctacagaaa
agtgcagtcgctctgatcgggaatctgtccagatccacacgtacaaacaaaaccatggct
cggcagactctcccgcagctggtcgggttcctgaactcagggttcacgaagggcgactcc
tcgcccgaatacgacagcaccatggccacagctattcacagcgcacacaccctgatgaag
gcggaccccgagatcagcaagagtctgctgaacaacagcctgatcaactccttcaacaac
atgagtctcaatctgggtctgccgaagtccagcactgcagcaggagttctccttcacagt
ctgtggtcagaaaagaattttcaaagtttccttaaaaagcaaggcatgattaagaagtct
tttgtgaatgacacaacgtcagctgctttcagatctcttcaggtgatcgactaa
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