Carassius gibelio (silver crucian carp): 128013400
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Entry
128013400 CDS
T08819
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
cgib04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128013400
04020 Calcium signaling pathway
128013400
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128013400
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
128013400
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128013400
Protein kinases [BR:
cgib01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
128013400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR-1-like_Ig-like
ig
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
Izumo-Ig
C2-set_2
C2-set
C1-set
Ig_5
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
128013400
NCBI-ProteinID:
XP_052452319
LinkDB
All DBs
Position
B24:10036381..10069714
Genome browser
AA seq
1291 aa
AA seq
DB search
MFDILFVMIFGLSGRVLTKDTDTKGRFSSPVLDVTEKQLIIERNQTLQLNCRGRWELHWV
LPSGVPKVYHGTQIEKTVCGKKNNQYCSRLTLSPALAQHTGSYRCRYLQKQRKQASVYVY
IRDSQQPFVKMHSEIPDVVYMKEGEPLVFPCRVTNPDAKVLLVKESVSAFNIHRLAPDHR
NIIWNSRQGFTIRTPTFFYIGLFSCETVVNGVKYSNKFLTHRPVNEILDVYLNSTGLVHT
LQGQMLALNCTVTAAWNTRVSISWTYPQKANGSANIIRRISRSQTNMLFYSLLTIPRLSK
ADRGLYKCHVTSGPSKRETNTTVIVYDQPFIRLKHRDGPVVQASAGQKSFRLTPKLRAFP
APEVIWLKDGMIAAERCSRYHVDGFSLVIRDVAEEDAGIYTILTGIQQYGLYQNLTLTLV
VNVKPQIGEKTVSSQQAGTVQRGSRQALHCTSHGVPPPQIQWLWHPCPPKGLCEKPPPSS
WTAVSEKTEVTSTHNPILTVSYRQEVLEGKNKTVGVLTVGEALISGIYRCVASNLMGRDE
LDISFYVTDVKGGLIVSLEEEPREGGDLHLVCIANRHLYSDLSWYRFTNQSTTSEGASDL
GGELKEGQFSHTLELLLKNVTAQDSGTYRCSATHLLTGEHTHLDTTVEVTVLQAPVLLRN
LSDHSVNVSKSVTLRCPSRGIPHPRITWYKDQRKLQQVSGIMLFPEEGTLHIDRITVEDQ
GLYTCKATNERGSVESSAHIWVQSSSESLSLEIPTLACTCVVATLFWLLLTLLIRKLKQP
NSTNGKAEYLPIILHPGDEHLVENCDRLQYDPAQWEFPRDRLQLEKPLGRGAFGRVMQAS
AFGICSSASCTTVAVKMLKDGATPSEHKALMTELKILNHIGHHLNVVNLLGACTKPGGPL
MIIVEYCKFGNLSAYLKSKREVFLLNRVSREEEGGMKEGYKARLTSVSSSQSNASSGFSE
EKGEISEEDSGSLPESNSPLLLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSNNN
VVKICDFGLARDVYKDPDYVRKGDARLPLKWMAPESIFDKVFTAQSDVWSYGVLLWEIFS
LGASPYPGLNIDEAFCHRLKQGTRMCPPEYSTPEIYSIMMACWENNPEDRPSFSALVEIL
GDLLQTCVQQDGKDYIPLNAFISGEGNTVTPHIVQKDISQKSLGTSSYSSSGKIKAISTF
EDLHKEIPDDNQSDSGMVLPSEELIRVKWTDRFKTQNITKFFSKGENQHMKLPCMNSAPC
CHQREVPPVCSSERCCSPPPDYEAALLYPCF
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatattatttgtgatgatatttggattgtcagggcgtgttctgacaaaagat
acagacacaaaagggaggttcagttctccagtgttggatgttactgaaaagcagcttatt
atagagagaaatcagacacttcagctaaactgcaggggtcggtgggagctccattgggtt
ttgccatcaggtgtcccgaaagtctaccacggcacccagatagaaaagactgtatgcggg
aagaaaaataaccagtactgcagccgcttgacgctcagtcctgctttagctcaacacact
ggctcttaccgctgcaggtacctccaaaagcagcgcaaacaggcctctgtgtacgtctac
atcagagatagccagcagccgtttgtaaagatgcactcggagatcccagatgtggtgtac
atgaaggagggagagccgttggtgttcccctgcagagtcacaaacccggatgccaaagtc
ttgttggtcaaggagagtgtctcagcttttaatatccaccggttagctcctgatcataga
aacatcatctggaacagcaggcaaggtttcactatccgtactcccacattcttctacatc
gggctattttcctgtgagactgtcgtcaatggagtcaaatatagcaacaagttcttgact
cacagaccagtgaatgagattctggatgtgtatttgaacagcacgggtttggtccacacg
ttacagggccagatgttagcactgaactgcaccgttacagctgcatggaacaccagggtt
tccatcagctggacgtacccacaaaaggctaatggatctgccaatatcatcagacgcata
