Carassius gibelio (silver crucian carp): 128014340
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Entry
128014340 CDS
T08819
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128014340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
128014340
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128014340
Intermediate filaments
Intermediate filament-binding proteins
128014340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
Y_Y_Y
DUF5060
Big_1
CH_2
Motif
Other DBs
NCBI-GeneID:
128014340
NCBI-ProteinID:
XP_052453791
LinkDB
All DBs
Position
B25:complement(22107422..22128933)
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AA seq
2717 aa
AA seq
DB search
MSNYTHLEDLPPQYYQGTDFGEEEEEEMPSTEKELAEDAPWKKIQQNTFTRWCNEHLKCV
NKTLTDLQRDLSDGLKLISLLEVLSQKKMYRKHHVRPNFRQMKLENVSVALEFLDRERIK
LVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDDEDDEEVKKLTPKQRLLGWIQNKV
PELPINNFNKDWRDGKALGALVDNCAPGLCPDWQAWDPNKPVANAREAMQQADDWLGVPQ
VIAPEEIVDPDVDEHSVMTYLSQFPKAKLKPGAPLKPKQLCPKKAKAYGPGIEPQGNMVL
KPAVFTVETLEAGLGEVIVYVEDPEGHTEEAKVVPNNDKKRTFSVTYVPKVEGPHKVKVL
FAGQDIDKSPFMVNVGKALGDPKKVQARGPGLEPVGNVAHKPTYFDIYTAGAGAGDVSVV
IVDPQNKNNTVEVLLENKGDNIFRCTYKPVQEGPHTIHVSFAGQPIPNSPFKVHVSEALP
KPSSGAPKQVLALTKKASNANACRATGRGLQPKGVRVKEVADFTVFTKGAGTGELKVSVK
GPGGVEVPVKVQDVGDGVYKCDYCPVKPGKYNVNITWGGQLIPRSPFEVEVSKEAGPQKV
RAWGPGLKTGMVGKSADFVVEAIGTEVGSLGFSIEGPSQAKIECDDKGDGSCDVRYWPTE
AGDYAVHVICDDEDIKDSPFMAHILPAANDVFPEKVKAFGPGLEPTGVIVNKSTQFTVDA
RQAGKGSLKIYAQDAEGCVINIQITDKGDGTFVCTYVPTKPVKHTIIITWGEVNVPKSPF
RVLVGEGCYPDKVKVFGPGVEKTGLKANEPTYFTVDCSEAGQGDISIGIKCAPGVVGPAE
ADIDFDIIKNDNDTFTVKYTPPGPGRYTIMVLFADQEIPNSPFKVKVDPSHDAGKVRAEG
PGLNKTGVQVDIPTHFTIFTKGAGKAKPEVQFKTAAKGNAVKDFEIIDNHDYSYTVKYTA
LHQGEMAIMVTHGGDPIPKSPFKITVAPPLDLGKVKVQGLNEKVEVGKDQEFIVSTKGAG
GQGKVNVTITSPSGRTIPCKLESDKTKETTSVKYIPPEEGHYKVDISYDGNPVPGSPFAV
EGLMPADPSKVRAYGPGLKSGIVGQPARFTIDTNGAGAGGLGLTLEGPCEAKIECQDNGD
GTCSVVYLPTEAGDYNINILYGEAHIPGSPFKPVVKPALDAGKVIVSGPGLERAKAGEVA
TFTVDCSRAGEAELTIEIVSDSGAQAEVCIQNNNDGTFSVTYTPLFHGVHTITIKYGGQQ
VPKSPIRVQVEPSVDTSGIKVYGPGVEPRGVLKEVTTHFIVDARAQTKTKGGNHVKIRII
NPSGANTDAFITDKGDGTYRVEYTAFEDGLHLIEVFYDDVAVPKSPFKVSVVEGCDPTRV
RAYGPGLEGGLVNKPNCFTVETRGAGMGGLGLTIEGASEAKMFCKDNKDGSCSVEYMPFT
AGDYDININYGGQPIPGSPFRVKVKDVVDVSKVKCSGPGLANRVTAHVPQTFTVDSSKAG
VAPLEVQLYGPKGTLEPVVVKNNRDGTYTVNYTPAQEGPHTVSVKYANQEVPNSPFKVNS
APTHDASKVRASGPGLDTKGVAASLPVEFTIDARDAGKGLLTVQILDPEGKPKKASIQDN
RDGTYTVSYVPDMTGRYTITIKYGGDNIPYSPYNVQAFPTGDASKCLLTVSIGGHGVENL
GPNIKIAEETFITVDAKAAGKGKVTCTVLTPNGMELDMDVTENPDGTFDIYYTAPEPGKY
VITIRFGGQHIPKSPFQVMATDQPVVPRVDTKPMFQPLNLVIPFTVQQGELRGEVRMPSG
KTARPFIRDNKDGTVTVQFQPTERGLHEMDIKYDGNHIPGSPLQFYVDVMNSGMVTAYGP
GLCHGTVNKLATFTVVTKNAGQGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTSPGDYN
IIVKFDNSHIPGSPFTAKITGDDSLRRSQMNVGTAADVSLKITETDLSYLTASIKAPSGQ
