KEGG   Carassius gibelio (silver crucian carp): 127971409
Entry
127971409         CDS       T08819                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    127971409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgib03000]
    127971409
   04121 Ubiquitin system [BR:cgib04121]
    127971409
   03036 Chromosome and associated proteins [BR:cgib03036]
    127971409
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     127971409
Transcription factors [BR:cgib03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    127971409
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     127971409
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127971409
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127971409
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8 LRR_6 Rubredoxin
Other DBs
NCBI-GeneID: 127971409
NCBI-ProteinID: XP_052430363
LinkDB
Position
B14:complement(8627447..8640127)
AA seq 1276 aa
MEGESSRYSKRLRTGTRRRYQDDGISDDEIEGKRSFDLEEKLQSDRYNSDLVKIMDGKDF
TLEYIQREGLRDPIIFKKADGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MGQWRRYYETPASEREKLYNVISLEFSHTKLENLVKRPTSVDMIDWVDNMWPRHLKESQR
DSTNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKARMCQRIELKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYFEMCWYVLERYLYCLTNTSHLTPEFQKHSLGIG
LKKEDVIKQAGFNDQGETVVKEEEEEEVVKEEPEEEAASPTRPGVKVHLTPLELEGLWEL
LHKLEDLPAHKKCVPAGIRNAPALLSDIRKLLEEHANDNPKLSYTGKPIVKWPKRPSWYE
PPPPLSLLYRPRAPGSAPVLPPVPRPVKPSSSISALRRRRVRCKRCEACLRTECGDCNYC
RDMRKFGGPGRLKKSCVLRQCLAPALPLTAVCAICKEGYQESIDPESVQTLMECSECAQI
THPECIKVHVPGEGIINKDLPSCWECPKCVQGKKTESSSSSEEETDSSVSNSSRLSGPPA
KRAYREGIGVGGLRIGRRGRPPLSLSSPPLTRSRRQPPPSQRLLLQHQQNRRRAGALELQ
LRKRIKLERNKIIQSTRSSVSLSPKLLRQRSLERGGVVRAGPGRSVSRGRGVSSFRGRGV
RLRGGGRGGGLRERMEMEVERDDSVEEEQEERKENGQYNGKENRPQRRGAKAGEDENGES
HRNGESEGSSEGGEASPSDTSVVLNDDVRGQGSCVTVTLQPSRGRRDPSAIVPKMEANLS
SRSLPQNPKTLLRPPLRNGAPHSDGPRSPADRLHVNKSHALSSSPHTLTRSASKHSHMVR
SLRSNFKDSPHRLTQERVGKKTRSEKAKSSDSCSSSTLRPSAEQNGGNEPGWEREVWVSV
FRYLTRAELCVCMAVCKSWYKWGCDKRLWTRISLSRCRSISPQALTGIIKRQPVTLDLSS
ANISKKQLSWLINRLPGLKDLVLSGCNWASVCALSSPSCPLLRSLDLSWADGVKDAQIRE
LLNPPGSDNRSQMKHMQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALNLLS
AVGSSTRNTLTHLNLAGCSRLTDRCLVYLRRLSCLSVLDLRGCKGVSRQACESFISELSV
NALYCLSDDKLIQRIS
NT seq 3831 nt   +upstreamnt  +downstreamnt
atggaaggggagagttcccgttatagcaaacgcctgcggactggcactcggcggcgttac
caagatgatggcatttcagacgatgaaatcgaagggaagagatccttcgaccttgaagag
aaactccaaagtgaccgatacaactcggatctggtcaaaattatggacgggaaagacttc
accttggagtacatccaacgggagggactccgggaccccattatcttcaagaaagcagat
ggtcttggcataaagatgcctgacccagacttcagtgtcagtgatgtgaaattgtttgtg
ggcagtcgtaggatggtggatgtgatggatgtgaccactcaaaaaggcattgagatgtca
atggggcagtggaggagatactatgagaccccggcatcagaacgtgaaaaactctacaat
gtgatcagtctggagttcagtcacacaaaactagaaaatctagtcaagagacctacctcg
gttgatatgattgactgggtggacaacatgtggccgcggcatcttaaagagagtcagaga
gactccaccaatgccattatagacatgcagtaccctaaagtacagaagtattgtctgatg
agtgtcgagggatgcttcacagatttccacatagactttggcggcacatcagtctggtat
cacatcctcaggggaaggaaggtgttctggctgatcccgcccacacctcagaacctggag
ctctatgagaactgggtgttgtcagggaagcagggtgacatctttctcggcgataaagcc
aggatgtgccaacggattgaactgaagcaaggctacacattcatgatcccctcagggtgg
