Carassius gibelio (silver crucian carp): 127963132
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Entry
127963132 CDS
T08819
Name
(RefSeq) plexin-D1 isoform X1
KO
K06822
plexin D
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
127963132
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Ubiquitin_TPR1
RAMP
Motif
Other DBs
NCBI-GeneID:
127963132
NCBI-ProteinID:
XP_052418826
LinkDB
All DBs
Position
B8:30798823..30861454
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AA seq
1895 aa
AA seq
DB search
MPPSPADRRSLRLLAAALAVFLTALHARTAGALQIQQAFASPSRTNNFVVDAVSRRVYLA
AVNSLYQLNATLSREVETHTGPVLDNPLCHAPQLPQAMCEHQKTLTDNHNKLLVLDREQG
VLLACGSVFQGFCELRAMDNASLLAVRFPQNGTTVFPSMLNIAANHENASTVGLIFRSHG
GAPRLLVAATFTGMGSEYFPKNHSKEDLRFENTPEIAIRSLDTANLGRLFTYDINPSEDN
VFKIKQEVKQKNKLSFVRAFVHKSYSYIAINNDANAGVKESQPNSILARICLDTDAPRRS
AESRKLTESYIQMGLQCGSNENIYNRLLSICPGDISGAAGPEPHLFGVFARTGGQTAVCA
FRVLEVEERIRYGRSNCSSGRNSNVHVLDSVIQGSGAECESKGPIMLQEEQLNCGAAHLQ
HPLALRRPLRAPPIYEAPGLSSIAVDNVHNRTVVFLGTSRGRLRKLSLLANLSVANQWSL
KLTANEPVHHIMTFDPSDHNYLYLMTTHHLLRVQVSACGQLSSCSECVSAGDAHCGWCTL
EGRCTVQKNCSSGTLGRSWISTGDGVQQCPSMTITPSEISRSTHTRDVGILINGSVPDLQ
GLQVECDYGMGITTNATVHLDYGTTQIQTCPLPPPHMYPRIPFDTDHVTIPVAIRVNNVS
VVSGNFTIYECNRTGQIHFKTACTSCLSRAWRCYWDPQLNLCVSSKDSTPHVLLENSSSC
PRMVAHDVPPLASGSTHVFSLELQNIEHGTELDCDLGDGHLYRAQWLDGLAVNCSGVTLK
TTMWSKTFQLSLRRRGSGTYIDSPEPMTVEVYSCGVGDSDCSQCWGRQTQGHMCVWCDNS
CQQRDQCHSITTRCPDPHIQKVEPLSGPLTGGTLLTVQGRNLGHNTTQLNVSIGRVPCRV
LPQYYTVSVRLVCETDASREEMSDHVTVSVAGNSVGVSKDIFSFVEPSLLEFSPRQGPVA
GGTRLTIRGQFLDAGSTVNVKINQTQSCTVFMLSRDVIECVMPPAEAAVAENVSVCVVYD
GQPCFSTSPRFTFTYEKNPTISHIRPNKSFLSGGRSISVTGYGFDLVQSVRMEVSGVGQT
SCSCVSPTLIVCQSPAANQSQQATALFYLNEVLYRGEDTSPSGRGPDEDEQPHADAFHFE
YVEDPQFYTANKEKLIKHHPGEPLILIINKGPSELDLTLQEYSVTIGSDLCDITFHNEQL
FHCTINRSLSVSSGELPVTVHVGHFVKVIALVQMGGGSELAIIVSIVVCCVLLLLCTVAL
VVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELGRTQGIPFLE
YKQFVTRTFFPKMCSDYERSLVQPVYENDPLGPRALSETHPLLQDWQSSNSVRPNLEEGI
TLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKELLVDL
IDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINKGSI
DAITGKARYTLNEEWLLRENIEAKPQNINVSFQGFGMDSVIVRVMNTDTIGQLKEKILEA
FYKNLPFSQWPREEDVDLEWFPVGRSSRILQDLDDSSVMEDGRKKLNTVFHYQIPDGASL
AMSMKDKRENTLGRVKDLDTDKYVHLVLPHDELTESRKSHRHSHRKKVLPEIYLTRLLST
KGTLQKFLDDLFQAILSIPPEKPPLAVKYFFDFLEEQADKRGITDPDTLHIWKTNSLPLR
FWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPE
YKKRVQCYYQQIQEMAALSEQEMNAHLAEESRRYRNEFNTNLAVMEVYKYAKRYRNQVVS
ALDSSPTARRTQLQQKFEQVIALVEDNIYECCSEA
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttctccagcggacagacgctctctgcggctcttagcggcggctctcgccgtg
tttctgacggctctccacgcgcgcacggccggcgcgctccagatccaacaggcgttcgcg
tctcccagccgcaccaataacttcgtggtggacgcggtgtcgcgtcgcgtttacctggcc
gcggtcaacagcctgtaccagctgaacgccacgctctccagggaggtggagacgcacacg
ggaccggtgctggacaacccgctgtgccacgcgccgcagctgccgcaggcgatgtgcgag