EEPCLLKRLPNRHIGLSFTPKEVGEHEVSVRKSGKHVNNSPFKIMVGPSEIGEASRVKAF
GKGLVEAHTFEVAEFFVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVTYCPTEPGN
YIINIKFADKHIPGSPFTVKVTGEGRMKESITRKRQAASVASVGSACDLNLKIPGNWFQM
LSAQERLTRTFTRSSHTYTRTERTEISKSHGGETKREVHVEESTQVGGDPFRDVFESFLG
RERLGSFGAVRQEADTEIQGMTAQVTSPGGNVADAEVVDSGNSTYRVRFVPAEMGPHTVN
VKYRGEHVPGSPFQFTVGPLGEGGSHKVRAGGTGLERAVAKVPAEFSIWTREAGAGGLSI
AVEGPSKAEISFEDRKDGSCGVIYIVQEPGDYEVSIKFNNEHIPDSPFIVPVATLSDDAG
RLTVTSLQEKDLKINQEASFAVQRNGARGVIDAKVHAPSGVIEECYVTELDSDKNVICFI
PRENGVHSIDVKFNGSHIPGSPFKVRVGEAESAGDPGMVTAFGSGLEGGRTGVPSEFIVN
TCKAGSGALSVTIDGPSKVKMDCTECLEGYKVSYTPMAPGNYLICIKYGGPQHIVGSPFK
AKVTGMRLSGGHSLHETSSVTVETVTKTSKMAGAFSSLSSSKSTSDASKVVCHGAGLSKA
FVGQKNTFSVDCSTAGTNMLMVGVHGPRTPCEDVAVKHMGNKLYNVTYTVKEKGNYVVIV
KWGDETVPGSPFQVSVP
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacacacatttagaggatctgccgccgcaatactaccagggcacagacttc
ggggaagaggaagaggaggagatgccctcgacagagaaagagctggccgaggacgcgccg
tggaagaagatccagcagaacaccttcaccagatggtgcaatgaacatctcaaatgcgtc
aataagaccctcactgacctccagagagacctgagcgatgggctcaagctcatctcgctc
ctggaagtcctcagtcagaagaaaatgtacagaaagcatcatgtcagaccaaacttcaga
cagatgaagctggagaacgtgtcggtggcgctggagtttctggaccgggagcggatcaaa
ctcgtgtccatagacagcaaagccattgtagatgggaacctgaagctgattctgggactc
atctggacactcattctccattactccatctccatgcccatgtgggatgatgaggatgat
gaagaggttaagaaactgactcccaaacaaaggctgctgggctggattcagaacaaggtc
ccagagctgcctattaacaactttaacaaggactggagggatggcaaggccctcggtgcc
ctcgtggacaactgtgcccctggtctgtgccctgactggcaagcatgggaccccaataag
ccggttgcaaacgctcgtgaggccatgcagcaggccgatgactggctcggcgtgcctcag
gtgatagctccagaggaaattgttgatccagatgtggatgagcattcagtgatgacgtac
ctctcccagtttcccaaagctaaactaaagcctggagctcctctcaagccaaagcagctg
tgccccaaaaaggccaaggcctatggaccaggtattgagcctcaggggaacatggttttg
aagccagctgtttttactgtggaaacactggaggcagggcttggagaagtgatcgtgtat
gtggaggacccagagggtcacactgaggaggctaaagttgtccccaacaatgacaagaaa
agaacattctctgtcacctatgtgcccaaagttgagggaccccacaaggtgaaagtactc
ttcgctgggcaggacattgataagagccccttcatggtgaatgtgggaaaggctctgggt
gatcccaaaaaagttcaggctcgaggtccgggtctggagccagtgggcaatgtggcccat
aagccaacgtattttgacatctacaccgcaggtgctggagctggagatgtcagtgtggtc
atcgttgaccctcagaataaaaacaacactgtggaagttcttctggaaaacaagggtgat
aacatcttcagatgcacctacaaacctgtacaagaaggaccgcacaccatccatgtgagc
tttgctgggcagccaatacccaacagcccctttaaagtgcacgtctctgaggcactccct
aaaccttcttctggggctccgaagcaggtactcgctcttacaaagaaagccagcaatgca
aatgcctgccgtgccactggaagaggactgcagcctaagggtgttcgggtaaaagaggtg
gcagatttcactgtttttaccaaaggagcaggaactggagagctgaaggtctctgtcaaa
gggcctggaggagtagaggtgcctgtgaaagtacaagatgttggtgatggagtgtacaag
tgtgattattgtcctgttaagcctggaaaatataatgtgaacatcacatggggaggtcaa
cttattccacgcagcccatttgaagtggaggtcagcaaggaagctggaccacagaaggtg
cgggcgtggggtcctggcttgaagactggaatggttggcaagtcagctgactttgttgtt
