Carassius gibelio (silver crucian carp): 127970765
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Entry
127970765 CDS
T08819
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127970765
04020 Calcium signaling pathway
127970765
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
127970765
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127970765
Protein kinases [BR:
cgib01001
]
Receptor tyrosine kinases (RTK)
RET family
127970765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
127970765
NCBI-ProteinID:
XP_052429437
LinkDB
All DBs
Position
B13:14193799..14219052
Genome browser
AA seq
1107 aa
AA seq
DB search
MGTTRGIVWGDIAVLLLLLSEGSLGLYFPQRLYTESIYVGQPQGSPVLQVHSMRESTTER
PYFTLCSHRDTYASWFHMDVTTGVLSMNKTLEWSDFSSIRSSSVRSVKDLNLKVGVAPVQ
KQFCHFLPTVEVKLVFINDTAPSCGQVELKTLCFPDKVSKPHITENRMPGALRQLRRFTR
MNICPNYTITYGVESVSPAPFAVDDSTSELVVTAAVDREEMESYHLDLVCIIQTEEKLEK
FFSSLHVDIYDEDDNPPYMNGTDTEDIKIEFNRSEGTVYGTLFVYDRDTTPVYPTNQIEN
KLVGTLMTNDIWIKNTFTIEHKFREERAIFGNVRGTVHEYKLKLSQNLSVTEQRSFQLDY
LLNDTTFPGPEGTVLLHFNVTILPVSIHFANVTYFFTVSPKATTYSQIGSVCVDNCLKFK
GIDVTYQLEIEDKNISADAQSCYRAVGLAQNPNEKTGLLYVNDTEVLRRPQCQDLQYVVI
AEEQKNKFQAKTQLVIIFEGKADPMRLDEQRVLACAEKRQRGECEASRGLAAPTGRCQWR
QSRDTGISPNYSTCSPDLRTCPDGYCDAIESKNISICPQDCSSQPVIGGYERELYGIRAG
HGTCYCFPERCFCEKDELEEFFCNDMCKTIIATGILLSFIISIILSSYFFHRYHKSTPKP
PIASAEMTFRRPAQSYPLSYSANNVRRASLDSMENQVAIETFKIPEDPKWEFPRKNLVLG
KTLGEGEFGKVVKATALRLKGKAGYTTVAVKMLKDNASHSELRDLLSEFTLLKQVNHPHV
IKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENPDERALT
MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVK
RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG
YRMEKPENCTDEMYNLMLRCWKQESDKRPTFSDISKELEKMMVKSRDYLDLAASTPADAL
LYDDSLSEEDTPLVDCSNAPLPRSLPSTWIENKLYGMSYPNWPEKSPVPLNRLDATNPVF
TRYANDSVYANWMALQSPAKIVDTLDS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgggaactacgcgtggaatcgtttggggagacatcgcggtgctcctgcttctcctgtct
gaaggttcacttggactatattttcctcaaaggctgtacacagaaagcatctacgtgggt
cagccacagggatcaccagtccttcaggtccattcaatgcgggaaagcactacagagagg
ccctatttcaccctgtgctcccatagagacacttatgcatcatggtttcacatggatgtg
acaactggggtcctttcaatgaacaaaaccctggagtggagcgatttcagtagtatacgc
agcagctcggtcaggtctgtgaaggatctcaacctgaaggtcggagtcgctccagtgcag
aaacagttttgccacttccttcccacagtggaggtcaaactggtgttcattaatgacaca
gcgccctcctgtggtcaggtcgagctgaaaacattgtgtttccctgacaaggtttcaaaa
ccccacatcacagagaaccgtatgcccggggccctgcggcagctccggcgcttcacacgc
atgaacatttgccccaactacaccatcacttatggagtggaatcagtctctccagctcca
tttgctgtcgacgactccacttcagaactggtggtcacggcggccgtggaccgtgaggag
atggaatcgtaccatctggatctagtgtgtataatacagacagaagaaaagctggagaag
ttcttcagttctctgcacgtggacatctatgatgaggacgataatcctccttacatgaat
