Carassius gibelio (silver crucian carp): 127961585
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Entry
127961585 CDS
T08819
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127961585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127961585
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127961585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
WHD_NOD2
LRR_4
AAA_16
nSTAND_NTPase5
AAA_29
AAA_22
AAA_30
T3RM_EcoP15I_C
Viral_helicase1
nSTAND3
T2SSE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
127961585
NCBI-ProteinID:
XP_052416718
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All DBs
Position
B7:complement(18148189..18155042)
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AA seq
982 aa
AA seq
DB search
MTAHQLILKQRAELLAVLCGGGNAEPLDCVLDLLLACEVLVWEDYLSIRVAEKPLCSNVR
HLLDVVYDKGEDACSLFLAAMNQVVPEEQKAGLCFGKECAVVEKNRPDTATLTLLADRPV
LVRKLRDNIDGALNALLTTGCFTIKDCDAVQLPVYTPSQQVRRLLDQVRFKGETAAKTLL
QYLEQTETTRPNPEDKENHLSANCLLYQKKLRSSVAAQSHSLSTYGGTGRFSLDDIYTDG
LLEVIDGSGETLTLGLEDVVGPLGTLNEEADTVLVSGEAGSGKSTLLQRLHLLWAREALL
TNTFLLFPFSCRKLNAEQRELSLKELLFLHCCWPDRGQDEVFQFILDHPNLALFTFDGLD
EFKQGFTDEERHCCPTKQVPIPVLLFNLLQGTLMKGVMKVATSRPQAVGPSLKRYLRKEV
LLKGFSPGGIDCFVKKHHSDPAMARRVIESLQANTVLLSLCHIPVFCWIVTKCHQELLGG
QDVITQTITDVYLLVLQHFFQRKSPQSQGVLGKAWLEEHLDTVLKLGQLALEGLEASCYV
FSGYELQRNGLTEKEVSLGFLIYCNDLSVTDCKRYEFLHITLQCFFAALYVVLNRNIDRS
AVSRLFHPQYRQLSGLSQRCLGHCIDSSVEELESHVAETPNLQITAQFVSGLLSQRHHDL
LLECCPIAVRERKVKQVVKSLSKGMQRHFKSIPRPVEGEKKSMHAMPSFVWLIKCIYEMQ
DNSIAQDTMAKLDVEHLKLTYCNIGPVECTALAYVLKYLRNPVGLQLDNNSVGDVGAEQL
LPCLHICHSLYLRNNNISDEGIRKLLEKGMKCENFQKIALFNNNLTDACTQHFALLLKSK
QNFLSLRLGNNNITSQGAEQLAEGLSYNQSLQFLGLWGNKIGDRGAEALAAALKNSTTLI
WLSLVDNGVGSAGACALAKLISQGKTLEQLWLNKNCINREGVECLIEALKMNSSVQEVWL
RGNNLSPEEEEELSKQESRLIF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaccagttgatcctaaaacaacgagcagagcttctggcggtcctgtgtggt
ggaggcaatgccgaacctctggactgtgttctggacctgctcttggcttgtgaggttctt
gtctgggaggattacctaagcatacgagtggcggagaaacctctatgttccaatgtcagg
cacctattagatgtggtgtatgataaaggagaagatgcttgcagccttttcttggctgcg
atgaaccaggtcgtacctgaggagcagaaggctggcctgtgttttgggaaagaatgtgct
gtggtagagaagaacagaccagacactgcaactttaacgctactggctgacaggccagtg
ttagtgagaaagctcagagataatattgacggagcactgaatgctttattgacaactggc
tgcttcaccattaaagattgtgatgcggtgcaactacctgtatacacaccctcacaacag
gttcggcggctgttagaccaagtgaggtttaaaggggaaactgctgcaaagaccttacta
cagtatctagaacaaacggagacaaccagaccaaaccctgaagataaagaaaatcatctt
tctgccaattgtctgctctaccagaagaagctgcgaagctctgttgctgcccagtcccat
