Carassius gibelio (silver crucian carp): 127966213
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Entry
127966213 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127966213
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127966213
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127966213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
wHTH_TTC3
TTC3_DZIP3_dom
TTC3_9th
TPR_2
zf-RING_2
TPR_1
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
TPR_11
TPR_16
TPR_17
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
PHD_2
zf-RING_11
CARD_2
zf_RING_Vps8_fungal
PAM2
PHD
Motif
Other DBs
NCBI-GeneID:
127966213
NCBI-ProteinID:
XP_052423008
LinkDB
All DBs
Position
B10:complement(23981140..24002240)
Genome browser
AA seq
1736 aa
AA seq
DB search
MSDSDDSDLEERADVVLHRTKIIYQSQFPYIHMDPPDVIYERWSRIKPEVKKHVGHLMHV
SVFWWHILLRQQDNHPTTFWAVEMGFLDSNVSNDLSLKRLEKIEILESILDAMERGLSHS
DTETKARAVVSLSRLFSADEDCLPEAIGWLRDSGAPDIGKKLLDLGSVEIRYRTLCFVFS
EYSRYLQVISCSKKKAIEELKSEPDSWTLLKSEDMKNKGNEQFQKKKYDLALKWYTKAIK
YHPCNHILYGNRALCFIRSEKYLKALGDGKRAIILQPDWAKGHYRFCDALFYLGEHQRAL
RANRVALDACGADPEGHRDLQQQHERFLTELQESTAEIKNKRTEPKKTPSKSRSHSDSSG
LHQKPSHQSEATSQSSVQERAESGSWKHQDEAAGNSGARVFTEGRADRVKDIKSEMSPRK
NKRSSSAVPEKPAVRSKHPPVPDAPSPPAEDESSAGRRKRFCAAVQEAHTALSDQRCRNA
QQSFSVALRILESSGTSELGLTELDKSVLMYGYAVALLEIGQPEELAEAQRLFTKLESSE
RKFQSLVHYGMGRVYLKENRFPKALECFTNAQLMIQRHITPGKLTWPTTKTTVEETQPAC
LQEHLKNLIEVCRFPPKADAVCRYQHCLSHTVEIYFSDPDFKGFIQLICCQSCRVQFHMS
CWKKLKTLSFSDKSDKDFLKDLCFTPDCGGQVCHIVIYCSTGLIKCEFKTSIPKIKPVGR
LRIKQQCTSIKKLRSKNEGKLRRKQHQLATHSTRQERKSVTAADDPKDPTAERETPTDCI
YMDRVLHQIHDNRGLFKEESVNISCILDHLRPWLDLFESKGHESVLNSRREPGALWELVD
LLLESRNRVWARVFIQTLSLTLHIKPRLQLWAQQLDNAGLKAAQSFISRHSSLLEEMDLK
PLLSFTPLQETLIQTFGSVPQLFERDGLTVMEYLRQAPAKDMRLFIWTLESNRERYHSCS
FILDQYFEDDAVCLVIKKTDDDEHMSSVFKSKNRHRKKKQKELKSVFVLSGMRGGHSRDE
EDEEEELFSEEDSLMFLNSMDPFSVPEHLRGQLEEFEEQYSGSSHRSHYQRILDNNPDPT
KESLYDYFAQILEEHGPLCASDPLMMGELENFPPEAQQKISNAGGLECFLLESLRFVLME
ELIGLMKHAVSLTDPAPSHLNPSAEEFWPLTDSLSFTASHLSLPDDDQQKSVSSDVFLLL
PDPYALDCPVSDLQEHTPASEQTRDKHTAVCVRDLAEHTDVSINTEPYVCFERNSGDMLQ
TEKQRLQLLKEIHQMKEDHEAVQQRRAQEISALQEETQNITLSMQIASTELSMFQQKLEE
VVRRDQQEKKENQETLKTLKMEIRDLADLHESHSRDISVKQKEYEAELERFLDESNQCAS
ERLSLEEEIKRFRDACVKAQRRSLMAQLCVLQSRRERALRRLRMSVSEGKMVIKHLTEAS
LSFPSGALSVIDHWRKHVCDAEEQIHRTQMEFEAQMDQVKSGTRLCSLPDVCVPSVPTAP
ALPAMLPPPVPQPSQFHGPYVSLPPGRTATPTGSSTPTDRLPEEPVTRRPPAPPPLTVYD
RILERLHMMFPHYSRPVLNKFIQEVRVSSGGALNTLTYDDVINRVAQLILDHQENTREQV
NLTAGDAPGHMTAPSDAAVRATGSLTHAWKNMSEKHHNRALALNMEDPCIICHEDMSPEE
VCVLACRHSFHRECIKSWLKEQSTCPTCREHALLPEDFPLLPGRQRRSHTPAAAFN
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcggacgactctgatctggaggagcgagcagacgtggtgcttcacagaacc