caccagaagactctcaccgacaaccacaacaagctgctggtgctggaccgcgagcagggc
gtgctgctggcctgcgggtcagtgttccagggcttctgcgagctgcgcgccatggacaac
gcgtcgctgctggccgtcaggttcccgcagaacggcaccaccgtgttcccgagcatgctc
aacatcgcggccaaccacgagaacgcgagcaccgtggggctgatcttccggagtcacggc
ggcgcgccgcggctgctggtggcagcgaccttcacgggcatggggagcgagtatttcccc
aagaaccacagcaaagaggacctgcgcttcgagaacacgcccgagatcgccatccgctcg
ctggacaccgcgaacctcggccggctcttcacctacgacatcaacccgtccgaggacaac
gtgttcaagatcaagcaggaggtcaagcagaagaacaagctcagcttcgtgcgcgcattc
gtgcacaagagctactcatacatcgccatcaacaacgacgcgaacgcgggagtgaaggag
agccagcccaacagcatcctggcgcgcatctgtctggacacggacgcgccgcgcaggtcc
gcggagagccgcaaactcaccgagtcctacatccagatggggcttcagtgcggctccaac
gagaacatctacaaccgcctgctctccatctgccccggggacatcagcggcgcggcgggc
ccggagccacatctgttcggggtgttcgcgcggacgggcggtcagacggctgtgtgcgcc
ttccgcgtgctggaggtggaggagaggatccgctacggtcgcagcaactgctccagcggg
cgcaacagcaacgtgcatgtgctggacagcgtcatccagggctccggggccgagtgcgag
agcaaggggcccatcatgcttcaggaggagcagctgaactgtggagccgctcacctgcag
cacccgctggccctgaggaggcccctgagggccccacccatctacgaggccccgggcctc
agctctattgctgtggacaacgtccacaaccgcaccgtggtgttcctggggaccagcagg
ggccgactgcgaaagctgtctctgctggctaacctgtccgtggctaatcagtggtcacta
aaactgaccgctaacgaacccgttcaccacatcatgaccttcgaccccagcgaccacaac
tacctgtacctgatgaccacacaccacctcctgcgggtccaggtgtctgcgtgtggacag
ctcagctcctgcagtgagtgtgtgagcgccggtgatgctcactgcggctggtgcacgctg
gagggaaggtgtacggtccagaagaactgctccagcgggactctgggacgctcgtggatc
agcacaggggacggagtccagcagtgtccctccatgaccatcacaccctcagagatcagc
cgctccactcacacgagggacgtggggatcctgatcaatggcagtgtgccggatctgcag
ggtctgcaggtggagtgtgattatggcatgggaatcaccacaaatgccaccgtacatcta
gactatggcaccacccagatccagacctgccctcttccacccccacacatgtatcccaga
attcccttcgacacagatcacgtcaccatccccgtggccatcagggttaataatgtttct
gtggtttctggaaatttcaccatttatgagtgtaatagaacaggacaaatccacttcaaa
actgcgtgcaccagctgtctgagcagggcctggcgctgttactgggacccgcagctcaat
ctgtgtgtttccagtaaagacagcactcctcatgtccttctggagaactcctcgtcctgt
cccaggatggtggcccatgatgttcctccactggcttctggaagcactcatgtcttctcc
ctggagctccagaacatagagcatggcactgagctggactgtgatttgggagatggccat
ctgtacagagcgcagtggctggacgggctggcagtgaactgcagtggagtgaccctaaaa
actacaatgtggagcaagacattccaactgagtctgcggagaagaggatccggcacatat
atagacagtccagagccaatgacagtggaggtgtacagctgcggcgtgggcgacagcgac
tgctctcagtgttggggccgtcagacgcagggccacatgtgtgtctggtgtgataacagc
tgtcagcagcgggaccagtgccactccatcaccacacgctgcccagacccacacatacag
aaggtggagccgctgtcggggccgctgaccggcgggacgctgctcacggtgcagggcagg
aacctcggacacaacaccactcagctcaacgtctccattggccgtgtgccctgcagagtg
ctgccacaatactacactgtctcagtcaggttggtttgtgagactgatgcatcgcgggaa
gagatgagcgatcatgtaaccgtgagcgtggctgggaactctgtgggcgtttcaaaggac
atcttctcctttgtggagcccagtctgctggagttcagtccgaggcagggtcccgtcgct
ggaggaaccagactcaccatccgtggtcagttcctggacgctggatccactgtcaacgtc
aagatcaaccagactcagagctgcaccgtcttcatgctgtctagagacgtcatcgagtgt
