Carassius gibelio (silver crucian carp): 127975799
Help
Entry
127975799 CDS
T08819
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127975799
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127975799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
127975799
NCBI-ProteinID:
XP_052435740
LinkDB
All DBs
Position
B17:complement(4363302..4403124)
Genome browser
AA seq
1790 aa
AA seq
DB search
MKRSKHRASKDDGKGQDEPAILETEDMRMPDPDTISLASVTAVTTNVSNKRSKPDIKIEP
SAGRPVDFQVNVTVIEARQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYFVFDFH
VPPDVLFDKILKVSVIHSKNLLRSGTLVGSFKLDVGTVYTQPEHQFFHKWATLCDPDDIT
AGCKGYVKCDIAVVAKGDTIKTPHKANETDEDDIESNLLLPEDVPAERQWARFYLKIYRA
EGLPKMNTSIMANVKKAFIGENKDLVDPYIQVQFAGQKGKTSIQKSSYEPIWNEQIVFTE
QFPPLCRRMKVQLRDSDKVNDVAIGTHFIDLQKIANDGDKGFLPTLGPAWANMYGSTRSY
TLMDEYQDLNEGLGEGVSFRARLLISLSVEILDTSSPDVMSSTEVQVEGIPNIPDNATGK
LEEFFLFGCFLEATMIDRKIGDKPINFEVTIGNYGSEVDTPTKPKTKNKKGGDGDDEESE
LIHGSSDEEVDDSGDMTSVSTTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLY
NANIIDRIADKLEDGLNDVQEIIKTEKAYPERRLRGVLEELSNGCSTFVTLANNDQNQAG
KTKLDRERLKLCMQELENMGQQAKNMRSQVKKSNVKDKIKLAQNFLHKLRFLSDEPQHSV
PDIYIWMISNNKRIAYARVPSKDILFSSVDEETGKDCGKVQTIFFKLPGKKSFGPAGWTV
QAKTELYLWLGLNKQRKDYLNGLPNGFEENKAVKVPGIHSSPPISLIYTMKQIFQLRVHL
YQARSLFAADSTGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLLVFDNVELYGEAGELR
DDPPIIVIEIYDQDTVGKADFMGRTFAKPLTKMSDEYYGPPRFPPQLEYYQIYRGNCTAG
EMLAAFELLQIGPAGKADLPPIDGPSDFDRGPILPVPIGIRPVLSKYRIEVLFWGLRDLK
RVNLAQVDRPRVDIECAGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRV
VDCRAFGRYTLVGSNAVTSLRKFIYRPSDKSVNSWSAMEEVVIHTEPEPVVKKTETVVKL
DSASDAVVKIDMPDDEKGGKGKKKRKKGEEAEEEELDESMLDWWSKYFASIETLTEIIKA
QEAEAEEKEDFESGEGKSTKYVPHASEMKGTRKKRGKGNKNKAMPAQVPEKKHKIEELKM
YNRELEYEFDTFEDWLHTFNLYRGKCSDDADVEQNAADEDRLIGKFKGSMCIYKVQALED
VSREMSFDANMGMFQNIPHNDPVNVLVRVYVIRATELHPADINGKADPYISIKLGKTEIK
DKENYISKQLNPVFGKSFDIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRYYSK
HRATCGLSASYAIHGYNVWRDPMKPTQILAKLCKDGKMDPPQYGPGGKVKVANRVYTGPT
EIEDENGLKKQTDEHLALAVLNRWEDMPRIGCKLVPEHVETRRLLNPDKPGMEQGRIELW
VDMFPKDMPAPGPAVDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLK
GQQEDKQDTDVHYHSLTGEGNFNWRFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPAR
LNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSIDMVINEQDMPMVNIFKQKRIK
GWWPFVARDENDELEITGKVEAELHLLTGEEAEKSPVGEGRNEPEPLEKPNRPDTTFLWF
LIPLKAVRHLVCNQYKWLVIKIVLVLLLLAMLGLFLYSMPGYMVKKLLGA
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaagcaagcatcgagcttccaaggatgatggcaaaggtcaagatgagccggcc
attctggagacggaggatatgaggatgccagaccctgacaccatctcactcgcatcagtc
actgccgtcacaaccaatgtctccaataaaagatcaaagcctgacatcaagattgagcct
agtgctggaagaccagtggatttccaagtcaatgtcactgttatagaggccagacagctg
