Carassius gibelio (silver crucian carp): 127983447
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Entry
127983447 CDS
T08819
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127983447
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127983447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
127983447
NCBI-ProteinID:
XP_052441601
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All DBs
Position
B20:complement(10754758..10809971)
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AA seq
2044 aa
AA seq
DB search
MALVVYLKTVTELRGKGDRIAKVTFRGLSFFSRVLENCEDEARFEQAFRWPIGSQVDGDE
MLEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGHLEVSDTLIDDNNSAIRTSISIEIKYQT
MDGSVKVWSDGEFLDIPDDCDGTFQFETDSLLSGRSQSSGTSPGRSIHGIPTFRKTGKGV
FSAMKLGKTRISKDDHKKGDDAAILDAEDLDRKTMRLGGGLDPDTISLASVTAVTTNVSN
KRSKPDIKMEPSSGRLVDYQISVTVIEARQLVGLNMDPVVCVEIGEEKKYTSMKESTNCP
YYNEYFVFDFHVPPDVMFDKILKISVIHSKNLLRSGTLVGTFKLDVGTVYSQAEHQFHHK
WAMLSDPDDITAGCKGYVKCDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPSERQ
WARFYVKIYRAEGLPKMNTSIMANVKKAFIGENRDLVDPYVLVQFAGQKGKTSVQKSSYE
PIWNEQVIFTEMFPPLCRRLKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTMGPA
WVNMYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLISIAVEILDPSSAEIMSSTEVQIEP
VSNMSESATGKMEEFFLFGSFLEATMIDRKIGDKAISFEVTIGNYGNQIDGVSKPASAKK
KKEGGGESEEEETELIHNSSDEEGEDDGDLTSVPSTPPMKPVITDRNYFHLPYFEKKPCI
YIKSWWQDQRRRLYNSNIMDKIADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSTSCS
RFVTLANKDQNLSGRTKLDKERLKSCMRELESMAQQAKTIRSQVKRNTVRDKLKLVLNFL
HRLRFLADEPQHSIPDVFIWMISNNKRIAYARIPSKDILYSIVDEEMGKDCGKVKAVFLR
LPGKKGFGPAGWTVQAKLEMYLWLGLNKQRRDFLSGLPSGYEENKATKGTGIQAVPPISL
VYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQLLV
FDNVELYGEAGELRDDPPIIVIELYDQDTVGKAEFIGRTFAKPLTKMVDEHYGPPRFPPQ
LEYYQIYRGNCAAGDLLAAFELLQIPYDDEEIRRALIAVHDFAVPQIKIGPAGRAALPPI
DGPTDSDRGPILPVPLGIRPVLSRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGKGVQ
SALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVTSLRK
FIYSPPDKTANNWAHTARLANGYMALTNGTSHSRPHSRPISHPSGEIVVNMDPEPHIKKM
DTVVKMDATTDAVVKVDLNEDEKEKEKKKKKKKKGEEVDEEEPDESMLDWWSKYFASIET
MMENLRAQEAALAEAEEREDLEIAAESAEIKADDFPMKGTKPKEKSKDKKSSKDKKKNHD
GTDKRPPKPKVDELMVYNKELESEFGSFEDWLHTFNLFRGKAGDDIDHNVVDDDRIVGRF
KGSLCMYKLPLSEEIIRDAGFDPNMGMFQSIPHNDPINVLIRIYIIRATDLHPADINGKA
DPYIVIRLGKSEIRDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLI
GETKIDLENRYYSKHRATCGIASNYSVHGYNVWRDPQKPTQILAKLCKEAKLDGPNYGPG
GKVKVANRIFLGPTEIEDESGLKKQTEEHLALTVLRHWEEIPRVGCKLIPEHVETRPLLN
PDKPGIEQGRIEMWVDMFPMDVPAPGPAIDISPRKPKRYELRVIIWNTDEVILEDDDYFT
GEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVFPFDYLMAEEKIVISKKES
MFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNKFPRGAKTAKQCSLNMVLKEH
ELPTISIFKQKRVKGWWPFVARDENDEFELTGKVEAELHLLTAEEAEKNPVGLGRNEPEP
LEKPNRPDTTFLWFLSPLKAIRYLICNRYKWLIIKIVLALLLLIMVGLFLYSMPGYLVKK
LLGA
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtagtgtacctgaagactgtcacggagcttcgtggaaagggggaccgcatc
gctaaagtgactttcagaggtctctcctttttctcccgggtgcttgaaaactgcgaggat
gaagctcggtttgagcaggcattccgctggccaattgggagtcaagtggacggcgacgag
