Carassius gibelio (silver crucian carp): 127970582
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Entry
127970582 CDS
T08819
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127970582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127970582
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127970582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
127970582
NCBI-ProteinID:
XP_052429177
LinkDB
All DBs
Position
B13:complement(16426898..16433704)
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AA seq
472 aa
AA seq
DB search
MSAAGPPQSPGVAKTEVLVEDWCPVLAATFAYWDNILGPRVQHIWAPKGQRLPLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIIFVLSSEIVPIMELLTSMKKHSVPEEV
DHTKKYFSSLQLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVL
TLCLFLTPAERKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHID
VDINTVKQMPPCHEHTYHQRRYMRAELSALWKAASEDDISSDNLINAQDSYTPDLNIFQD
VMHKDTLVKSFIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRS
LRNLKTDLDLTVEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagccggtcccccgcagtctcctggtgtggctaagactgaagtgctggtcgag
gactggtgtcccgtgctggctgcaaccttcgcttactgggacaacatcctgggaccacgt
gtacagcacatctgggcccccaaaggtcagaggttgccgctgctcagtgatggagaggtc
acgtttctggccaatcacacgctgaacggcgagattttgcgaagtgcggagagtggagca
gtggatgtgaagttcttcgtcttggcagaaaagggagttatcatagtctcgctgattttt
gacggagaactcaagggggataagaacacttgcgcgctgtcaatcatcctgccgcagtca
gagctaagcttttacctgccactgcacagtgtgtgtgtggagagactcaagcacatcatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctttgtgttgtcatctgag
attgttcccataatggagctgctaacctccatgaagaaacacagtgtaccagaggaagtg
gatcacacaaagaaatacttttcctcgttacagctaaaggacacggtgctcaatgatgat
gatattggagacagctgtcacgaagactttttacacaaggctatcagctctcatcttcag
acttgtggctgttccatggtggtcggcagcaatcctgagaaagtcaataagatcgtgctc
acgctgtgcctcttcctcactcctgcggagagaaagtgctctcggctgtgtcaccccgac
ggctcatttaaatatgacaccggcctctttgttcaaggcctccttaaggactccacaggc
agctttgtgttgccctacaggcaggtgctctactccccgtaccccaccacccacatcgac
gtggacattaacacggtcaagcagatgcccccctgccacgagcacacgtatcatcagcgg
cgctacatgcgtgctgagctcagcgccctctggaaggccgccagcgaggatgacatcagt
tctgacaacctcatcaatgcccaggactcctacactccagacttgaatatatttcaagac
gtgatgcacaaagacacacttgtgaagtctttcatagatgaggtgtttctgttgaaacca
ggactgtctctgcggagtgtgtatttgtcccacttccttctcctgctgcacagaaaggcc
ctgacactgctcagatatattgaggatgagacgcagaagggcaaaaaacctttcagatct
ctacgcaacttgaaaactgatttggacttaacagtggagggtgacttgaatatcatcatg
gcgatggcagagaaactgcgggcaggtcttcactccttcgtttttgggaagtctttcctt
accagtgtgcaggagcgtgacctcctcattaacttctga
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