gtgggtctgaacatggatccagtggtgtgtgtagaaattggtgatgaaaaaaaatacacc
tcaatgaaggagtcgaccaactgcccttactacaatgagtacttcgtttttgacttccac
gttcctcctgatgtcctgtttgacaagatcctgaaagtttctgttatccattctaagaat
cttttgcgaagtggtacgctggtcgggagcttcaagcttgacgtgggcacagtttataca
caacctgaacatcagtttttccacaaatgggccactttatgtgaccccgatgatatcact
gctggatgcaaaggctatgtcaagtgtgacatcgcagttgtggcgaagggcgacactatc
aaaactccccacaaagcaaatgagacagatgaggatgacattgagagtaatcttctgttg
ccggaagacgtcccggctgagcgtcaatgggcaagattctatttgaaaatctaccgagcc
gaggggttgcccaaaatgaacaccagcataatggcaaatgtcaaaaaagctttcattgga
gaaaataaggacttggttgatccatatatccaagtgcaatttgcagggcagaagggtaaa
acttcaattcagaagagcagctatgagcctatctggaatgagcaaatagttttcactgag
cagtttccaccactgtgccggagaatgaaagtccagctccgtgattcggataaagtgaac
gatgtggccatcggaacgcacttcattgacctgcagaagattgctaatgatggagacaaa
ggctttcttccaactcttgggccggcttgggccaacatgtacgggtccacacgcagctac
acgctcatggacgagtaccaggacctgaatgaaggactaggggaaggggtgtctttcagg
gcccggctgctgatcagtctgtctgtggagatactggacacctcctctcctgatgtaatg
agctccactgaggtgcaggtggaggggatacccaacatcccagataatgccacaggaaaa
cttgaagagttctttctctttggatgtttcctcgaagccactatgattgacaggaagatt
ggagacaaacccatcaactttgaggttacaataggaaactatggcagtgaagtcgatacc
ccaaccaagccaaaaacaaagaataagaagggtggcgatggagatgacgaggagtctgag
ctcattcacgggtccagtgatgaggaggtggatgatagtggagatatgacatcagtttcc
accactcctccaatgaaaccagtcatcactgacagaaactatttccacctcccgtacttt
gagaggaagccctgcatctatatcaagagctggtggcaggaccaaagaagacgactttat
aatgctaacatcattgacagaattgcagataaattggaagacgggttgaatgatgtgcag
gagatcattaaaacagagaaagcctatcctgagcgcagactcagaggagtcctggaggaa
ctcagcaatggctgcagtacctttgtaactttggcaaacaatgatcagaatcaggctggg
aagactaaactggaccgggagagactgaaattgtgcatgcaggaattggaaaacatgggc
cagcaagcaaagaatatgcgatcacaagtaaagaaaagtaatgttaaagacaaaataaaa
ctggcacaaaacttcctccacaagctgagattcttgtctgatgagcctcagcatagtgtt
ccagatatttacatatggatgataagcaacaacaaacgcattgcatatgcccgcgttccc
tccaaagacatcctcttctcttctgtggatgaagaaaccggaaaggactgtggaaaagtc
cagaccatctttttcaagctccctggtaagaaaagctttggacctgcaggctggaccgtt
caggctaaaactgagctgtatctgtggctcggcttgaacaagcagcgtaaggactactta
aacggcctaccaaatggttttgaggagaacaaggcagtaaaagtgcctggcatacattct
tcgccccctataagcctgatctacacaatgaagcagatcttccagctgagggttcacttg
taccaggctcgcagtctgtttgcggctgacagcacaggtctgtcagacccttttgccagg
gtctttttctccacccacagccaggtcacagaggtcctgaatgagacgttgtgtcctaca
tgggatcagctgctggtgtttgataatgtggagctctatggtgaggctggtgaactgaga
gatgatcctcctataatcgtcatcgagatctatgatcaggacactgtcgggaaagccgat
ttcatgggcaggacatttgcaaaacctttaaccaagatgtcagacgagtattatgggcca
ccacgcttccctcctcagctggagtactaccagatctaccgggggaactgcactgcagga
gaaatgctggcggcctttgaactgctgcagattggaccagctggaaaggccgacctgccc
ccaatagatggcccttcagatttcgatcgtggtccaatcctgcctgttcctattggcata
