Carassius gibelio (silver crucian carp): 127969177
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Entry
127969177 CDS
T08819
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127969177
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127969177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127969177
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127969177
Membrane trafficking [BR:
cgib04131
]
SNARE
SNARE associated proteins
Others
127969177
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
127969177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
127969177
NCBI-ProteinID:
XP_052426913
LinkDB
All DBs
Position
B12:complement(18810486..18828736)
Genome browser
AA seq
1048 aa
AA seq
DB search
MLATQTTESGPETRDVKQWIKDKIARTLKVLQKRYITTDTAVTSEDLEANLLCCALEAVF
IHGIKSKFIRFDGSQVRKGGSRGALPQPVFWSLLKTVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLTSLLREGSNLGSYYQPGALLLDPEDREVLLTLLQGLSSMIFQLS
YKSAVLNEWTNTPLVLAGLCPPTPADEHLVGPKRKESWDTVSQSSAGSGGSDWAQEVLQR
EPRREQLNTPLTTSNQSLDTSGSSQLSSSLSSDSLLQGHELRSPEKEPWSCDTEISQHTQ
QKISAADDSSSSNQDLKEDFDVFIPASDSATQAVNDNTHKPDASLTAAQDTHQSEAHISE
QSKACSENISAETLPETQESKTLVKTATVTETPEGGQKNSPVDSPSVSALTEMVEKTSDL
KDPDALPSETSIASSSVEQSQHAAYRRSASTVSRKTSSDSLYSSCKSTSWISEDDFYKPE
KMDSPEAYAVIDISQMNGPETPTSEPTSIQSTPSVVHRRQNGLRNPFRGLLKLGQLERRS
AVGMWWDYSCELSPFELRLYIDAEERICYENLSLLRCEDVHLSSSTEGRFRLSFPGKRIY
LRAPSRGEAEDWVDRIVEAISKLRPMIKEEQWEVLHSSSDQDVPSPTPSSPEHTNSELPD
TPQLDWTRYKDPEPDAIKEAVVYQNLEEKGWRCVLLSLSLETLRGYQVQGDSKTPLFSYP
IGSIRDVVPDVSLGSPAFFKVLTVRDTLTLRAESGEEARGWRSLIRGALDSYLETEDDGA
GQGVSAVGSVHKLVQHRLKGDGVLLSHLSTVPNERGLDAQNYKCAGCPRQIGMSLGRARL
CEFSGQYYCESCHQGDTTIIPSRMLHNWDLTARQVSKQAFKLLTQIEHEPLLHLEVLNPD
LFDHTDIMEKVQSLRLRLRFLGDYILICRSGISKQIQPRLQQRTYLLDNSDLYSVLDLQQ
IADEHYESYLQSLIQFGSKHVLSCDLCTQRGFICQICNSDNIIFPFQFDSTIRCDICKTV
FHSSCKAKCPVCPRCVRIQKYMERDLED
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccaaacaactgagagcggcccagaaaccagagatgttaaacagtggatt
aaggacaagatcgcacggacactgaaagtcctgcagaagcggtacatcaccacagacacg
gcggtcaccagcgaggacctggaggcgaacctgctgtgttgtgctttggaggccgtcttc
atccatggaatcaagagcaagttcatccggtttgatggaagtcaggtacgcaaaggaggg
tcacggggagcacttcctcagcccgtcttctggagcctgttgaagaccgtcacccacagg
gatgtagttcaagagctggagcgtctaagcttcataaactcagacatcggccgctgcaga
gcatgggttcgcctggcgctaaatgacgggcttctggagtgttacctgacctcgctgctt
cgtgaaggctccaacctgggctcctactaccagcccggggctcttttgctggacccggag
gaccgtgaggttctcctcaccctcctgcagggtttgtcctccatgatcttccagctctcc
tataaatcagctgtgctgaatgagtggaccaacacacccctggtcctcgcgggtctgtgt
cccccaacgcctgccgacgagcatcttgtaggccccaagcgcaaggagtcttgggatacg