aagatcatctatcagagccagttcccgtacatccacatggatccgcccgacgtcatctac
gagcgctggagcaggatcaagcccgaggtgaagaagcacgtgggtcatctgatgcatgtg
tctgtgttctggtggcacatcctcctgagacagcaggacaatcaccccaccaccttctgg
gccgtggagatgggcttcctggactccaatgtgtcaaatgatctgagtctgaagaggctt
gagaagattgagattctggaaagcattctggatgccatggagagaggcctgtctcactcg
gacacggagacgaaagcccgagccgtggtgtccctgagcagactgttctctgcggacgag
gactgtttgcctgaagccatcggttggctgcgggactctggagctccagacatcggtaag
aagctgctggatctgggatcggtggagatccgctaccggacgctctgcttcgtcttcagc
gagtattcacgttatcttcaggtgatttcctgcagtaagaagaaagccatcgaggagctg
aaatcagagccggactcttggactttattgaaaagcgaagatatgaagaacaaaggaaat
gagcaatttcagaagaagaaatatgatctggcgttaaagtggtacaccaaagccattaaa
taccacccctgcaaccacatcctgtacgggaacagagcgctctgcttcattcgctcggag
aaatacctgaaagcacttggagacggaaagagagccattatattacagccagactgggcc
aagggtcactaccgcttctgtgatgctctgttctatctgggggagcatcagagagctctg
agggccaaccgtgtggctctggacgcctgcggcgcggaccccgagggacaccgagacctg
cagcagcagcacgagcgcttcctgacggagctgcaggagagcacagcagagatcaagaac
aagagaactgaacccaagaaaactccttctaaaagcagatcacacagtgattcctcaggt
cttcatcagaaacccagtcatcagtctgaagcgacgtctcagtcttcagtccaggagaga
gcggagtctggaagctggaagcaccaggatgaagctgcaggtaattcaggagctcgagtg
ttcactgaaggacgagctgaccgagtcaaagacataaagagtgaaatgagtccacggaag
aataagagatcctcatctgctgtcccagagaaaccagcggtccggagcaagcaccccccg
gtcccagacgctccgagccctccagcggaggacgagagctcggcggggaggaggaagcgc
ttctgtgctgctgtccaggaggctcacacggctctgagtgaccagcgctgcaggaacgct
cagcagtccttctccgtggcgctccggatcctggagtccagcgggacctcggagctgggc
ttgacagagctggataaatctgtgctgatgtatggatatgcagtggccctgctggagatc
ggacagcctgaggaactggctgaagctcagcggttgttcaccaaattagagtcgtcagag
aggaagtttcagtcgctggtgcattatgggatgggcagagtttacctgaaggagaacaga
tttcctaaagctctggagtgcttcactaacgcacagctgatgatccagagacacatcaca
cctggaaagctcacctggccgaccaccaaaactacagtagaggaaacacagccggcctgt
ctgcaggaacatctgaagaacttgatagaggtgtgtaggtttcctcctaaagcagacgcg
gtctgccggtatcagcactgcctctctcacacggtggagatctacttcagcgatccagac
tttaagggcttcatccagctgatctgctgtcagagctgcagagtccagtttcatatgagc
tgctggaagaagctcaaaacactttcattctctgataagagtgacaaggattttctaaaa
gatttgtgttttacgccagactgtggaggtcaggtctgtcacattgtaatatattgctcg
acggggctgataaagtgtgagtttaaaacatctattcctaaaatcaaacctgttggacga
ttgagaatcaagcagcaatgtacaagtattaagaagttgaggtctaaaaatgaaggaaag
cttcggcggaaacagcatcagttggcgacacattctacccgtcaagagagaaagagcgta
acggctgcagacgaccctaaagaccccacggcagagagagagacacccacagactgtatt
tatatggaccgtgttttacatcaaattcatgataacagaggactatttaaagaagagtcg
gtgaatatttcttgtattttggatcatctgcggccgtggctggatttatttgagagtaaa
ggacatgagagtgtgttaaacagccgtagagagcctggagctctgtgggagctggtggat
cttctgctggagtccagaaaccgtgtctgggctcgagtctttatccaaacgctcagcttg
acgcttcatatcaaacccagactgcagctgtgggctcagcagctggataacgctggtctg
aaagctgcgcagtcgttcatcagtcgtcacagctctcttctggaggagatggacctgaag