atccatgcagtttacactccgatggatacgctggtgtttgggggaaactttctgcacagc
tttaacattcccatgcagctcaacatttataacattgaggaccgcacacgggtccctgct
aagttccgctaccctttctactttgagatgtgctggtatgtgttggagcgttacttgtac
tgtctgaccaacacgtctcacctcacacctgagttccagaagcactcactgggcattggg
ctaaagaaggaggatgtgattaaacaagcaggctttaatgatcaaggagaaactgtagtg
aaagaggaggaggaggaggaggtggtgaaagaggagccggaggaagaggcagcatcccct
actcgtccaggggtgaaagttcacctgacacccttagagctggaagggctttgggaacta
ctgcacaagttggaggacttgccagcacacaagaaatgtgttccagcaggcatcagaaac
gcccctgcactactcagtgacatacggaagctgctagaggaacatgccaatgataacccc
aaactgtcttacactggaaaaccaatcgtcaaatggcccaaaaggccctcgtggtatgag
ccgcctccgcctctgtctctgctgtaccgcccgcgtgctcccggttcagcccccgtgctg
ccgccggttcctcgacccgtgaagccgtcttcctccatctctgctctgagacgcagacgc
gttcgctgcaaacgctgcgaggcctgtctgcgcaccgagtgtggcgactgtaactactgt
cgggacatgaggaagtttggagggccgggcagactcaagaagagctgtgttctccgtcag
tgtcttgcaccggcgctacctcttactgcagtgtgtgccatatgtaaggaaggctatcag
gagtctatagaccccgagtccgtccaaacgctcatggagtgctccgaatgcgctcagatc
actcatccagaatgtataaaggtacatgtgcccggtgagggtattattaataaggacctt
cccagttgttgggaatgtccaaaatgtgtccagggcaaaaaaaccgagtcttccagcagt
agtgaggaagagacagacagcagcgtgtccaacagcagtcgcttgtctggtcctccagct
aagcgggcatacagagaggggattggggtggggggtctgcgtataggacgcagaggtcgc
ccgcccctctccctctcctccccgcctctgacccgctccagacgacagccgcccccttcc
cagagactcctgctgcagcaccagcagaacaggaggagagcaggagcgctggagctacag
ctcaggaaaaggataaaattagaacggaacaaaatcatccagtcgacccgttcgtctgtc
tctctttctccaaagctcctgcgtcagcggagtctggagagagggggcgtagtcagagcg
ggacccggacggagcgtttcgcgtggccgaggggtgtcctcctttcgcggaagaggggta
cgactccgaggcggtggccgagggggaggccttagagaaagaatggagatggaggttgaa
agagatgactccgtggaagaagaacaggaggagaggaaagagaacggacagtataatggt
aaagagaaccgtcctcagagacgaggagctaaagctggtgaagacgagaatggagaaagc
catcgaaacggagagagcgaggggagcagtgagggaggagaggcctctccatctgacact
tctgtggtgctaaatgatgatgtcagaggccaggggtcctgcgtcacagtgacgttacag
ccatcgaggggtaggcgcgaccctagcgccattgttcccaaaatggaagccaacttgtct
tctagaagccttccgcaaaaccccaaaaccctgctccgtcccccactgcgaaacggtgcc
cctcactcagacggtcctcgttcgcctgcggacagattgcacgtaaacaaatcacatgct
ctttcatcatcaccgcacactctgaccagaagcgcatccaaacactcacacatggtgcgg
agtctgagatcaaacttcaaagattcccctcaccggctgactcaggagcgagttgggaaa
aagactcgatcggaaaaggcgaagtcctcagactcttgttccagttccaccctgcggccg
tcagcggagcagaacggagggaacgagcccggctgggagagagaggtgtgggtgtccgtg
ttccgctacttgacccgtgcagagctgtgcgtctgcatggctgtttgcaagagttggtac
aaatggggctgtgacaagcgtttatggacgcggatcagtctgagccgctgccgctctata
agtcctcaggccctcacgggcatcatcaaacggcagcctgtcacactggacctctcctcg
gccaacatctccaagaagcagctcagctggctcatcaaccgcctgccaggccttaaagac
ctggtgctatcagggtgtaattgggcatcagtctgcgcactgagctctccaagctgtcct
ttactgcgctctttagacctgagctgggccgatggtgtcaaagatgcacaaatcagggag
ctgctgaacccaccaggcagcgacaaccgttcccagatgaagcacatgcagtgcttgtgg
ctgtgcggtctggaggtgaccgaagccacgctgaggctgatcatcagacacatgcctctg
ctcactcgcctcgagctctcgcactgtcccatcacagacggtgctctcaacctcctcagc
gccgtgggctcctccacacgcaacacactcacacacctcaacttagcaggttgtagccgc
ctgacagaccggtgtcttgtgtacctgcggcgcctgtcttgtctctccgtactggacctg
cgcggctgcaaaggggtctcgcgacaggcgtgcgaaagctttatctccgagctgtctgtc
aatgccctctactgcctatcagatgacaagctcatccagaggatatcgtaa

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