gtctcccagtcatccgcagggtctggaggctcagactgggctcaggaggtgctccagagg
gagcccaggagagagcagctgaacacacctctgaccacatcaaaccagagtctggacacg
tccggatcatcacagctgtcctccagcctgagctctgatagtctgctgcagggtcacgag
ctcaggagtccagagaaggagccctggagctgtgacacggagatcagccaacacacacaa
cagaagatcagcgctgcagatgacagcagttcctctaatcaggacttgaaggaagacttt
gatgtgttcataccagcttcagattctgcaacacaagctgtcaatgacaacacgcacaag
cctgacgcgtctctcacagctgcacaggacacacatcagtcagaggcacacatctccgag
caatctaaagcatgctcagaaaacatttcagctgagacgttaccggagacgcaagaatcc
aagactctagttaaaaccgccacagtcaccgagactccagaaggtggccagaagaactca
cctgttgattccccttcagtttctgctttgactgagatggttgagaagacctccgacctt
aaagaccccgacgctcttccttcagagacctccatcgcctctagttcagtggagcaatcc
caacatgctgcatatagacgctccgcaagcaccgtcagcaggaaaacctcctcagactct
ctgtattcctcctgcaaatccacatcttggatatcagaggatgatttctacaaaccagaa
aaaatggacagtcctgaagcgtatgccgtcattgacatctcgcagatgaacgggccagag
acgcctacctctgaaccgaccagcatccagtcaacaccgagtgtagtgcaccggagacag
aacggtcttcgtaacccgttcaggggtctgctgaagctgggtcagctggagcgccgcagt
gcggtgggcatgtggtgggattattcctgcgagctctctccgtttgagctgcggctttac
atcgacgcagaggagcgcatctgctacgaaaacctgtccctgttgcgctgcgaagacgtt
cacctgtcctccagtaccgagggccgattccggctctccttccccggcaaaagaatctac
ctgcgtgcaccgtctcgaggagaggcggaggactgggtggatcgcatcgtggaggccatc
agcaaactacggcccatgataaaagaagaacagtgggaggtgctccactcgtccagtgac
caggacgtcccctcaccgacaccatcaagccccgagcacaccaactctgagcttccagat
accccacagttagattggactcgttataaagacccagaaccagacgccataaaggaagcg
gtggtctatcagaacttggaggagaagggttggcggtgtgttttactttccctctccctg
gagaccctcagaggttaccaggtccaaggggactcgaagacgcctctgttctcatacccc
attgggagcatcagggatgtggttccggatgtctctttaggaagcccagccttttttaaa
gttctgactgtgcgggacactctgacgctgcgggcggagagcggtgaggaagcacgagga
tggaggagtctgatcagaggagcgctcgactcgtatctggagacggaggatgacggagcg
ggtcagggcgtctcagcagtgggcagtgtccacaaactggtccaacacagactgaaggga
gatggggtgctgctctctcacctgtctactgtcccgaatgagagaggactagatgcacaa
aactacaaatgtgcaggttgccctcgtcagatcgggatgtctctggggagagccagactc
tgtgagttctcgggtcagtattactgtgagagctgccatcagggagacaccaccatcatc
ccctcacgcatgctgcacaactgggacctgaccgcacgccaggtttcaaagcaagccttt
aagttgctgactcagattgagcacgagccgctcctgcaccttgaggttttgaaccctgac
ctgtttgatcacactgacatcatggagaaagtgcagagcctgagactaaggcttcgtttt
ctcggagactacatcctcatctgccgcagcggcatcagcaaacagatccaacccagactt
cagcagcggacatacttactggacaacagtgatctatacagtgtactggacttgcagcag
atagcagacgagcactatgaatcttacctgcagtctctgattcagtttgggtccaagcac
gtgctcagctgtgacctttgcacccaaaggggctttatatgtcagatctgcaatagtgac
aacatcatcttccctttccagtttgacagcaccattaggtgtgacatctgcaaaacggtg
tttcattcctcctgcaaggccaagtgtccggtctgtccacgctgcgttcgcatacagaag
tatatggagagggatttggaggactga
DBGET
integrated database retrieval system
