Carassius gibelio (silver crucian carp): 128013884
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Entry
128013884 CDS
T08819
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128013884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128013884
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
128013884
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128013884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
128013884
NCBI-ProteinID:
XP_052453025
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All DBs
Position
B25:12236571..12240474
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AA seq
404 aa
AA seq
DB search
MAVRPPVKMEERQYSSLTADMDYLQYWYQTNTQQYQAEQVPQYHQMLNAVQYTERPVEDK
IMTDLSVHQDPYPDQPQQHHQLSAQPPALPTTPAKGKKRGRPPKGEGKERTEAEESAKKA
KRTLDRFNGMSVEEVMAKKLPDIITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLF
LSGLTDEQLNHMHDQTLPERYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQMYRP
LIAVFNGKCIYETFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQD
KVHFFIKLKELRDQMKGVVKTQEIQETSYTFDLPLAKEDAKRQSIKEEQHDPGYEETCAH
GSQQHTPQAFGVHPSTDTDQVPDNRWTMQPFADQIPDIRCSNSN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagaccaccagttaagatggaagaaaggcagtattcatctctgacggccgat
atggattatcttcagtactggtatcaaaccaatactcagcagtaccaggcagagcaggtg
ccacagtaccaccagatgcttaatgccgtccaatacacagagagacctgtggaggacaaa
atcatgactgatctttcagtgcatcaagatccatatccggatcaacctcaacagcatcat
caactctctgctcaaccaccagcccttccgacgactccagcaaaaggaaagaaaagggga
aggcctccaaaaggtgaaggaaaggagaggactgaagctgaagagtctgccaagaaagca
aaaaggacgctagatcggttcaacgggatgtcagtggaggaagtcatggctaaaaagctg
ccagacatcatcacacataatcttgacatgctgattatcggcatcaatcctggactcttg
tcagcctacaagggaaggcattatccaaatcctgggaaccacttttggaaatgcctgttt
ctttctgggctgactgatgaacagctcaaccacatgcatgatcagacgcttcctgaacgc
tatggcattggtttcacaaatatggtggagaggacaacacctgggagtaaagacctatca
aacaaagagatccgtgaaggtggccaccagcttctggaaaagctccagatgtacagacct
ttaatcgctgtgttcaatggaaaatgtatttacgaaacattttgcaaggagattttcgga
gtaaaggcaaagaacttagagttcggattgcagccttacaaagtgccggaaactgagacg
gtttgctatctgatgccatcatcaagcccacgctgtgcccagtttcctcgtgctcaggac
aaagtgcacttcttcatcaagttaaaggagctcagggatcagatgaagggagtggtgaag
actcaagagatccaagagacaagctacacatttgatctgcctctggccaaagaggatgcc
aaaagacagtcaatcaaagaagagcagcatgaccctggatatgaggagacttgtgcccat
ggatcacagcagcacacaccgcaagcatttggggtccatccttcgacagacacagaccag
gtaccggacaaccgttggacaatgcagccgtttgcagaccagattccagacatcagatgt
agcaacagcaactga
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