atgctggagattcaagtgtttaattacagcaaagtcttcactaacaggttaattggcact
ttccgcatggttctgcagaaggtggtggaggagggtcacttggaggtgtctgacactctt
attgacgacaataactcagccatacggacaagtatttccatagagatcaaatatcagacc
atggacgggagtgtgaaggtatggagcgatggtgaattccttgatattccagatgactgt
gatggaactttccagtttgagacagacagtctactctctggacgcagccagagctctggg
acatcacctggacgttctatccacggcattcccacattccgcaagacaggaaaaggagtg
ttttcagccatgaaactgggaaagacgcgcatctctaaagatgaccacaaaaaaggagat
gacgctgccattttggatgcagaagatcttgatcgaaagaccatgcgtctgggcggtggg
ctcgaccctgataccatctcactggcctctgttactgcagtaaccacgaacgtctccaac
aaaagatcaaagcctgacattaagatggagcccagttcagggcgtcttgtggattatcag
atcagcgtaacagtaatcgaggcccgtcagttggttggtttgaacatggatcctgtggtt
tgtgtggaaattggcgaggagaagaagtatacatcgatgaaggagtccacaaactgcccc
tactacaatgagtactttgtctttgacttccatgtgcctccagatgtcatgtttgacaag
atcctgaagatttcggttatacattctaaaaaccttctacgaagcggtactctggtgggg
accttcaaactagatgtgggaactgtttactcacaagctgagcatcagttccaccacaaa
tgggcaatgctgtcggaccctgatgacatcacagccggctgcaaaggttacgttaagtgt
gatattgcagtcgtaggaaaaggagacaacatcaagacaccgcacaaggccaatgaaaca
gatgaggatgacatagaggggaatcttcttttgccggagggtgttccatcagagagacaa
tgggctcggttttatgttaagatttacagagctgagggactaccaaaaatgaacaccagc
atcatggccaatgtgaaaaaagcatttatcggggagaacagggatcttgtggacccttat
gtcctggtgcaatttgcagggcagaagggtaaaacgtcagttcagaagagcagctacgag
cccatctggaatgagcaagtaatcttcaccgagatgttcccacctttgtgtaggcgactg
aaagttcagatccgtgattcagacaaggtgaatgatgttgccataggaacccatttcatc
gatctacgaaagatcgcaaacgatggagacaaagggttcctacctactatgggcccagcc
tgggtgaatatgtatggttctacccgtaactacaccctgatggatgagcaccaggaccta
aatgaggggctgggggaaggtgtgtcttttagggcacgcctcctcattagtatcgcagtg
gagatcctggacccctcctctgcagaaataatgagctctactgaggtacaaatagagccg
gtgtccaacatgtcagagagtgccacggggaagatggaggaatttttcctttttggatcg
ttcttggaggccacaatgatagacagaaaaattggtgataaagccatcagctttgaagtc
actatcggtaactatggtaaccagattgatggagtgagcaagcctgcatcagcaaagaag
aagaaagagggtggaggggagagtgaagaagaggagactgagctcatccataactccagc
gatgaagagggagaggatgatggagatttgacatctgtgccgtccacccctcctatgaaa
ccagttataactgacaggaattacttccacttgccttactttgaaaagaaaccctgcatt
tacatcaagagctggtggcaagatcagaggagacgactctacaactccaatataatggac
aagattgcagataaactggaggaaggtctgaatgatgttcaagaaatcataaaaacagag
aaagcatatccagaacgcagacttcgaggagttttagaggagcttagcacaagttgcagt
cgatttgttacactggcaaacaaagatcagaatctatccggaagaaccaagctggacaaa
gagaggctcaagtcctgcatgagagagttggagagtatggctcagcaggcgaagactatc
cgctcacaggtgaagagaaacacagttcgagacaaactcaagctagtgttgaatttcctt
cacaggcttcgtttcctggcagatgagccccagcacagcatccctgatgtgttcatatgg
atgattagcaacaacaaacgcatagcgtacgcccgcattccctccaaagacatcctctac
tcaattgttgacgaagagatgggaaaggactgtgggaaagttaaagctgtttttctcagg
ctgcctggaaagaaaggctttgggcctgctggctggacagttcaggctaaactggagatg
tatttgtggctgggcttgaacaaacagaggagggacttcttgagcggcctccctagcggc
tatgaagaaaacaaggctactaagggaaccggcattcaagctgttcctcccatcagcctg
gtttataacatgaagcaggtgtttcagctgagggcccacatgtatcaggctcgcagtctg
tttgctgctgacagtagcggcctgtctgacccttttgcaagggttttcttctccacccac
agccaggtgacagaggtcctcagtgagactctttgtcctacatgggatcagttgcttgtg
tttgataatgttgaactctacggtgaggctggggaactccgtgatgatccaccaatcatt
gtcattgaactgtatgaccaagacactgtggggaaagctgagttcattgggcgaacattt
