Carassius gibelio (silver crucian carp): 127963374
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Entry
127963374 CDS
T08819
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127963374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127963374
03036 Chromosome and associated proteins [BR:
cgib03036
]
127963374
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
127963374
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
127963374
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127963374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
SET
zf-C2H2_4
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
127963374
NCBI-ProteinID:
XP_052419230
LinkDB
All DBs
Position
B8:1016949..1034647
Genome browser
AA seq
549 aa
AA seq
DB search
MKVHHHHHHHHPSSVLLLQSDMLKPGEPSGSAFLKVDPTYIQHWQQLFPQNSALKAASLP
PPVPQRPSLISSSSSSSSASPAGHIALLGHPLSSDTAGGSSQAKELCLSSNFKNDKGSRL
KLSSEELDYYLYGQQRMEIIPINNHNGELNNRCDMCADNRNGECPMHGPLHSLRRLVGTS
SSSVTAAPPDVPDWLRDLPREVCLCTSTVPGLGYGICASQRIPQGTWIGPFQGVPLPLDK
VQSGSVRNTRHLWEIYDQEGTLQHFLDGNEPSKSSWMRYIRCARHCGEQNMMVVQYRSCI
FYRACADIPRGTELLVWYNDSYTSFFGIPLQCVAQDENLNVPSSVMEAMSRQDSLQPFSK
SPKPSSSSLLPRSMVFPQTPCSRSFSLLDKSHVESSLSQMSGKNQRVLASPTSTSQLSSD
FSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSD
RPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPIS
ESSESIEVD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccaccaccatcaccatcatcatcatccatcatctgtgctgctgttacagtcg
gacatgctgaagccgggcgagccgagcgggtctgctttcctcaaagtggacccgacctac
atccagcactggcagcagctcttcccgcagaacagcgcgctgaaagccgcttctcttccg
cctccggtgccgcagagacccagcctgatctcctccagctcctccagctccagcgcgtct
cccgcgggtcacatcgcgctgctcggacacccgctgagctccgacaccgccgggggatcg
tctcaagccaaagaactttgtttgtcgtccaactttaagaatgataaaggctcgcgactg
aagctgagctccgaggagctggactattatctgtacggacagcagcggatggagatcatc
ccgatcaacaaccacaacggagagctcaacaaccgctgtgacatgtgtgcggacaaccgt
aacggagagtgccccatgcacggacccctgcactcgctgcggaggctggtggggaccagc
agctcctcggtgaccgctgctcctccagacgtcccggactggctcagggatcttcctcgt
gaggtgtgtctgtgcaccagcaccgtcccgggtctgggatacggcatctgtgcgtcccag
cgtatcccacagggcacctggatcgggcccttccagggcgtcccgctgccgctggacaag
gtgcagtcgggatccgtgcgaaacacaagacacttatgggagatttatgatcaggaggga
accttacagcactttcttgacgggaacgagcccagtaaatcgagctggatgaggtacatc
cgctgcgccagacactgtggagagcagaacatgatggtggtgcagtacaggtcgtgtatc
ttctaccgagcgtgtgcagatatccctcgaggaacagagctgctggtgtggtacaacgac
agctacacgtctttcttcgggatcccgctgcagtgcgtcgcacaagacgaaaacttgaac
gtgccgtcttctgtcatggaggcaatgtctcgtcaggactcgctccagcccttcagtaag
agtcccaaaccctcgtcttcctcgctgctgccgcgctccatggtcttccctcagacgccc
tgctctcggagcttctctctgctggacaagagtcacgtggagtccagcctgagccagatg
agcgggaagaaccagcgcgtgctggccagccccacgtccaccagccagctgagctccgac
ttcagcgactggcatctgtggaagtgtggccagtgcttcaagaccttcacgcagaggatc
ctgctgcagatgcacgtgtgcacgcagaaccccgacaggccgtatcagtgcggtcactgc
tcgcagtcgttctcgcagccgtccgagctccgcaatcacgtggtcacacactccagtgac
cggcccttcaagtgcggctactgcggccgagccttcgccggagccaccacgctcaacaac
cacatccgcacacacaccggggagaagcctttcaagtgtgagcggtgcgagcgcagcttc
acgcaggccactcagctcagcagacaccagcggatgcccaacgagtgcaaacccatcagc
gagagcagcgaatcaatcgaggtggattaa
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