Carassius gibelio (silver crucian carp): 128004261
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Entry
128004261 CDS
T08819
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04517
IgSF CAM signaling
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128004261
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128004261
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
128004261
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128004261
Intermediate filaments
Intermediate filament-binding proteins
128004261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PAS_8
Motif
Other DBs
NCBI-GeneID:
128004261
NCBI-ProteinID:
XP_052448546
LinkDB
All DBs
Position
A5:complement(22998202..23073042)
Genome browser
AA seq
2393 aa
AA seq
DB search
MSTISPTDFDSVEIQQQYNDINNRWDIAAETEWDNENSSARLFERSRIKALADEREAVQK
KTFNKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRSDLIDFDNLKRSNAHYNLQNA
FNVAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDYA
IEADQLIEKYETLASELLQWIEQTIVTLNDRQLANSLSAVQNQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVDLGAVEAATRKHEAIETDIQAYGER
VAAVEAVARELEAERYHEVRRILARRDNVLRLWEYLKELLAARRERLNAHRDLQRLLQEM
SYIMDWTEDMKSRLQSQDSGKHLHDVEDLLQKHTLVEADISAQAERVKAVQAAAKRFTSD
EQSYKPCDPTLVEEKVDLLDRAYGELSQLAADRRARLDDSRRLWQFLWELGEEAAWIREQ
EQILSGGDYGKDLSSALHLLSKHEAFRDEMAARYSPLGNSIASGEAMVKEGHYGAPEVTE
RIKDVKAQWSHLEEASKLHEQRLKESVAFHQFQTDGNDMEAWILETLRQVSSQEVGHDEF
STQTLARKQREVEEEIQSHRPLIDSLHEQASTLPEAYAQSPQVQGRLPAIEQQYEELEGL
SSSWRQALDGALALYRMFSEASACQQWVGEKEQWLHNMEIPTKLEDLEVVQQRFETLEPE
MNTLGARITDVNQVAEQLLGSDNRNKEQIDQTQNQLNKRWSDFQSLSDQRKQALESALNI
QNYHLECNEIKSWMKEKTKVIESTQSLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLRC
EAEKLASEHPEQEEEIKGRLAEIQEVWEELRATMKRREESLGEASKLQGFLRDLDDFQAW
LSRTQTTVASEDTPTSLAEAERLLAQHEAIKNEVDNYRDDYEKMRATGVEVTQGQTDAQH
MFLAQRLQALDTGWHELRRMWESRHCVLAQAFDFQILLRDANQAEGFLSSQEYVLSHTEM
PSSLQGAVEAIKKHEDFLTTMEASEEKINGVVESGRRLISDGNTYADKIQEKTDSIQERH
QKNKQAANELLGKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGQVLVKEKPELEQTVSETMSSLQKQWDELESTTQAKAQCLF
DANRAELFTQSCSALDSWLQNISSQLQSDDFGKDLTSVNILLKKHQMLENQMEVREKEVQ
SLQSQALALAQEDSGIMEVDGQQRRVTDSFSKLQDPLRQRRQCLLASKEAHQFNRDLEDE
ILWVKERMPLTTSTDHGKDLPSVQLLIKKNQTLQKEIQGHQPRIDDIQAHGRTMSPGKES
EMDSERRAALDERLAELRELWALLISETEKRNMRLEEANRAQQFYTDAAEAEAWMGEQEL
HMMSEEKAKDEQSALVMVKKHQILEQALEDYAQTIHQLANSSRLMVNSEHPESERITLRQ
AQVDKLYAGLKDLAEERRAKLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEHV
TMLRDKFREFARDTSTIGQERVDGVNAQADDLIESGHPENASVAEWKDGLNEAWADLLEL
IDTRTQMLAASYELHRFHQDAQEALGLIKEKKETLAGAELGRDLNTVQHFLRQHTAYEHD
VQALSGQVTQVQDDAARLQKAYAGEKADDILRHERAVTEAWEGLQSATQARRLLLLDTVE
KFRFLNMVRDLMLWMEGINLQIQSHDSPRDVSSAGLVIANHQDIKSEIETRADSFSACSE
