Carassius gibelio (silver crucian carp): 127961336
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Entry
127961336 CDS
T08819
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127961336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgib04052
]
127961336
Cytokines and neuropeptides [BR:
cgib04052
]
Cytokines
Growth factors (RTK binding)
127961336
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
127961336
NCBI-ProteinID:
XP_052416370
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All DBs
Position
B7:complement(14990483..15016739)
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AA seq
293 aa
AA seq
DB search
MGPPVRHYLTAHHSIKFQQVRRVMTILFVTMVISYFSCMRAAPMREIPGVQGGHRAEGYL
GAAAAAAAAITSGSRGHGTPQSGGGLPSLTDTFEQVIEELLEVEGEATQQLGPGADQGQG
GGGPAAMADSKDVDMYASRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPAR
RGELSVCDSISQWVTALDKKTAIDMSGQTVTVLEKVPVTNGQLKQYFYETKCNPLGYTKE
GCRGIDKRHYNSQCRTTQSYVRALTMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaccggtccgacactacctaacagcgcaccacagcattaagttccaacaggtt
agaagagtgatgaccatcctgttcgttactatggttatttcatacttcagttgcatgaga
gctgcgcccatgagagagatcccgggcgtgcaggggggccaccgggctgagggctacctg
ggcgccgctgccgccgccgccgctgccatcacctcaggcagccgaggccacgggactcca
cagagtgggggcgggctgccctcgctcacggacactttcgagcaggtgattgaggagttg
cttgaggtggaaggagaggctacgcagcaactggggcccggggccgaccagggccaagga
gggggcggtcccgcagccatggctgactcgaaggatgttgacatgtacgcctcgcgggtg
atgatcagcaaccaagtgcctttggagccgccgttactctttctcttggaggaatacaaa
aactacctagacgccgccaacatgtcgatgcgcgtgcggcggcactcagaccccgcgcgg
cgaggggagctcagcgtttgtgacagtattagccagtgggtgacggctctggacaaaaag
acagccatagacatgtcgggccagacggtcaccgtcctggagaaggtccccgtgactaac
ggtcagctgaagcaatacttttacgagaccaaatgcaaccccttagggtacacaaaggag
ggctgccgaggaatagacaagcggcactataactcgcaatgccggacaacccagtcttac
gtgcgagcccttaccatggatagcaaaaggaagatcggctggcggtttatacggatagac
acttcgtgtgtatgcacattgaccattaagaggggcagatag
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