Carassius gibelio (silver crucian carp): 127978542
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Entry
127978542 CDS
T08819
Name
(RefSeq) exostosin-1c-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgib01100
Metabolic pathways
Module
cgib_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
127978542
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgib01003
]
127978542
Enzymes [BR:
cgib01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
127978542
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
127978542
Glycosyltransferases [BR:
cgib01003
]
Glycan extension
O-Glycan
127978542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
127978542
NCBI-ProteinID:
XP_052439227
LinkDB
All DBs
Position
B19:25047216..25116669
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AA seq
737 aa
AA seq
DB search
MQARKKYVLLGLCTCCWLLLYYWGGLQERLLGLLTHRRGEVVRPWPNWLDRDLLPGYTDQ
AELQNDGGQGDSPKQRRQSWAGIYKDSRCRMDTCFDFARCQGQSGFRVYIYPPEKGERVS
ESYRKILNSVAESRYFTSDPREACLFVLGIDTLDRDQLSTQFVPNMDERIRGYPLWNDGR
NHVIFNLYSGTWPNYTEDLGFNVGQAILAKASLNTEHFRPGFDISIPLFSKEHPQKGGER
GWLVRNTVPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWEKHK
DARCDHDNQEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWELPF
SDVIQWNQAVIEGDERLLLQVPSTVRAVGNDRVLALRQRTQMLWEAYFSSVDKIVLTTLE
IIKDRVYSHISRNKFMWNALPGGLLVLPEYSTHLAHYPFYYLNLGISPGQEFTAVIHATS
PLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPPPHRSKWPPMPVPLLITDGRRKTSSR
FLPNAAVETEAVLSLDEDTVLLTSEINFAFHVWRSFPERIVGYPPRSHFWDPVKKAWGYT
SKWTNEYSIVLTGAAFYHRYYHHLFSHYLPSSLRALVDRTSNCEDILMNFLVSSVTHLPP
IKVAQRKQYKEMPTQQGTKMAPWVNPEHFTQRQECVNTIASWFGYMPLVHSQFRLDPVLF
KDHVSILRKRYKDLERV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacgcaagaagtacgtgcttctgggcctgtgcacgtgctgctggctgttactc
tattactggggtggcttgcaggaacggctcctgggcctcctcacccacaggaggggggag
gtggtgcggccctggcccaactggttggatcgggacctgctccctggttacaccgaccag
gccgagctacaaaatgatgggggtcagggtgactctccaaagcagcggcggcagtcatgg
gccggaatctacaaggacagtcgctgcaggatggacacctgctttgacttcgcccgatgt
caaggacagagcggctttcgggtctacatctatccaccggagaagggcgaacgggtgtct
gagagttaccgcaagatcctcaactcagtcgcggagtcgcggtatttcacgtcagaccct
cgagaggcatgtttattcgtgctgggcatcgacacgctggacagggaccagctttcgacg
cagtttgtgcccaacatggacgagcgaattcgaggttacccgctctggaatgatgggcgg
aaccatgtcatcttcaacctttattccggaacctggcccaactacaccgaggacttgggt
tttaacgtgggccaggctatcctggccaaagcaagcctgaatacggaacacttccgaccg
ggctttgacatttccatccctttgttctctaaagaacaccctcagaagggtggagaaagg
ggctggttagttcgcaacaccgtcccgccgagacggaagtacttgttgatgtttaaaggt
aaacgttacttgacgggcatcggctcagacactcgcaacgctttgcatcacatccacaat
ggcaaggacatcgtctcactaactacgtgccgccacggcaaggactgggagaagcacaag
gacgcgcggtgtgaccatgataaccaggagtatgagagatttgactatcaggagctgctc
cacaactccaccttctgtctggttccccgcggtcggcgcttggggtcgttccgtttcctg
gagtctttgcaggccgcttgtatcccggtgttactcagtaatggctgggagttacctttc
tctgatgtcatccagtggaaccaggcagtcatcgagggcgacgagagactgttgctacag
gtaccatccacggtgcgggctgtgggcaatgacagggtgctggctctcagacagcgtaca
cagatgctctgggaggcctacttctcctccgtggataagattgtactcaccacactggag
atcataaaggacagagtgtactcacacatctccagaaataaattcatgtggaatgcctta
cctggagggctgctggttctgcccgagtactcaacgcacttggcacactaccccttctat
tatttaaaccttggaatcagtccaggtcaggagttcactgctgtaattcatgccacctca
cctctggtctcgcagtctcagccaatcatgaagcttcttcaggtcgtctccaaatcaaaa
tactgctcacagatcatcatcctgtggaacagtgagaagccaccccctcaccggagtaaa
tggccgcctatgccagtgccccttctcatcacagatggcagaaggaaaacgagcagccgt
ttcctgcccaatgcagctgttgagacggaggcagttttgagcctagatgaagacacagtg
ctgttgaccagcgagatcaattttgctttccatgtgtggcggagtttccccgagaggatt
gttggctaccctcccagaagccatttctgggaccctgtaaagaaagcctggggctacacc
tctaaatggaccaacgagtactccatcgtcctcaccggagcggcattttatcacaggtac
taccatcacctgttctctcactacctgccctcctctctgcgtgcgctagtggatcgcacc
tctaactgtgaggatatcctgatgaacttcctggtctcctctgtgacacacctgccaccg
attaaagtagcgcagaggaagcagtacaaagagatgcccacccagcagggtactaagatg
gccccatgggtgaaccctgagcactttacccagaggcaggagtgcgtcaacaccattgca
agctggtttggttacatgcctctagtgcactctcagtttcgcctggaccccgtactcttc
aaggaccacgtgtccatcctgcgcaagaggtacaaagacctggagcgtgtctga
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