MGRTLTNNDHYASDEIQEKLDQLQAKRTEINQKWQEKMDHLQIVLEVLQFGRDASMAESW
LAGQEPLVRAAELGSNVDEVESLIKRHEAFEKLAAGWEDRFTQLEKLTTLEEQEIQRKRE
EEERARRPPTPPPVEEVVQSEINDSAARTSLDQTTLNQSVSVNGAYSDQDTSQSLLVSVS
ELQKPEPKQESKLQSYPVSKPVPKPHKAQERGSESESVNGPGRDSGLDSASRQDPSATLP
GRGGAEPTTDAMEGILCRKQEMESHNKKAATRSWQNVYCVLRKGSLGFYKDNKSAANGVP
YHGEVPISLSDAVCEVAHDYKKRKHVFKLRLGDGKEFLFQGKDEAEMSSWIQAIQSTLSS
TERSPGATRGLIRAMTMPPISPSSGDAGGVTMRNKDGKERDREKRFSFFGKKK
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctcaccgactgattttgatagcgtcgagatccagcagcagtacaacgac
atcaacaaccgctgggacatcgcagctgaaaccgagtgggataatgagaacagttctgca
cgtctctttgagcgttcccgcattaaagctctcgcagatgagagagaagcagtgcagaag
aagaccttcaataaatgggtgaactctcacctgggtcgcgtgacctgcaggattggtgac
ctctacactgacctccgtgatggacgtatgcttatccgactgctggaggtcctctctggg
gagcaactgccaaagcccaccaaaggccgtatgcgcatccactgtttggagaacgttgac
aaggctctgcagttcctgaaggaacaaaaggttcatctggagaatatgggttctcatgac
attgttgatggaaaccaccgcctcacacttggactcatttggaccataattctccgtttc
cagatccaagacattagcgttgagacagaggacaacaaagagaagaaatcagccaaagat
gctctgctgctgtggtgtcagatgaagactgcagggtacccaaatgtcaatgtccacaac
tttactaccagctggagagatggtctagcgttcaatgccatagtgcacaaacacaggtca
gacttgattgactttgataacctcaagcgctctaatgcccactataacctgcagaatgct
tttaatgtggcagagaaggagctgggtcttaccaagctactggatccagaggatgtgaat
gttgatcagcctgatgagaagtccatcatcacgtatgtggcgacatactaccactacttc
agcaagatgaaggcgctcgccgtggagggcaagagaatcggcaaggtgctggactatgcc
atcgaagcagatcagctcatagagaaatacgagactctggcctcagagctgctgcagtgg
attgagcaaaccattgttacccttaatgatcgtcagctcgctaactcactcagtgcggtt
cagaaccagctacaggcctttaatacttaccgcaccgttgagaaaccgcctaaattcact
gaaaagggaaatttggaggttttgctcttcaccattcagagtaaaatgagagcaaacaat
cagaaagtctacatcccaagagagggaaaactcatctctgacatcaacaaggcatgggag
aggctggagaaagcggaacacgagagggagttggcactgagaaatgaactgattcgtcag
gagaagctggagatgttggctgcacgttttgaccgcaaagcagccatgagagaaacctgg
ctcagcgaaaaccagcggctggtctcacaggacaattttggtgttgacctgggtgctgtg
gaagcagccactcgcaaacacgaggccatcgagaccgacatccaggcatacggtgagcgc
gtagcagccgtagaagctgttgctcgagaactggaggcagagagatatcatgaagtgcgc
cgcatactggcacgaagggataacgttcttagactttgggagtatctgaaagaactactt
gctgcacgacgagagaggctgaatgcacacagagacctgcagcgccttctacaggagatg
agctacatcatggactggacggaagacatgaagagtcgtctgcaatctcaggacagtggg
aaacaccttcatgatgtggaggacttgctgcaaaaacacacacttgtggaagctgatata
tctgcacaggccgagcgagtcaaagctgtgcaggccgctgcaaagagatttacttcagat
gaacagagttataagccatgtgaccccactctggttgaagagaaggtggatcttctagac
cgagcatacggagaactgagccagctggcagcggatcgacgagctcgactggatgactcg
cgaagactgtggcagttcctgtgggagctgggagaggaggccgcctggatcagagagcag
gagcagatcctgtctggaggagactacggaaaggacttgagctctgctcttcacctcctg
tctaaacatgaggccttcagagatgagatggcagcccggtatagccctctggggaacagc