gtgatgcctccagccgaagcggccgtcgctgagaacgtgtccgtgtgtgtggtgtatgac
ggccagccgtgcttcagcacttcacccagattcacattcacctacgagaagaaccctact
atcagtcacatcagacccaacaaaagcttcctcagcgggggtcgcagtatctccgtcact
ggatacggcttcgatctggtgcagtctgtcaggatggaggtgtctggagtcggacagacg
agctgctcctgtgtgtcacctactctgatcgtttgtcagtctcctgccgccaatcaatcc
cagcaggccacggctctcttctacctcaacgaggttctgtacagaggagaggacacgtct
ccatcaggacgagggccagacgaggacgagcagcctcacgctgatgcctttcactttgaa
tatgtggaggatccacagttctatacggccaacaaagagaaactcatcaaacatcatcct
ggagagcccctcatcctcatcatcaataaagggccaagtgagctggacctgacactgcag
gaatactctgtgacgattggttcagacctctgtgacatcaccttccacaacgagcagctg
ttccactgcaccatcaacagatccctgagcgtcagcagcggggagctgcccgtcactgtg
catgtgggtcacttcgtgaaggtgatagcgttggtgcagatgggtggaggcagcgagctg
gccatcatcgtctccatcgtggtgtgctgtgtgctgctgctgctgtgcactgtggcgctg
gtggtttactgcactaagagccgcagggcagagaggtattggcagaagactctgttacag
atggaggagatggagtcacagatccgtgaggagatacgcaaaggttttgcggagctgcag
actgatatgacggacctgaccaaagagctgggccgcacacagggaatccccttcctggag
tacaagcagttcgtcacgcgcaccttcttccccaagatgtgctctgactacgagaggagt
ctggtccagccggtgtatgagaacgatcctctgggtccacgagctctgtctgagactcat
cctctgctgcaggactggcagtcgtctaacagtgtgcggccgaacctggaggagggaatc
acgctgttttccactcttctcaacaacaaacacttcctggtcaccttcgttcatgcgctg
gagcagcagaaagactttgccgtaagagacaggtgcaatctggcctctctgctcaccatt
gccctccatggtaaactggagtactacaccagcatcatgaaggagttgctagtggatctg
atcgacgcttcagcctccaaaaaccccaaactgatgctccggcggaccgagtccgtggtg
gagaagatgctcaccaactggatgtccatctgcatgtacagctaccttaaggagacggtc
ggagagccgttcttcctgctgctgtgtgccatcaagcagcagatcaacaagggctcgatc
gacgccatcacggggaaggcacgctacacactcaacgaggagtggctcctgcgagaaaac
atcgaagccaaaccacagaacatcaacgtctccttccagggcttcggtatggactcagtg
atcgtgcgtgtgatgaacacggacaccatcggtcaactgaaggagaagatactagaggcc
ttttacaagaacctgcccttctcacagtggcctcgagaagaggatgttgatctggagtgg
ttcccagtgggccgcagcagcagaatcctgcaggatctggatgactcgtctgtcatggag
gacggcaggaaaaaactcaacaccgtcttccactatcagatcccagatggagcgtcactg
gccatgagcatgaaggacaagagagagaacacactgggccgagtgaaagatctggacaca
gacaagtatgttcatctggtgctgccacacgacgagctgacagagagcaggaagtcccac
agacacagtcacaggaagaaggtgttacctgagatctacctgacacgactgctctccact
aagggaaccctgcagaagttcctggacgatctgtttcaagccatcctcagcattcctcca
gagaaaccaccgctagctgtcaaatacttctttgactttctagaagaacaggcggacaag
cgtggcataaccgaccccgacacgttacacatctggaagaccaacagtttgcctctgcgc
ttctgggtcaacatcctgaagaaccctcagtttgtgtttgatatcgataagacggatcac
atggacgcgtgtctgtctgtcatcgcacaggcttttattgacgcctgctctctctctgac
ctgcagctgggcaaagattctcccaccaataaactgctgtatgccaaagagatcccggag
tataagaagcgagtgcagtgttactaccagcagattcaggagatggcggcgctgagcgag
caggaaatgaatgctcacctggccgaggagtcccggagatacaggaatgagttcaacact
aacctggccgtgatggaagtctacaagtatgccaagagatatcgcaatcaggtggtgagc
gcgctggactccagcccgacggctcgacgcactcagctgcagcagaagttcgagcaggtc
attgcgctggtggaagacaacatctatgagtgctgcagtgaggcctga
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