Carassius gibelio (silver crucian carp): 127983957 Help Entry 127983957         CDS       T08819                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04115   p53 signaling pathway cgib04145   Phagocytosis cgib04148   Efferocytosis cgib04350   TGF-beta signaling pathway cgib04510   Focal adhesion cgib04512   ECM-receptor interaction cgib04518   Integrin signaling cgib04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cgib00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     127983957   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127983957    04518 Integrin signaling     127983957  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     127983957    04148 Efferocytosis     127983957   09143 Cell growth and death    04115 p53 signaling pathway     127983957   09144 Cellular community - eukaryotes    04510 Focal adhesion     127983957   09142 Cell motility    04820 Cytoskeleton in muscle cells     127983957  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cgib04131]     127983957   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cgib00536]     127983957 Membrane trafficking [BR:cgib04131]  Endocytosis   Phagocytosis    Opsonins     127983957 Glycosaminoglycan binding proteins [BR:cgib00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127983957 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF TSP1_CCN Zn_ribbon_NUD EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  127983957 NCBI-ProteinID:  XP_052442354 LinkDB All DBs Position B20:11754314..11765082 Genome browser AA seq 1171 aa AA seqDB search MKSAAIFLLLMLWSCESARVAESRDDNSVYDLFELVQVPKKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKHTRGSLLTVEKKDGSGPVFEIIS NGKANTLDIVFSTEDKQQVVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCKNSIITDII TLDNPINGSRPAIRTDFTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSNELRKV TDEKNMLIGGMGIRPGVCLHNGIVHKNKEEWTVDDCTECTCQNSATLCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGGWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTEKCEKSPCPVNGGWGPWSPWDTCSATCGGGVQNRKRICNNPVPMYGGKGCVGDAKASQ ICNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYTGNGITCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGQGLEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECRPGFAGNGLICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGVGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNTDQKDTDLDGVGDQCDNCPLE HNPDQVDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNKDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcagctgcaatctttttgctactgatgctttggagctgcgagagcgcgagagtc gcagaaagtcgagacgacaacagcgtttacgatctgtttgagctcgtccaagtgccgaag aaaaaccacggggtgactctggtgaaaggcgacgatccgtacagccccgcctacaagatc ctgaaccccgacctgattcccccggttcccgagagcgccttcagggacctgatcgattcc atccacgcggagagaggatttctgcttctgctcaacttcaaacagttcaaacacacgaga ggaagccttctgaccgtggagaagaaagatggctccggacccgttttcgaaataatttcc aacgggaaagccaatactctggacattgtattttccactgaagacaagcaacaggtcgtg tccatcgaggaagcggatctggctgtgggccactggaaaaacatcacgcttttcgtgcag gaggacagggttcagttctatgtgggatgcgaggaggtgaatacagcggagctcgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcctgaggattggcaag ggcgcagtgaaggacaggttcatgggggtgttgcagaacgtgcgctttgtgtttggtacc acactggaggcaattctgaggaataaaggatgcaaaaactcaattataactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgatttcactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgtgaggacctggctgccatgttc aaggagctgaaaggtcttggtgtagtggtgcaagagctgtccaatgaactccgcaaagtg acggacgagaaaaacatgctcattggtggcatgggcatccgtcctggagtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagtggacgattgcacagagtgcact tgccagaactctgcaacgctgtgccgcaagatttcatgccccctaatcccatgtgccaac gccacagtgcctgatggggagtgctgccctcgatgtggaaccccgagcgactccgctgag gatggttggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgcggccgctcctgcgaccgcatcaataacaactgcgaaggcacgtcggtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaggatggcggctggagt cactggtcaccctggtcttcctgctcggtcacctgtggtgctggtgtaatcacacgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgg caaactgaaaagtgtgagaaatcaccatgtccggtcaatggaggctggggaccatggtcg ccctgggatacttgctctgccacctgtggcggtggagtccaaaaccgtaaacgtatttgc aataacccggtacccatgtatggtggcaaaggctgtgtgggagatgcaaaggccagccag atttgcaacaaacaagcctgtccaattgatggatgcctttcaaatccatgctttgaagga gcccagtgtacaagcttcccagacggctcttggaaatgtggaaaatgccccacaggatac actggcaatggaatcacctgcaaagatatcaatgagtgtaaggaggtccccgatgcctgc tttgaatttaacggagtccacaggtgtgagaacacagtgccaggctacaactgcctgcct tgcccctcacgctacactggcccacagccgtttggtcaaggattggaggacgctgcttcc aagaaacaggtctgcacccctcgtaatccctgcctcgatggaagccacgattgcaataag aacgctcgctgcaactacctgggccatttctcagaccctatgtaccgctgtgagtgcagg cctggctttgctggaaatggactgatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaacgcaacctatcactgcaagaaggacaactgcccc aatcttcctaactctgggcaagaggactatgacaaggatggcgttggtgatgcttgtgat aatgatgatgacgacgatggcattcctgatgacagggacaactgcccactcatcttcaac ccaagacagtacgattacgatcgcgatgacgtgggagaccgctgcgacaactgtccgtac aacagcaacccagaccagaccgacactgacaataatggtgaaggtgacgcctgtgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacact gatcagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggaa cacaacccagaccaggtcgactccgattctgaccgtgttggggacaaatgtgacagcaac caggatatcgatgaggatggtcaccaaaacaacctggacaactgcccgtacatccccaac gctaaccaggctgatcacgacaaggatggtaaaggagatgcttgcgactacgatgatgat aatgacggcatccctgatgacaaagacaactgcagattggttcccaataaagatcaactg gattctgatggcgatggacgtggtgacgcctgtaaagatgactttgaccaagacaatgtc ctggatatctatgatgtctgtcctgagaactttgacatcagtgaaacagacttccgcaag ttccagatggttcctctggatcccaagggcacttctcagatcgaccccaactgggtggtt cggcaccaaggaaaagaactggttcagacagtcaactgtgaccctggcattgctgttggt tttgatgagttcaattcagtcgacttcagtggaacgttcttcatcaacactgagagggat gatgactatgccggcttcgtttttggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctaccaaagcacagggttactca gggctgtcgatcaaagtggttaactccaccacaggcccaggcgagcatctgaggaatgcc ctgtggcacactggagacactccaggacaggtgcgcacactgtggcacgacccaaagaat gtgggatggaaggacttcactgcttacagatggcacttgactcatagaccaagaactgga cacataagagtggtcatgtatgaaggcaaaaagatcatggcagattctggaagaatttat gacaaaacctatgcaggcggaagactaggtctctttgttttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgcgtaa

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