KEGG   Carassius gibelio (silver crucian carp): 127978790
Entry
127978790         CDS       T08819                                 
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04010  MAPK signaling pathway
cgib04060  Cytokine-cytokine receptor interaction
cgib04150  mTOR signaling pathway
cgib04210  Apoptosis
cgib04217  Necroptosis
cgib04350  TGF-beta signaling pathway
cgib04620  Toll-like receptor signaling pathway
cgib04621  NOD-like receptor signaling pathway
cgib04622  RIG-I-like receptor signaling pathway
cgib04625  C-type lectin receptor signaling pathway
cgib04920  Adipocytokine signaling pathway
cgib05132  Salmonella infection
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127978790
   04350 TGF-beta signaling pathway
    127978790
   04150 mTOR signaling pathway
    127978790
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    127978790
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    127978790
   04217 Necroptosis
    127978790
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127978790
   04621 NOD-like receptor signaling pathway
    127978790
   04622 RIG-I-like receptor signaling pathway
    127978790
   04625 C-type lectin receptor signaling pathway
    127978790
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    127978790
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127978790
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127978790
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cgib04052]
    127978790
   00536 Glycosaminoglycan binding proteins [BR:cgib00536]
    127978790
Cytokines and neuropeptides [BR:cgib04052]
 Cytokines
  Tumor necrosis fators
   127978790
Glycosaminoglycan binding proteins [BR:cgib00536]
 Heparan sulfate / Heparin
  Cytokines
   127978790
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 127978790
NCBI-ProteinID: XP_052439647
LinkDB
Position
B19:15340056..15342233
AA seq 228 aa
MMIDVESQLAEEGAQVTVSRRRSGVWRVCGVLLAVALCAAAAVCFTFNKSQNNQESGNEL
RLTLRDHLSKENVTSKAAIHLTGAYDPDVCTDNLDWKQNQDQAFVSGGLKLVDREIIIPY
DGIYFVYSQVSFHISCKADVTEEHEGVHMSHAVLRFSESYASYKPLFSAIRSACVHATDT
EDLWYNTIYLGAAFNLRAGDKLRTDTTTELLPRVESENGKTFFGVFAL
NT seq 687 nt   +upstreamnt  +downstreamnt
atgatgatagatgttgagagtcagttagctgaagaaggagcgcaggtgacggtgtcgagg
aggaggtccggtgtctggcgggtgtgtggggtcctgctggctgtggccctgtgtgccgcc
gccgctgtctgcttcacattcaacaagtctcagaacaatcaggaaagtggaaatgagctg
aggctcacattaagagaccatctttcaaaagaaaatgtcacttccaaggccgcgatccat
ttaacaggtgcatatgaccctgacgtgtgtacggacaacctagactggaaacagaaccag
gaccaggcttttgtttcaggtggcttgaaactagtggacagagagatcatcattccttac
gacggcatttacttcgtctacagtcaggtgtctttccacatcagctgcaaggctgacgtg
actgaggaacacgagggcgtgcacatgagccacgcagtgttgcgcttctcggagtcctac
gccagctacaagccgctcttcagcgcgatccgctcggcctgcgtgcacgcgactgacact
gaagacctgtggtacaacaccatttacctcggagcagccttcaacctgcgagctggagac
aaactgcgcaccgacaccaccacagaactcctgccccgcgtggaaagcgaaaacggaaag
accttctttggggtgtttgctttatga

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