gaggctattggtacagaagtaggatctctagggttttctattgagggcccctctcaagca
aagatagagtgtgatgataaaggtgacggttcctgtgatgtgcgttactggcccactgaa
gctggagattatgcagttcatgtcatctgtgatgatgaagatatcaaagacagccccttc
atggcccatatacttccagcagctaatgatgtctttcctgagaaggtgaaagcattcggg
ccaggcctggagcccactggagttattgtcaacaaatcaacacagttcactgttgacgct
cgacaagctggcaaaggcagtctgaagatctatgctcaggatgctgaaggctgtgtgatt
aacattcagattactgataagggagatggcacttttgtttgtacgtatgttcctaccaaa
ccagtgaagcacaccatcataataacctggggggaggtcaatgtacccaagagtcccttc
agagtccttgttggtgaaggctgttatcctgacaaagtgaaggtctttgggcctggagtt
gagaaaactggcctaaaggcgaatgagcccacatacttcactgttgactgcagcgaagcc
ggccaaggtgatatcagcattgggatcaaatgtgccccaggtgtagtgggtccagcagag
gcagatatcgattttgacatcattaaaaatgataatgacaccttcactgtcaagtacaca
ccccctggccctggccgttacaccatcatggtgctctttgcagatcaggaaatccccaat
agccctttcaaagtcaaggtggatccttctcacgatgctggtaaagtcagagctgaaggt
cctggactgaacaagacaggcgttcaagttgatattccaacccatttcaccatcttcacg
aagggagcagggaaggccaaaccagaggtgcagttcaaaactgctgccaaaggaaatgct
gttaaagattttgagatcattgataatcacgactactcctacaccgtaaagtacactgcc
cttcatcagggtgagatggctataatggtcacacatggcggagatcccattcctaaaagc
ccttttaaaatcacagtcgcccctccacttgatcttggcaaagtcaaagttcaaggcctt
aatgaaaaagtggaagttggaaaggaccaggagtttattgttagcacgaaaggggcaggt
ggacagggtaaggtaaatgtgaccataacctcaccctctggtcgaacaataccttgtaag
ttggaatcagacaagaccaaagagaccaccagtgtgaaatacatcccacccgaagagggt
cattacaaggtggacatcagctatgatgggaaccccgttcctggaagtcccttcgctgta
gagggactcatgcctgctgatccctcaaaggttcgtgcctatggaccaggacttaagagt
ggtattgtgggtcagcctgcacggtttactattgacacaaatggagcaggtgctggtggt
ctgggtctaactctggaaggcccttgtgaggctaagattgagtgccaagacaacggtgat
ggtacctgctctgttgtctacttgccaacagaggctggtgactacaacatcaacatcctg
tatggggaagctcatatccctggctctccttttaaacctgttgtcaagccagctctggat
gctggtaaagtcattgtgagtggacccggactggaacgggctaaagctggtgaggtggcc
actttcacagtggactgcagtagagctggggaggctgaactcaccattgagattgtgtca
gattcaggggctcaagctgaagtttgtattcaaaataacaatgatggaactttttccgtc
acatacacccctctctttcatggtgtacacaccatcaccattaaatatggaggtcagcag
gtgcccaagagccccatacgtgttcaggtggagccatctgtggacacaagtgggattaaa
gtgtacggaccaggagtcgagcccagaggggtccttaaggaggtgaccacacacttcatt
gtggatgcccgagcccagactaagaccaaaggaggaaatcatgttaagattcgcatcatc
aatccatcaggcgcaaacacagatgcatttatcactgataagggtgacggcacatacaga
gtggaatacactgcttttgaggatggtttgcacctgatcgaggtcttttatgatgatgtt
gctgttcccaagagcccctttaaggtgtcagtcgtagaaggttgtgacccaacacgtgtt
cgagcttatggtccaggcctggaaggtgggctagttaacaaacccaactgcttcacagtg
gagacaaggggcgctgggatgggtggtttgggcttgaccattgaaggagcatcagaagcc
aaaatgttctgtaaggacaacaaagatggtagttgcagtgttgaatacatgcctttcact
gctggagactatgatattaatatcaattatggaggccaacctattccaggcagtccattc
cgggtgaaggttaaggatgtggtggatgtcagtaaggtgaagtgctcaggtcctggactc
gctaacagagtcaccgcacatgtcccacaaaccttcactgtggacagcagcaaagcagga