tcaaggagccaaaccaacatgctcttctacagtcttctcaccatccctagactgagcaaa
gcagacagaggactttacaaatgccatgtaacaagtggtccatctaagcgagaaacaaat
accacagttattgtctatgaccagccgttcattcgactcaagcacagagatggccctgtg
gttcaggcttctgcaggacagaaatctttccgtcttactccaaaactgagggctttccct
gcacctgaagtcatctggttgaaggatgggatgatcgccgccgagcggtgctcccgttac
cacgtagatgggttttctctggtcattcgggatgttgcagaagaagatgctggaatctac
accatccttactggcatccagcagtatggactttatcagaacctcacactcacgttggtg
gtaaatgtgaagccacagattggagaaaagacagtttcctctcagcaagccgggactgtc
cagcgaggcagcagacaagcccttcactgcacctctcacggtgtcccaccacctcaaata
caatggctctggcatccatgtcctccgaaaggcctatgcgagaagcctcctccttcgtcc
tggactgcagtcagcgagaagacagaagtcacgtccacccacaatcccatcctgaccgtc
agctacagacaggaagtgttagaagggaagaataagactgtaggagttctgacagttggc
gaagcattgatatctggcatctatcgctgtgttgcatcaaacttaatgggcagagatgaa
ctagacatcagtttctatgtcacagatgtcaaaggaggcctaatcgtgtctttggaggaa
gagcccagagagggaggggacctccatctggtctgtatagccaataggcacctctattca
gacctgtcatggtatagatttacgaatcaatccaccacatcagagggagcttcagatctc
ggcggggagctcaaagaggggcagttctctcacactctggagcttctgctgaagaatgtg
actgcacaggattcgggaacataccgctgttcagccacacacctgcttacaggagaacat
acacacctagatacaaccgtggaggtcacagttctgcaggcaccggtgctgctgcgaaat
ctgagtgatcacagtgttaacgtaagcaaatcagtcactctccgctgcccctctcgggga
attccacacccccggatcacatggtataaggaccagagaaagctgcagcaggtgtctggt
attatgctgttcccagaggaagggactcttcatatcgaccgaattacagttgaagaccag
ggactttacacctgtaaggccaccaatgagagagggtctgtggagagctccgcccacatt
tgggttcaaagttcatctgaatcactttccctggagatcccgactctagcatgcacatgc
gtggtggccactctcttctggcttcttctcacactgctgattcgcaaactcaaacagccg
aactcaactaatggcaaagcagagtacctgccaatcatcctgcatccgggggatgaacat
ctggtggagaactgcgacagattacagtatgatcccgcccaatgggagtttccacgtgac
cgccttcaacttgaaaagcccctggggcgaggggcatttggccgagtaatgcaggcctca
gcttttggcatttgcagttcagccagctgcaccacagtggccgtcaaaatgcttaaagat
ggcgctacgcccagtgaacacaaggctctgatgacagaactgaagatcctcaatcatatt
ggtcatcacctcaatgtggtcaatcttcttggtgcatgtaccaaaccaggagggcctctg
atgatcatagttgaatactgcaagtttggcaacctgtctgcgtaccttaagagcaaacga
gaagtgttcctgttgaacagggtgagcagagaagaggagggaggcatgaaggagggatat
aaagcacgattaactagtgtgtccagcagccagagcaatgccagctcagggtttagtgag
gagaaaggagaaatctcagaggaggacagcggttctcttcctgaatccaacagccctctg
ctgcttgaagacctgatctcttacagctttcaggtggccagaggaatggagtttctcgcc
tctcgtaagtgcatccatcgtgaccttgctgccagaaacatcctgctgtccaacaacaac
gtggtgaagatctgtgattttggcttggcccgagacgtatacaaagacccagactatgtg
cgcaagggagatgcacggttaccactgaaatggatggcacctgaatcgatcttcgacaaa
gtcttcacggctcagagtgacgtgtggtcatatggagttctgctctgggagatcttctca
cttggagcgtctccatacccagggctgaacattgatgaggcgttttgtcacagactgaag
caggggactcggatgtgtcctcctgagtacagcaccccggagatttacagcattatgatg
gcatgctgggaaaataaccctgaggacagaccttctttctctgctcttgtggagatactg
ggagacctcctacagacctgcgtccaacaggatggaaaggattatattccactgaacgct
tttatttctggagaaggaaataccgtcacgccgcacatcgtccagaaagacataagccag
aaatcactgggaacttcaagctacagcagctctgggaaaatcaaagccatcagcactttt
gaggatctacacaaagaaatccctgatgacaaccagtctgacagtggaatggttctcccg
tctgaagagctgattcgggtgaagtggactgacagatttaaaacccaaaacatcactaag
ttcttctctaaaggtgaaaaccagcacatgaagctgccttgtatgaatagcgccccctgt
tgtcatcagagggaggttcctccggtgtgttcctcagagaggtgctgctctcccccgcca
gactatgaagctgctctcctctacccctgtttctaa
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