attgcaagcggagaggccatggtgaaggaaggccactatggagcccctgaggtgacagag
cgaatcaaggatgtgaaagcacagtggtcgcacctggaggaggcttcaaagttgcatgag
cagaggctaaaagagtctgtagcttttcaccagttccagacagacggcaacgacatggag
gcctggatactggaaacactaagacaggtgtctagtcaagaagttggccacgatgagttt
tctacacagactctggccagaaagcagagagaggtggaggaggagattcaaagccaccga
ccactcatcgactcactacatgaacaggcctcaacactgcctgaagcatacgcacagtct
ccacaggttcagggccgtctcccagcaatagagcagcaatatgaagagttagaggggttg
tcgtcatcatggcgacaggccttagatggagcgcttgcgttgtatcgcatgtttagtgaa
gctagtgcctgccagcagtgggttggagaaaaagaacagtggctgcacaacatggagatt
cccaccaaactagaggatctggaggtggtccagcagaggtttgaaactctggagccagag
atgaacacactgggtgctcgcataactgatgtcaatcaagtggctgaacagctgcttgga
tcagacaaccgcaacaaagagcaaatcgaccagacacagaaccaactcaataaaaggtgg
tctgatttccagagtctgtccgaccagcgtaaacaagctctggaatcagcactgaatatc
cagaactaccatctagagtgtaatgagatcaagagctggatgaaggagaagacaaaggtc
attgagtccacgcagagccttggaaatgacctggctggagtcatggccctccagcgtaaa
ctcactggtatggaaagagacctggaggctatacagggtaagttggatgacctgcgttgt
gaggcagagaaattggcgtctgagcaccctgagcaggaggaggagatcaagggtcgactg
gctgaaatccaggaggtgtgggaggagcttcgagccaccatgaaacggcgcgaggagtcg
ttgggcgaagcctctaagcttcagggcttccttagagatcttgatgacttccaggcctgg
ttgtcccgtacacagaccactgtggcatccgaggacacacctacatctctagcggaagca
gagcgtctgctggctcaacatgaggccatcaagaatgaagtagataactacagggacgat
tatgagaagatgagagccactggagttgaggtgactcagggacagacggatgcccagcac
atgttcctagcacagcgactgcaagcgttggacaccggctggcatgagctgaggagaatg
tgggagagccgccactgtgtcctcgctcaggcctttgatttccaaatcttgctacgagat
gcaaaccaggcagagggcttcctcagtagccaggagtatgttctgtcacacacagagatg
ccctccagcctgcaaggggctgtggaggccatcaagaaacacgaggacttcctcaccaca
atggaggccagtgaagaaaagatcaatggcgtggtcgaatctggacgaagactcatatct
gatggcaacacctatgcagacaagattcaggagaagacagactccattcaggaaaggcac
cagaagaacaaacaagctgccaatgagctgctgggtaaactgaaggataacagagagctg
cagcacttcctacaggacggacaagagctgactttgtggataaatgagaaaatgttgaca
gctcaggacatgtcctatgatgaggctagaaaccttcacagcaagtggcagaagcaccag
gccttcatggcagagctagcctccaataaagactggctggacaagattgacaaggagggt
caggtgttggtaaaggagaagcctgagctggagcagacggtatcagagactatgagcagc
ctgcagaagcaatgggacgagctagagagcaccactcaagccaaggctcagtgtctgttt
gacgctaaccgagctgaacttttcacacagagctgctccgcgctggactcatggctccag
aacatctcctctcaactccaaagtgatgacttcggaaaagatctcaccagtgtcaacatc
ctgctcaagaaacatcagatgctggagaatcagatggaggtgcgtgagaaagaggtccag
tctctgcagtcacaggctctggccttggcccaagaggattctgggataatggaggtggat
gggcagcagagaagggtgacagacagcttctctaaactgcaggaccctttaagacagaga
aggcagtgtcttcttgcttcaaaggaggctcatcagttcaacagagaccttgaggatgaa
attttatgggtgaaggaaaggatgcctctcaccacatccacagaccacggtaaagatctg
cccagtgtccagctgctcatcaaaaaaaatcagactctgcaaaaggagattcagggccat
cagccccgtatcgatgacatccaggctcacggtaggaccatgtcccctgggaaggagtca
