Carassius gibelio (silver crucian carp): 127971868
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Entry
127971868 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04210
Apoptosis
cgib04217
Necroptosis
cgib04510
Focal adhesion
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127971868
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127971868
04217 Necroptosis
127971868
09144 Cellular community - eukaryotes
04510 Focal adhesion
127971868
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127971868
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127971868
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127971868
03029 Mitochondrial biogenesis [BR:
cgib03029
]
127971868
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127971868
Peptidases and inhibitors [BR:
cgib01002
]
Peptidase inhibitors
Family I32: IAP family
127971868
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127971868
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127971868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
zf-C3HC
Motif
Other DBs
NCBI-GeneID:
127971868
NCBI-ProteinID:
XP_052431094
LinkDB
All DBs
Position
B14:20285837..20291113
Genome browser
AA seq
400 aa
AA seq
DB search
MFFHHRATMACSSQDGEIEADNAWSSMPNRVSSFQCFPRSEEFSAKRLARAGFYFTGQAD
RVCCFSCHASVEDWNKGDAPLKRHQQASPNCRFLSCAHGLRASDCTQSPVYDEEAEAMEF
QLRTGAVVDQTIYPAVAHMKSEEARLNTFSDWPADAPVQPEDLAAAGMYYLGTNDKVKCF
CCGQQLEGWEPGDEAWGEHAKHYPNCFFILGHDVGNVPLTTPSPRVNGQKAFVETFEGRL
ESFRGRQHPIDPERLARAGFYSTGKQDHVLCFKCGGGLKGWSPDEDPWEEHARNYPGCSF
LLAEKGREYVNSMQLRYPTGDHSHSRPSQNGFSSHEKEDPMTKLEKLQMEKLCKVCMDGD
INIVLIPCGHLVTCQKCSEPLNKCPICCAAITQKIKTYSA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcatcaccgagcaacaatggcatgctcaagtcaagatggtgaaatagaagct
gataatgcatggtcatccatgcctaatcgcgtgagttccttccagtgcttccctcgatct
gaagaattttcagccaagcggctggcccgggcaggcttttatttcacaggtcaggcagac
agggtgtgctgttttagctgccatgcgtcagtggaggactggaacaaaggggacgcccca
ctgaagagacatcagcaagcatctcccaactgcaggttcctcagctgtgctcatggtttg
agagcctccgactgcactcaaagccctgtttatgacgaagaggccgaagccatggagttc
cagctccgcaccggagcagtggtggatcagaccatttatcccgctgtggcacacatgaag
agtgaggaagctcggctgaatactttcagtgattggcctgcagatgctccggttcagcct
gaagacctggcagcagcagggatgtattacttaggaacaaatgacaaagtgaaatgcttt
tgctgtgggcaacagctggaaggatgggagccaggagatgaagcctggggtgaacatgca
aagcactatccaaactgcttcttcatcttgggccacgatgtgggcaatgtgccgctgaca
acacctagtcccagggtaaatggacagaaagcctttgtggagacttttgaggggcgtctt
gaaagcttcagaggtagacagcatcccatagaccctgagagactggccagagctggtttc
tacagcacaggaaaacaggaccatgtgctctgcttcaaatgtggaggaggactgaagggg
tggagtcctgatgaagacccttgggaagagcatgcaaggaactatccaggctgcagtttc
cttctggcagaaaaaggaagagaatatgtcaacagcatgcagctgagatatccaacagga
gaccattctcattcaagaccgagtcagaatggtttttcaagtcacgagaaagaggacccc
atgacgaaacttgagaaactccagatggagaaactctgtaaagtctgcatggacggtgac
attaacatcgtcttgattccctgtggacacctggtcacctgtcagaaatgctctgaaccc
ctgaacaagtgtcccatctgctgtgccgccatcacgcagaagatcaagacctacagtgcc
taa
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