agacctgtcttgagtaaataccgaattgaggttctcttctggggcctgagggacctgaag
cgagtgaatctggctcaagttgaccgtccccgtgtggacatcgagtgtgcagggaaaggt
gttcagtcagcgctgattcagaactacaagaaaaaccccaacttcagcactctggtcaag
tggtttgaagtggacctgccagaaaacgagctcctccaccctcctctgaacatccgtgtg
gtggactgccgggcatttggtcgttacacactagttggctctaatgccgtcacatctcta
cgcaagttcatttacaggccatcggacaagagtgtcaatagctggtctgccatggaggag
gttgtgatccacacagagccagaaccagttgtgaagaagactgagacagtggtcaaactc
gactcagcatctgatgccgtggttaagatcgatatgccagatgatgagaaaggtgggaaa
gggaaaaagaagcgaaagaagggtgaagaggcggaagaggaggagctggatgaaagcatg
ctggactggtggtccaaatactttgcctccattgaaactctgacagagatcattaaagca
caagaggcagaagctgaagaaaaggaagattttgagtctggagaaggtaagtctaccaaa
tatgtccctcatgcctctgaaatgaaagggaccaggaaaaagagaggaaaaggaaacaag
aacaaagccatgcctgcacaagtaccagagaagaagcacaaaattgaagagctgaagatg
tacaacagagagcttgaatatgagtttgacacctttgaagactggcttcacacttttaac
ctttatcgaggcaagtgttcagatgatgctgacgttgagcagaatgcagctgatgaagac
agactgattggcaaattcaagggatccatgtgcatctacaaagtccaagcattggaagat
gtgtccagagaaatgagctttgatgctaacatgggcatgttccagaacatcccacacaac
gaccccgttaacgtcctcgtccgagtctatgtgatccgggcaacagaactgcatcctgca
gacatcaatgggaaggccgacccgtatatctccatcaagctcgggaagacagagatcaag
gacaaagagaactacatctccaaacaactcaaccctgtgtttggaaagtcttttgatatt
gaagcgacgctcccgatggattccaccctcaccgtgtccatctacgactgggatttggtg
ggaaccgatgacctgattggggagacaaagattgacttggagaaccgttactacagcaag
cacagggcaacatgtggtctcagcgccagctacgcaattcatggctataatgtgtggagg
gacccaatgaagccaacccaaatccttgccaaactctgcaaagatggaaaaatggatccg
ccccagtacggcccagggggaaaagtcaaagtggcgaacagagtttacacgggaccgact
gaaattgaagatgaaaatggactgaagaaacagacagatgagcacctggctcttgctgtt
ctaaaccgctgggaagatatgccacggatcggctgcaaactcgtcccagagcacgtggag
acgagacgtctgctgaatccagataaacctgggatggagcaggggaggattgagttgtgg
gtggacatgttcccgaaggatatgcctgcgcctggacccgctgtcgatatttcaccaagg
aagccaaagaagtttgagctcagggtgatcgtgtggaacacagacgaagtcgttctggag
gacgatgacatcttcacgggggaaaaatccagtgacatatttgttagaggatggctgaaa
ggtcaacaagaagacaagcaggacacagacgtccactatcactctttgaccggagagggc
aatttcaactggcgcttcatttacccctttgactacctacaagccgaagagaaaatcgtc
atctcaaagaaagagtccatgttttcttgggacgagacggagtataaaattcctgctcga
ctgaatttgcaagtgtgggatgcggatcacttctctgcagatgacttcttgggtgcaatt
gaactagacctgaaccggtttcctcgtggtgcgaagacagccaagcagtgctccattgat
atggtgataaacgagcaagacatgcccatggtcaacatcttcaaacagaagagaatcaaa
ggctggtggccatttgtggcccgggatgaaaacgatgagctggaaattacaggaaaagta
gaagcagagcttcacctgctgacaggtgaggaggccgagaagagtcccgttggtgaagga
cgcaatgaaccagagcctctggagaaaccaaaccgccccgacactacattcctgtggttc
cttatcccgctaaaggcagtccgtcatctcgtctgcaaccagtacaagtggctggtcatc
aaaattgtgttggttctgctgttattagcgatgctgggcttgtttctgtacagtatgcca
ggttacatggtgaaaaagcttctaggggcttga
DBGET
integrated database retrieval system