gggactgatactgaggacatcaaaatagagtttaaccgcagtgagggtactgtctatgga
actctgtttgtatacgacagggacacaacgcccgtttatcccacaaaccaaattgaaaat
aaattagttggcactttaatgacaaatgacatctggatcaaaaacacttttactatcgaa
cacaaatttagggaagaaagagccatctttggaaatgtccgagggacagtccatgaatac
aaactgaaacttagtcagaatctgtctgtgacagagcaacgctcatttcagttggactac
ctgctcaatgacaccactttcccaggcccagagggaacagtgctgttacatttcaatgtg
actatcctgccggtttctattcacttcgccaatgtcacctacttcttcactgtgtcaccg
aaagcaacaacatactcccagatcggaagtgtctgtgtggacaactgtctgaagtttaag
ggcatcgatgtcacgtatcaattagagatcgaagacaagaacatctctgctgatgctcag
tcatgttacagggctgttggccttgcacagaacccgaatgagaagacaggtttgctctat
gtgaacgacacagaggtgctacgcagaccgcagtgccaagatctgcaatatgtagttatt
gcagaggagcagaagaacaagtttcaggccaagacgcagctcgtcattatttttgagggt
aaagcagatcccatgaggctggatgagcagcgggttctggcttgtgcagaaaagagacag
cgaggggagtgtgaggcgtctcgaggcctggcagccccgacaggcagatgccagtggaga
caaagcagagatacaggaatatctccaaattactccacctgttcccctgacctccgcacg
tgtccagatggttactgtgatgccattgagagcaaaaacatatccatatgtcctcaggat
tgctccagtcagcctgtaatcgggggttacgagagggaactgtatggaatcagagctgga
catgggacctgctactgttttccagaaaggtgcttctgtgaaaaggatgaattagaagag
ttcttttgtaatgacatgtgcaagaccatcattgcaactggtatcctcctctccttcatt
atctccatcatcctgtcctcgtactttttccaccgttatcacaagagcacacctaagcct
cccatcgcctcagctgaaatgactttccgccgaccagcccaatcctacccactcagttac
tcagcgaataatgttcgacgagcttctctagactccatggagaatcaggtggccattgaa
accttcaaaatacctgaagatccaaagtgggagttcccacgaaagaacctagtgctgggt
aagactcttggagagggagagtttggaaaggttgtgaaggccacggctttgcgcctcaaa
ggaaaagctggatacactacagttgctgtgaagatgttgaaagataacgcatctcacagt
gagcttcgagaccttctgtcagagttcacgttgctcaagcaagttaatcaccctcatgta
ataaaaatgtatggagcctgcagccaagatggtccattatatttaatcgttgaatatgcc
aagtatggctcactgcgaaactttttgagggagagccggaaagttggaccaagttacatg
ggcaatgatgccaaccgcaactccagctacttggaaaacccagatgagagagctctgacc
atgggcgacctcatctcttttgcctggcagatctccagaggaatgcagtacctggctgaa
atgaagcttgttcacagagacctggctgccaggaatgtgctggtggcagagggaaggaag
atgaaaatatctgactttggtttatctcgagatgtttatgaggaagattcatatgtgaag
aggagcaagggtcgtattcctgttaaatggatggctatagaatctttgttcgatcacatc
tacaccacacaaagtgatgtctggtcttttggtgtcctcttatgggagattgtaactctg
ggtggaaacccctacccaggcattgctccagaacggcttttcaaccttctgaagacgggc
tacaggatggagaaaccagagaactgcacggatgaaatgtacaatctgatgcttcgctgt
tggaaacaagagtcagataagcgtcccactttctcagacatcagcaaagaacttgagaag
atgatggtgaaaagtcgagactacctggatctcgcggcctccacaccggcagacgccctg
ctatatgacgactctctctctgaagaggacacacccttagtggactgtagtaacgcccct
ctccctcgatccctcccctccacttggattgaaaacaagctctatggcatgtcatacccg
aactggccagagaagagcccggtaccgctcaacagactcgatgccactaaccctgtcttt
acaagatatgccaatgatagtgtttatgcaaactggatggctttgcagtctcccgcaaaa
attgtggacacgctcgatagctaa
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