Carassius gibelio (silver crucian carp): 127961992
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Entry
127961992 CDS
T08819
Name
(RefSeq) oxysterols receptor LXR-alpha-like
KO
K08536
liver X receptor alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03320
PPAR signaling pathway
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127961992
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127961992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127961992
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127961992
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127961992
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
127961992
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
127961992
NCBI-ProteinID:
XP_052417298
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Position
B7:complement(16350576..16367048)
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AA seq
441 aa
AA seq
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MSTLSTTDITDVGHGDSLCCASEEGPSAATAEVKQEIVSQTASYGTSHNELNEPLLMEPG
DIKMYPTEDTPAPEGHPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRR
SVIKGAQYTCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQEE
ETARTSAVPTPSPAPEMLPLAPEQQEMIEKLVSMQKQCNKRSFLDRPRVTPWPQSQDPLN
REVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRY
NPAIESITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAINIFS
ADRPNVQDHELVERLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctttctacgactgatatcactgatgttggtcatggggactctctgtgctgt
gccagtgaagaggggccttcagcagcgacagcagaagtgaaacaggagattgtcagtcag
acggcctcatacggcacctcacacaatgagctgaacgaaccgctgctcatggagcccggc
gacatcaagatgtaccccaccgaggacacacctgcaccagagggtcacccagtcaagaga
aagaaaggccctgctcccaagatgttggggaatgaggtgtgtagcgtatgtggagacaaa
gcttctggctttcattacaatgtgctgagctgtgagggctgtaaaggtttcttcagacgc
agcgtcatcaaaggagcgcaatacacctgcaaaaattcgggccgctgcgagatggacatg
tacatgcgccgcaagtgtcagcagtgccgtctgcgcaagtgcagggaggccggcatgctg
gagcaatgtgtgctctcagaagagcagatccgactaaaaaagatgaaaaaacaggaagag
gagacggcacgtacctctgcagtcccaacccccagccctgctcctgagatgctccctctg
gctcctgaacagcaggagatgatcgaaaaactggtgtccatgcagaaacagtgcaacaaa
cgctcttttctcgaccggcccagagtcactccttggccacagagtcaggacccacttaac
cgagaggttcgacagcagcggtttgctcatttcactgagctggccatcatgtccgtgcag
gagattgtagactttgctaaacagctgcctggcttcctggagctcacccgagaggaccag
atcgccctgctgaagacctcaactatagagatcatgctgctagagacttccagacgttat
aacccagcgatagagagcatcacctttctcaaagacttcagttataataaggaagatttt
gccaaagcagggctgcaatttgagttcatcaaccccatctttgagttttcaaaaggcatg
aatgacctccacctggatgaggcggagtacgctttgctcatcgctatcaacattttctca
gcagaccgaccgaacgtgcaggatcatgagttagtggaaagactacagcagccatatgtg
gacgctctccactcttacatccgaataaaacgacccaacgatcatctgatgtttccccgg
atgctgatgaagctggtcagcctgcgcacactgagcagcgtccactcagagcaagtcttc
gctctgcgcctccaagacaagaaactcccacctctgctttctgaaatctgggatgtccac
gagtga
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