gcaaagccactaactaagatggttgatgaacactacgggccgccacggtttccccctcag
ctggagtactaccaaatctacagaggaaactgcgctgcaggagatctgttggctgctttt
gagctcctgcagattccttatgatgatgaggagatcaggagggcccttattgctgtccat
gactttgctgtacctcagatcaagattggtccagcagggcgggcagctcttcctccaatt
gatgggccgactgattctgaccgtggacccattcttcctgttccattgggcatacgacca
gttctcagcagatatcgtatagaggtcctgttctggggtctgagggaccttaaaagaatc
aatctggctcaggtggacaggcctcgcgtggacatcgagtgtgcagggaaaggagttcag
tcagccctcattcagaactacaagaagaatcctaacttcagcacgttagtaaagtggttt
gaagtggatctgccagaaaatgagcttcttcatccaccactcaatattcgggtggtggac
tgcagggcattcggacgctacaccttggtggggtctcatgccgtgaccagccttcgcaag
ttcatctacagccccccagacaagactgctaacaactgggctcacaccgctagactggcc
aatggctacatggctctcacgaatgggacatctcattcccgcccccactcccgtcccatt
tctcatccctcaggtgaaattgtggtcaacatggaccctgaaccccacattaagaagatg
gacacagttgtcaagatggatgctaccaccgatgctgttgttaaagtagacttgaatgag
gatgagaaggagaaagagaaaaagaaaaagaagaaaaagaaaggagaagaagtggacgag
gaggagccggatgagagcatgttggactggtggtccaaatactttgcctcaatagagact
atgatggagaatctcagagcccaggaggctgctctggcagaggcagaggaaagagaagat
ttggagatagcagcagagagtgcagagatcaaagctgatgactttcctatgaaaggcacc
aaacccaaggagaagagcaaagacaagaagagctccaaggacaaaaagaagaaccacgat
ggcacagataaacgacctccaaaaccaaaagttgatgaactcatggtgtacaataaagag
ctggagagtgagtttggtagctttgaggactggctccacaccttcaacctgtttagagga
aaggctggagatgacattgaccacaatgtggttgatgatgacaggattgtgggcagattc
aagggctccctctgtatgtataaactcccactgtctgaggagatcatcagggacgcagga
tttgacccaaacatgggcatgttccaaagtattcctcacaatgaccctatcaatgttctc
ataaggatttatatcattagagcaacagatctgcatcccgcggatataaatggtaaagca
gatccttatatagtcattcgattgggaaagtcagagattcgggacaaggagaactacata
tccaagcagctaaatcctgtctttggaaaatcgttcgacatagaggctacgttcccaatg
gagtccatgctgacggttgcagtatatgactgggatttggttggaactgacgacctgatt
ggtgagactaagatcgatttggagaaccgatactacagcaaacacagagccacatgtggc
attgcatccaactactctgtccatggttacaatgtatggcgtgaccctcagaagccaacc
cagatccttgctaagttgtgcaaagaagctaaactggatggacccaattatggacctggt
gggaaggtcaaagttgcaaaccgcatctttcttgggccaacagaaattgaagatgagagc
ggtctgaagaagcagactgaagaacacttggctcttacggttcttaggcattgggaggag
atcccacgtgttggttgcaaactcatccctgagcatgtggagaccagaccgctcctcaac
ccagacaagccaggcatagagcagggaaggattgaaatgtgggtggacatgtttcctatg
gatgtaccagcaccaggaccagccattgacatatcaccacgcaaaccaaagagatatgag
ctcagggtgataatatggaatactgacgaggtaattctggaagacgatgattacttcaca
ggggaaaagtccagtgacatttttgtgaggggttggctaaaaggacagcaggaggacaaa
caggacacagacgtgcattatcactctctaactggggaaggaaacttcaactggcgcttt
gttttcccttttgactatctcatggctgaggagaagatagtcatctctaagaaggaatcc
atgttttcctgggatgagaccgagtacaagattcctgctcgactcacccttcaagtatgg
gatgctgaccatttctccgcagatgacttcctgggtgcgattgagctggacttgaataag
tttccccgtggggcaaaaacagctaagcagtgctctctcaacatggttctcaaagagcat
gagctgccaaccatctccatcttcaaacagaaaagagtgaagggctggtggccatttgtg
gcccgggatgagaatgatgaatttgagctcacagggaaagtggaggcagagctccatctg
ttgacagcggaggaggcagagaaaaatccagtcggccttgggcggaatgaacctgaacca
cttgagaaaccaaaccgtcctgacaccaccttcctgtggtttttgagtccgctgaaggcc
atccgctacctgatatgcaaccgctacaaatggctcatcatcaagatcgtcttggctctg
ctgctgctgatcatggtgggcctgtttctctacagcatgccaggctatctggtcaagaag
ctgctcggggcctaa
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