KEGG   Carassius gibelio (silver crucian carp): 127976391
Entry
127976391         CDS       T08819                                 
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04620  Toll-like receptor signaling pathway
cgib04621  NOD-like receptor signaling pathway
cgib04622  RIG-I-like receptor signaling pathway
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127976391
   04621 NOD-like receptor signaling pathway
    127976391
   04622 RIG-I-like receptor signaling pathway
    127976391
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127976391
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4_2 zf-C3HC4 EzrA RING_XB3-XBAT31 zf-TRAF_2 Crescentin Sina_ZnF Spectrin_Anc-1 zf-rbx1 zf-RING_UBOX zf-RING_2 FPP BLOC1_2 zf-RING_4 FapA zf-RING_6 Laminin_II Exonuc_VII_L DUF2203 ATG16
Other DBs
NCBI-GeneID: 127976391
NCBI-ProteinID: XP_052436740
LinkDB
Position
B17:14988735..15004758
AA seq 570 aa
MSAGRNVEQQIALQQRPPSLAMPSMAQRPRAEPGFLPQHGGFRDHFVTTPEAKYRCESCR
LVLCSPRQTECGHRFCESCITDLLSKPNPICPADLEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLGKCKEKMMRKDMSEHLSRKCKHREITCE
FCNHKMALTELQKHKDTVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRYG
CSFKGLNQAMREHESSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQYEEMREKNRQLEQKLVSMQMLMSSHSEKLLEVEMELRELRAMREEVEALRGSVENMR
SIVSSLDPGRVGSSSGSHTLGSLEQQLSRHDDLMSVHDIRLAEMDLKLQVLETASFNGTL
IWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVM
RGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCPLFV
AQTILENGTYIKDDTIFIKVTVDTSDLPDP
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctt
gccatgccctccatggcccagcggcccagggcagagccaggcttcttaccccagcacggt
ggatttagggaccacttcgtcacgacgcccgaggccaagtatcgctgcgagtcttgcagg
cttgtgctctgttcccctcgccaaacggagtgtggacatcgcttctgcgagagctgcatc
acagacctgctcagtaagcccaacccaatttgtccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaacagggaaattatggctctgaaagtctactgc
cgaagtgagaaaaatggatgtaaagaacaaatgagtttacagcaggtcatggaccacttg
gaagtttgtccgtacttcgaggtgccatgccccttgggaaagtgtaaggagaagatgatg
aggaaagacatgtctgagcacttgagccgcaaatgcaaacaccgagagatcacctgtgaa
ttctgcaatcacaagatggccctcaccgagttacagaaacacaaagatacagtctgtcct
gcgtttcctgtagcatgccctaatcactgctccttttcttccattctaagaagtgagctt
tccagtcatcagcatgactgtccaaaggctcaagtgacctgctcctttattcgctacgga
tgctcctttaaggggctgaatcaagcgatgagggaacatgagtccagttttgcgtccgag
cacctgagaatgatggcagtcagaaacaccacgctagaagccaaggtagaggatgttaag
agcgagctgatggagcgttataaagtcctgcccagcctcagcagtcgtctggcagaggtt
gagactcagtatgaggagatgagagagaagaacaggcagctggagcagaagctagtcagc
atgcagatgctgatgagctctcactcagagaaacttcttgaggtcgagatggagctgcgg
gagctgcgagccatgagggaggaggtggaggctctgagaggctccgtggagaacatgcgt
tcaattgtatcttctctcgacccgggtcgtgttggttccagttctggatctcacacgctg
ggctccttagagcagcagctctcccgtcacgatgacctgatgagtgtccatgacatccgc
ctggcggagatggacctgaagctgcaggtgctagagacggccagcttcaacggtacgctc
atttggaagatccgtgactacaaaagacggaaacaggaagccgtggcctcaaaaactctc
tcgctctacagccagcccttctacacgggctatttcggctacaagatgtgtgcccgcgtc
tatctgaatggagacggaatgggtaaaggcacccatctctcgctgttcttcgtggtcatg
cgtggggaatacgatgccttgctgccgtggccgttcaaacagaaagtaacattaatgcta
atggaccaggggccggcaaggaaacacttaggcgatgcatttaaaccggacccaaatagc
agtagctttcgccggcccactgctgaaatgaacatcgcctcgggctgtccactctttgtg
gctcaaactatcctggagaacggaacctacatcaaagacgacaccatcttcattaaggtg
actgtagacacctccgacctcccggacccttga

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