Carassius gibelio (silver crucian carp): 127962241
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Entry
127962241 CDS
T08819
Name
(RefSeq) transcription factor p65-like
KO
K04735
transcription factor p65
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04137
Mitophagy - animal
cgib04210
Apoptosis
cgib04218
Cellular senescence
cgib04519
Cadherin signaling
cgib04620
Toll-like receptor signaling pathway
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04623
Cytosolic DNA-sensing pathway
cgib04625
C-type lectin receptor signaling pathway
cgib04920
Adipocytokine signaling pathway
cgib05132
Salmonella infection
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127962241
09133 Signaling molecules and interaction
04519 Cadherin signaling
127962241
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127962241
09143 Cell growth and death
04210 Apoptosis
127962241
04218 Cellular senescence
127962241
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127962241
04621 NOD-like receptor signaling pathway
127962241
04622 RIG-I-like receptor signaling pathway
127962241
04623 Cytosolic DNA-sensing pathway
127962241
04625 C-type lectin receptor signaling pathway
127962241
09152 Endocrine system
04920 Adipocytokine signaling pathway
127962241
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127962241
09171 Infectious disease: bacterial
05132 Salmonella infection
127962241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127962241
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127962241
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
127962241
NCBI-ProteinID:
XP_052417741
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All DBs
Position
B7:complement(1808819..1820469)
Genome browser
AA seq
538 aa
AA seq
DB search
MDGLFQQWGASLVSQGHPFVEIIEQPKARGMRFRYKCEGRSAGSIPGEKSNDTTKTHPAI
KVHNYSGPLRVRISLVTKNQPYKPHPHELVGKDCKHGYYEADLQERRIHSFQNLGIQCVK
KKDVGDAVSCRLQTQNNPFNIPEPKIWEEEYDLNAVRLCVQVSITLPSGELFPLEPVVSQ
PIYDNRAPNTAELKICRVNRNSGSCRGGDEIFLLCDKVQKEDIEVRFFQDSWESKGSFSQ
ADVHRQVAIVFRTPPYRDPNLTEPVRVKMQLRRPSDREVSEAVDFQYLPADPDEHRLMEK
RKRTEGMLQNLKLSSIITGSSVPADRRPFSTAKRTLGLSKPPAASGLSAAASAGVSVNSS
FFSPAPGQLFTQSSLKPDPSSSGDSWKFLQSLTVDSQPAPAVFLNQSVPQDFPTVNLSDL
QDFPLSSFVPAEPPSAPSTAPQDAFSDELTDFSSFSEVDFQALLGEARAVDDPPGGSGST
WMSIPPSIASLIHSEGLQENTPHTVLDDLEVLSSIDDDRFMSILSSSNQVGFLSGHPS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggactgtttcagcagtggggagcgtccctggtgtcccaaggccatccgttcgtg
gagatcatcgagcagccgaaagcacgagggatgcgtttccgttataagtgtgagggtcga
tcggccggcagcatccctggagagaagagcaacgacaccacgaaaacacaccccgccatc
aaggtgcacaactacagcggcccgctgagagtcaggatctcattggtcaccaagaaccag
ccgtacaagccacacccacacgagctggtgggcaaagactgcaaacacggatactatgag
gcggacctacaggagcgccggatacacagtttccagaatctggggattcagtgtgtgaag
aagaaggatgtgggagacgcagtttcctgtcgcctgcagacacagaacaacccctttaat
attcctgagcccaagatctgggaggaggagtacgatctgaacgcggtgcgactgtgtgtc
caggtgtccatcacgctgcccagtggagagctgtttcctctggagcccgtcgtctctcag
cccatctacgacaaccgcgctcccaacacggccgagctcaagatctgtcgggtcaacagg
aactctggcagctgccgaggaggagacgagatcttcctgctgtgtgataaagtgcagaag
gaggacatcgaggtgcggttcttccaggactcgtgggagagcaagggctcgttctctcag
gctgatgttcaccggcaggtggctatcgtcttccgcacgcctccgtaccgtgacccgaac
ctgacggagccggtgcgtgtgaagatgcagctgcgcagaccgtctgaccgagaggtcagc
gaggccgtggacttccagtacctgccggccgaccccgatgagcacagactgatggagaag
cgcaagagaaccgaagggatgctgcagaacctcaaactgagcagcatcatcacaggatcc
tctgtgcccgcagacagacggccgttcagtacagcgaagcgaacactaggtctctctaaa
cccccagcagccagcggtctctcagcagcggcgtctgcaggtgtgtcggtgaactcctcg
ttcttctctcctgctcctggtcagctgttcactcagagttcactcaaaccggatccgtcg
agctccggtgactcgtggaagttcctgcagagtctgacggtggactcccagcctgcgcct
gcggtgttcctgaaccagagcgtcccgcaggacttccccacggtcaacctgtctgacctg
caggacttccccctgagcagcttcgtcccggccgagcccccgagcgccccgagcaccgct
ccccaggacgccttcagcgacgagctaacagacttctccagcttctccgaggtggacttc
caggcgctgctgggcgaggccagggctgtggacgaccccccggggggcagcggctccacc
tggatgtccatccctcccagcatcgccagcttgatccacagcgagggcctgcaggagaac
accccccacacagtcctggacgacctggaggtgctcagctccatcgacgacgaccgcttc
atgtccatcctgtccagctcaaaccaggtgggcttcctgtccggacaccccagctag
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