Carassius gibelio (silver crucian carp): 127961861 Help Entry 127961861         CDS       T08819                                  Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04010   MAPK signaling pathway cgib04120   Ubiquitin mediated proteolysis cgib04140   Autophagy - animal cgib04144   Endocytosis cgib04620   Toll-like receptor signaling pathway cgib04621   NOD-like receptor signaling pathway cgib04622   RIG-I-like receptor signaling pathway cgib05132   Salmonella infection cgib05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cgib00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     127961861  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     127961861  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     127961861    04140 Autophagy - animal     127961861  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     127961861    04621 NOD-like receptor signaling pathway     127961861    04622 RIG-I-like receptor signaling pathway     127961861  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     127961861   09171 Infectious disease: bacterial    05132 Salmonella infection     127961861  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cgib04131]     127961861    04121 Ubiquitin system [BR:cgib04121]     127961861 Enzymes [BR:cgib01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      127961861 Membrane trafficking [BR:cgib04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     127961861 Ubiquitin system [BR:cgib04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     127961861 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 DM TRAF3_RING TRAF6_Z2 zf-TRAF_2 RING_XB3-XBAT31 Sina_ZnF U-box ATG16 Motif Other DBs NCBI-GeneID:  127961861 NCBI-ProteinID:  XP_052417095 LinkDB All DBs Position B7:complement(21219358..21226335) Genome browser AA seq 543 aa AA seqDB search MACSDMEKLSLDVEPYCDSELSGCAAAMEKERESYLSPTESTSTISVSASIPPDQQGYDV EFDPPLESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLLEEQLF PDNFAKREILSLTVRCPNEGCSDKMELRQLEKHSSQCKFATVQCPQCLESVRKSHLDEHK SEQCLQRRMTCPACAGSFVFANKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKA PVACTFSTFGCHVKMPRNELAQHMQEFTQMHMRCMAEFLRSQTLSSCPVPSVGAHSSSDE RGASARAPDSCQCRQELMNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELRRKLS TLEDATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHL QTPSAPRCSNYISLFVHTMQGEFDSQLSWPLQGMIRLAVLDQVEGNHHVEVMETKPDLQA FQRPTVQRNPKGFGYVTFLHLQALRQRGYMKDDVLLVRCEVTPRFDASLRREGVQPRGSE PSL NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atggcttgcagtgacatggagaagctcagccttgatgtggagccctactgtgatagtgag ctctccggttgtgcagcagccatggagaaagaaagggagtcctatctgagccccacagag agcacctccaccatcagtgtctccgctagtatccctccagaccagcaaggctatgacgtg gagtttgaccctccgctagagagcaagtatgagtgccctatctgtctgatgggtcttcgc tcggctgtacagactccatgtggacatcgattctgcaactcgtgcatcaagaagtccatc agggacacggggcagaaatgtccagttgacaatgaggtgctgcttgaggaacagctcttc cctgataactttgccaaacgagagatcctctcacttactgtccgatgtcctaatgaagga tgcagtgataaaatggaattgcgccaactggagaaacactcgtctcagtgcaagtttgcc acagtgcagtgtcctcagtgtctggaatctgttcgtaagagccatctggatgaacacaag agtgagcagtgtttacagcggcgtatgacctgccctgcctgtgcagggagcttcgtgttt gctaataaacagattcatgaacagatttgtcctttcgccaatacagtgtgtgaatattgc gaaatggaacttattcgggatcagttggccttgcactgtgacacagactgtctgaaagct cctgtggcctgtactttcagtacttttggttgtcatgtgaagatgccaagaaatgaactg gcccagcacatgcaggaatttacacagatgcacatgcgttgcatggctgagtttctgcgt agccagactcttagtagctgcccagtgccctcagttggtgcccactcttcgtcagatgaa cgtggggcctctgcccgagccccagattcgtgccagtgtagacaggagctgatgaacctg cgtgaaacggtcttggagctggagggccgactggttcgtcaagatcaacagatccgcgag ctgtgcatccacaatgagacacagaaaaaccaggtcacagagctacgccggaagctgagc acactggaggatgccacccgagagctggaagcccagcagtatcaaggtgtctacgtatgg cgcttggagaacttctcacttcacctgcgcaaccaagaagccggtcaacccatagtcctc cacagcccacctttctacacgggccggccagggtacaaactctgcctacgactgcatctc caaactcccagcgccccacgctgttccaactacatctcacttttcgtgcacactatgcag ggtgagtttgacagccagctctcctggcccttgcagggcatgatccgactggcagtgttg gaccaggtcgaggggaatcatcacgtggaagtgatggagaccaagccagacctgcaggcc ttccagaggcccactgtgcaacgcaaccccaagggtttcggctacgtcactttcctgcat ctacaggctttgcggcagcggggctatatgaaagacgacgtgctgttggtgcgctgtgag gtcacgccacgattcgacgctagcctcaggagggaaggggtccaacctcgggggtcagaa ccttcactttga

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