gagatggacagtgagagaagagctgctctggatgagcgtctggcggagctgagggaattg
tgggcccttttgatttctgagacggaaaagaggaacatgagactagaagaggctaaccga
gcgcagcagttttacacagatgctgcagaggctgaggcctggatgggagaacaagagctt
catatgatgtcagaggaaaaggcgaaggatgagcagagtgctttggtgatggtgaagaaa
caccaaattctggagcaggctctagaggactacgctcaaaccatccatcagctggccaat
agcagcagacttatggtgaatagtgaacacccagagagtgaaagaattactctgaggcag
gcccaggtggataaactgtacgcagggttgaaggatctggcggaagagaggagggccaaa
ctgcaggagagactgagactgacccagctgaagagagaggtggatgatttagagcagtgg
atcgccgaaagagaggttgtcgctgggtctcacgaactcggacaagactacgaacatgtg
acaatgttgcgtgacaagtttcgggagtttgcgcgggacaccagcacgattggtcaggag
cgtgtggatggagtgaacgcccaggcagatgatcttattgagtcaggtcatccggaaaac
gccagtgtggctgagtggaaggatgggctcaatgaggcctgggccgacctgctggagctc
atcgacacacgcacacagatgcttgccgcctcatatgagttgcaccgcttccaccaagac
gcccaggaagctctggggctcataaaggagaaaaaggagacgctagcaggggccgaactt
ggacgggacttgaacactgtccagcactttcttaggcagcatacggcgtatgagcatgat
gtgcaggcactcagtgggcaggtcacacaggttcaggacgatgctgcacgtctgcagaaa
gcgtacgctggagagaaagctgatgacatccttcgccacgagcgtgcagtcactgaagcc
tgggaggggcttcaatctgccactcaagccagacggctgctcctactggacacagtggag
aagttcagattcttaaacatggtcagagacctcatgctgtggatggaaggaatcaacttg
cagatccagtcacacgacagcccaagggatgtctcctcagctggtctggtcatcgccaac
catcaggatattaagtctgagatagagactagagcagacagctttagtgcatgcagtgaa
atgggacgcaccctcaccaacaacgaccactatgcttcagatgagattcaagagaaattg
gatcagcttcaggccaaacgcactgaaattaatcagaagtggcaagagaaaatggaccac
ttacagatcgttctggaggtgttacagttcggcagggatgcgtctatggctgagtcgtgg
ctggctggacaggagccactggtcagggcagcagaattgggctctaacgtagacgaggtt
gagagtcttatcaaacgccacgaagcctttgaaaaactggcagcaggctgggaagatcgt
ttcacacagctagagaaactcaccacgctggaggaacaggaaattcaaagaaaaagggaa
gaggaagagagggcccgacgacctcccacacctccccctgtggaggaggtagtacagtct
gagatcaacgattctgctgcaaggacgagtctggaccagactacactgaaccagtcagta
tctgtcaatggtgcctacagtgaccaggacacatcacagtcgttattggtctctgtatct
gaactccagaaacctgaacctaaacaagagagtaaacttcagtcttacccagtttctaaa
cctgtgcctaaaccccacaaggcacaggagcgtggatcagaatctgaatctgttaatggt
ccgggccgtgacagcggtctggactcagcatcacgccaggacccttcagcaacactgcca
gggcgaggaggagcagagcccaccacagacgccatggagggcatcctctgcagaaaacag
gaaatggaatcgcacaacaaaaaagcagccaccagatcgtggcagaatgtatattgtgtt
ttacgtaaaggcagtctgggattctataaggacaacaagagtgccgcgaatggagtccca
taccacggagaagttcccatcagcctcagcgatgctgtctgtgaggtcgcccatgactac
aagaagagaaaacatgtatttaaacttaggcttggcgatggaaaagagttcttgtttcaa
ggaaaggatgaggctgagatgagttcatggatacaagcaatccaatcaaccctgtcgtcc
accgagcgttcgccgggtgccacacgaggtctgattcgggcgatgaccatgccacccata
tctcccagctcgggcgatgcaggaggcgtgaccatgcgcaacaaagacggcaaagagaga
gaccgcgagaagcgtttcagtttctttggcaagaagaaatga
DBGET
integrated database retrieval system
