Carassius gibelio (silver crucian carp): 127962535
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Entry
127962535 CDS
T08819
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cgib04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127962535
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127962535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127962535
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Nectin family
127962535
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
Ig_2
C2-set_2
TMEM154
Ig_6
Protocadherin
DUF7237
DUF5305
Motif
Other DBs
NCBI-GeneID:
127962535
NCBI-ProteinID:
XP_052418098
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Position
B7:6331007..6346937
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AA seq
617 aa
AA seq
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MKTVSYFLAALIIWNSAACVSGEQEHFLEPTESPWTLQCLAEEETRLPCRFDASNSNVVQ
VIWIRLDSNGGEEQVITAHQKDGQNESPAYRGRARFATSNPIEDSALILMGTRSADEGKY
ICKIATFPNGNFQTEILVTVWTKPITSLQPFVLVEGESFRPAAVCRSVAKPMAGLSWDTE
LAGQSQNRSLDSEVASIQFSLHPLRNMNGQKLDCLVWHPSQKGPVRISNNLVVHYPPNAL
ISGYEDNWYAEMQEATLQCSGQGNPEPQRFSWMRKDEALPEGVTMEGGTLRFSRPLSLTD
QGVYVCTATNEVGSGKAEILINISESPPKNASVNYVMMIIIAGVAAVIVLTLIIVIISVK
RYYKRKNQQLAIELVAKKEEISTLSRQASIRRVNSGSNRYSDDNNPLRAEGTIRTSLSSL
DRPRSRDSRSTLGGVDSLGRPAIYNTSRRGRDKIMDRTEKETRLMMESYEQDSNLSQETQ
LLPPLHPSSYSMEQAVEIVRSRNGSAILPAEGRPQSGGSTRGGSRGHNSPLVSMYPTLTD
EEEEDSVSPTDSGVHRGLMEPDGFENGGSDISEALSSHFERTNGTLWPKSKPNNILLPAK
TKLFLPHSPTIHKAQIV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagtttcatattttcttgctgcgttgatcatctggaactcagcagcctgtgta
agtggagaacaagaacattttctagagcccacggagtccccctggactctgcagtgtttg
gcagaggaggaaacgcggttaccctgtcgattcgatgcatcgaacagtaatgtggtgcag
gtgatctggattcgactagactcaaatggaggtgaagaacaggttatcactgctcatcag
aaagatggccagaacgaaagccctgcatacagaggccgtgctcgattcgctaccagcaac
ccaatagaagactctgctctgattctcatgggcacacgttctgcagatgagggcaaatac
atctgcaaaatcgccaccttccccaatggaaactttcagacagagattttggttacagtg
tggactaaacccattacgtccctgcagccgttcgtcctggttgagggtgagtcgttccgt
ccggccgctgtatgccgttcggtggctaagccgatggcaggcctctcctgggacacggag
ctcgcgggtcagagtcagaaccgtagcttagatagtgaagtggcctccatccagttttct
ctccaccctctccgtaacatgaacgggcagaagctggactgtctggtctggcatccatcg
caaaaaggcccagtgaggatctccaataaccttgtagtacactaccctccgaatgcactg
atatctggctatgaggacaactggtatgccgaaatgcaagaagccacgctgcagtgcagc
ggtcaaggaaatccagaacctcagagattcagctggatgaggaaagatgaagctctaccc
gaaggtgtgactatggaaggaggcactctgcgcttttccagacccctgagcttgaccgat
caaggagtttatgtctgtaccgccaccaatgaggtgggatctggaaaagctgagattcta
ataaatatatcagagtcgcctccgaaaaacgcatctgtgaactatgtgatgatgattatt
atcgctggtgtcgctgcagtgattgttctcactcttatcatagtgatcatttcagtgaag
cgctactataagcgcaaaaatcaacaactggctatagagctggttgcaaaaaaggaggaa
atcagcactctgtcaagacaagcctcaattaggagagtcaactcaggaagcaacagatac
tcagatgataataatcctttgagagctgaagggacgatacgcacaagtctctcttcactg
gatcgtcctcgctccagggacagtcggtccacgctgggaggggtggactcactcggtcgt
cctgcaatttataacacgtccagaagaggtcgagacaaaatcatggacagaactgaaaaa
gaaactcggctgatgatggagtcttatgagcaggacagtaacttgtcacaggaaacccaa
cttcttcctcctctccacccctcttcttattcaatggagcaggctgttgaaattgtgcgg
tctcggaacggcagcgccattctcccagcggaggggaggccgcagtcaggaggaagtacc
agagggggcagcagagggcataattcgcccttagtatccatgtacccgactcttacagat
gaggaagaggaagattctgttagtcctacggattcaggagtccacagaggtttaatggag
cctgatggatttgagaacggtggcagcgatatatctgaggcgctatccagtcattttgag
cgcactaatggcacactgtggcccaagtcgaaacccaataacatcctgctcccagccaag
acaaaacttttcctgccgcatagcccaactatccacaaagctcagatcgtttag
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