tcccttagcacctatggtgggacaggacgtttctccttggatgacatttacaccgacggt
cttcttgaagtgatcgatggctctggtgaaactcttacgctagggctggaggatgtggtg
ggtcccttggggactcttaatgaggaggctgacaccgttcttgtgtctggggaggcagga
agtggcaaaagcacactgctccagcgactgcacttgctctgggcaagagaagctttgctc
acaaacactttcctgctgtttcccttcagttgccgcaagctaaacgcagagcagagagaa
ctgtctctgaaggagctccttttcctgcactgctgctggcctgatcgaggtcaggatgag
gttttccagttcatcctagaccatcctaatttggctctctttacctttgacgggctcgat
gagtttaaacaggggttcacagatgaagagcgccactgctgccccacaaagcaagtgcct
atacctgttctgcttttcaatctgctgcagggtacgctaatgaagggggttatgaaggtg
gccactagcaggccacaggctgtaggcccatcactgaagcgctatctccgcaaagaagtg
ctcctgaagggtttttctcctggagggattgactgctttgttaagaagcatcacagtgac
cctgctatggctagacgtgtcatagagtccctccaggctaacacagtgttattaagtctt
tgccacatcccagtcttctgctggattgtgaccaagtgccaccaggagcttctaggtggt
caagacgttattacccagacgatcactgatgtctacctcctggttttacagcatttcttt
cagcgaaagtcacctcagtcccaaggagtcctgggaaaggcctggttggaggaacatttg
gacacagttttaaaacttggacagctggcactggaaggtcttgaagcctcttgttatgtg
ttctcaggatatgagctccaaagaaatggactgacagaaaaggaagtcagcctgggtttt
ctcatttactgcaatgacctatctgttacagactgtaaacgctatgaatttctgcacatc
accttacaatgcttcttcgctgctctctatgtcgttctcaatcgtaacatcgatcgttct
gctgtctccagactctttcatccccagtacaggcagttgtcaggtctgtctcaaagatgt
ctgggacattgtattgacagttctgtagaggagctggaatcccatgtggcagagacacca
aacctccagattacagctcagtttgtgtcaggacttttatcccagcggcaccatgatctc
ttgctagaatgctgtcctattgctgtgcgggaacgcaaggtaaagcaggtagtgaagtct
ttgtctaaaggtatgcagaggcatttcaagtccattcctcgtcctgtagagggtgaaaag
aagagcatgcacgccatgccaagttttgtttggctaattaagtgcatctatgaaatgcaa
gacaacagtattgctcaagataccatggctaagttggatgttgagcacctgaagctcacc
tactgtaacattggtcctgtggaatgtactgcgctggcgtatgtgctgaagtacctgcgg
aatcctgttgggctccagttggacaacaattcagtgggagatgtgggcgcggagcagctt
cttccatgtctacatatttgtcactccctttatttaaggaacaataacatatcagatgaa
ggaatccggaaacttctggaaaagggaatgaagtgtgaaaacttccaaaaaatagcgctt
ttcaacaacaacctcacagatgcttgcacccaacactttgctttgctgttaaaatcaaag
cagaactttctgtctttgaggcttggaaacaataacatcacgtcgcagggagcagaacag
ctggcagaaggcctaagctacaaccagtctttgcagtttcttggattatggggtaataaa
attggggataggggagctgaggcattggcagctgcactgaaaaatagcacaacgctaata
tggctaagtctggtggataatggcgtgggcagtgcaggtgcatgcgctctggctaaactc
atcagtcagggcaaaactctggagcaattgtggctaaacaaaaactgtatcaacagagag
ggggttgagtgtctaatagaggcactgaaaatgaactctagtgttcaggaagtgtggctg
agaggaaacaatctgagcccagaggaagaggaggagctgagcaagcaagaaagcagattg
atcttctga
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integrated database retrieval system