cctcttctcagcttcacaccgctgcaggagacgctcatccagacgttcggcagcgttcca
cagttattcgagcgtgatggtttaactgtaatggagtatttaagacaggctccggctaaa
gacatgcgtctgtttatttggactctagagtcgaatcgagagcgctatcactcctgttct
ttcattcttgatcaatattttgaagacgatgctgtttgtttagtcattaaaaagacggat
gatgatgagcacatgagctcagtatttaagagtaaaaacaggcatcgtaagaagaagcag
aaagagttgaagtctgtgtttgtgctgtctgggatgagaggtggacattccagggatgag
gaggatgaggaagaggagctcttctctgaggaagactctctgatgttcctgaatagcatg
gatccgttcagcgttcccgaacacctgcgaggacagctggaggagtttgaggagcagtat
tcgggatcatcacaccggagccattaccagaggatcctggacaataaccctgaccccact
aaagagagtttatacgattattttgctcagatcctggaggagcacggtcctctgtgtgcg
tctgacccgctgatgatgggcgagctggagaactttcctccggaggcgcagcagaagatc
tccaacgctggaggactcgagtgcttcctgctggagtctctgcgcttcgtcctgatggag
gagctgatcgggctgatgaagcacgccgtgtctctgacagaccccgctccgtcacacctc
aacccctcggctgaagagttctggcccctcacagactccctcagcttcactgcgtctcac
ctcagcctccccgatgatgatcagcagaagtctgtgtcctcggatgtgttcctgctcctc
cccgacccgtacgccctcgactgtcccgtctcagatctgcaggaacacacaccggcgtct
gagcagacacgagacaaacacacggctgtgtgtgtgcgggatctggccgagcatacagac
gtctccattaacaccgagccatacgtgtgcttcgagaggaacagcggcgacatgctccag
acggagaagcagaggctgcagctgttgaaggagatccatcagatgaaggaggatcatgaa
gccgtgcagcagaggagagcccaggagatctcagcgcttcaggaggaaacacagaacatc
actctgagcatgcagatcgccagcaccgagctcagcatgttccagcagaaactagaggag
gtggtgaggagagaccagcaggagaagaaggagaaccaggagacgctcaagacactgaag
atggagatcagagacctggcagatttacacgagagtcacagcagggacatcagtgtgaag
cagaaagagtacgaggcagagctggagcgcttcctggatgagagtaatcagtgtgcgtct
gagcgtctgagtctggaggaggagatcaagcgcttcagagacgcgtgtgtgaaggcccag
aggagatctctgatggctcagctgtgtgtcctgcagagcagacgtgagcgagcgctgagg
cggctccggatgagcgtctctgaagggaagatggtgatcaaacacctgacggaggcctcg
ctcagtttcccctccggagcgctgtcagtcatagaccactggaggaaacacgtgtgtgac
gctgaagaacagatccacagaacacagatggagttcgaggctcagatggatcaggtgaag
agcggcaccagactgtgttctctgcctgacgtctgtgttcccagcgtccccacggccccc
gctctaccggccatgcttcctcctccggttcctcagccgtctcagttccacgggccgtat
gtgtcacttcctcccggccgcacagccacgcccacaggaagcagcacaccgacagacaga
cttcctgaagaacctgtgacccgccggcccccagcgccgccccccctcacggtgtacgac
cggatcctggagagactccacatgatgttccctcactacagcaggccggtgctgaataag
ttcatccaggaggtgcgtgtgtccagtggaggcgctctcaacacactgacctatgatgat
gtcatcaaccgagtggcccagctcatcctggaccatcaggagaacacgcgtgagcaggtg
aacctcacggctggagacgccccgggtcacatgaccgctccgtctgatgctgctgtcaga
gccaccgggtcactcacacacgcctggaagaacatgtccgagaaacatcacaacagagcg
ctggcgctgaacatggaggatccctgcatcatctgtcacgaggacatgagtccagaggaa
gtgtgtgtgctggcgtgccgtcacagcttccacagagagtgtataaagtcgtggctgaag
gagcagagcacgtgtcccacctgtcgagaacacgctctgttaccggaggacttccccctg
ctgcccgggagacagcgcaggagccacacgcccgccgccgccttcaactga
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integrated database retrieval system