gtggctcctctagaggtgcagttgtacggtccaaaaggaactctggagcctgtagttgtt
aaaaacaaccgggatggaacatatactgtcaattacacccctgcacaggaggggccacac
actgtgtccgtcaaatacgccaaccaagaggtacctaacagtccattcaaagtcaattca
gcccccacacatgatgccagtaaggtgcgtgctagcggacccggtctggacactaaagga
gtggctgccagtcttccggtggagtttaccattgatgctcgtgatgcaggaaaaggcctt
ctgacagttcaaatccttgatccagagggaaagcccaaaaaagccagcattcaagacaac
agagatggaacctacactgtatcatatgtgccagacatgactggccgctacaccataacc
attaagtatggtggagataacatcccatactcaccttacaatgtccaagcctttcccact
ggcgatgccagcaagtgtctgctcacagtgtctattggaggacatggtgttgaaaacctt
gggcccaatattaagatcgcagaagagacattcatcactgtggatgccaaagctgctgga
aaagggaaggtgacatgtacggttctgacccctaatggcatggagctggatatggatgtt
acagaaaatccagatggcaccttcgacatatattatactgcacccgagccaggaaaatat
gtcatcacaatccgctttggagggcaacatattcctaaaagcccttttcaagtcatggcc
accgatcagcctgttgtaccgagagtggacacaaagcccatgtttcagccgctgaactta
gttatcccattcactgtgcagcaaggagagctcagaggggaagtgcgtatgccttctggt
aagacagctcgtcctttcatcagggacaacaaagatggaacagtcactgtgcaatttcag
cctacagagagaggcctgcatgaaatggatataaagtatgatggcaaccacatcccagga
agtcctttgcagttctatgtagatgtaatgaacagtggaatggtcacagcctatggacct
ggtctgtgccatgggacagtcaataaactagccacttttactgttgttaccaagaatgct
gggcaaggtggtttgtcccttgctgtagagggtccatctaaagcagaaatcagttgtaag
gacaataaagatggcacgtgcactgtgtcctacttgcccacttcacctggcgattacaac
atcattgtcaagtttgataacagtcatattcctggcagccccttcacagcaaagatcact
ggtgacgattcactccgaagatcgcagatgaacgttggcacagcagcagatgtctctcta
aagatcacagaaacagacctgagctatctgacagctagtattaaagctccatcaggacag
gaggaaccgtgcctgctgaagagattacccaaccggcacattggtctctcgttcaccccg
aaggaggtgggggagcatgaggtcagtgtgaggaagagtgggaaacacgtgaacaacagc
ccttttaagattatggtagggccatctgaaattggagaggccagcagggtcaaggctttt
ggtaaaggtctcgttgaagcacatacctttgaagtggctgagttctttgtggacactaga
aatgctggatatggaggacttggattgtcaattgagggtccaagtaaagtggatatcaat
tgtgaggatatggaagatggaacatgtaaagtgacgtattgccccactgaaccaggcaac
tacatcatcaacatcaagtttgcagacaaacacataccaggaagcccatttacagtgaag
gtaacaggagaaggaaggatgaaggagagtataacaagaaaacggcaagctgcctctgtt
gcctcagtaggcagtgcatgtgacctaaacctcaaaatcccaggaaactggtttcagatg
ttgtcagcacaggagcgcttaactcgtaccttcacacgcagtagccacacttacacacgt
acagaacgcacagagatcagcaagagccacggaggagagactaagcgggaggtacatgta
gaagagagtacacaggttggcggtgaccctttcagagatgtttttgagtccttcctggga
agagaacgactgggtagctttggtgcagtaaggcaagaagctgacacagagattcaggga
atgacagcccaggtgaccagccctggtggaaatgtagccgatgcagaggttgttgatagc
gggaacagtacttacagagtccgcttcgtacctgctgaaatgggtcctcacaccgtcaac
gtcaaatacaggggtgagcatgtccctggaagccccttccagttcacggttgggcccctt
ggggaaggaggctctcacaaggtccgggctggaggcacaggcctagagagagctgtcgca
aaagttcctgctgaatttagcatttggacgagagaggctggagcaggcggtctgtcgatt
gctgttgagggtccaagtaaggctgaaatctcctttgaagacagaaaagatgggtcctgt
ggtgttatttacattgtgcaggagccaggtgactatgaagtttccatcaagttcaataat
gagcacatcccagatagccccttcattgttcctgttgctacactgtctgatgatgcaggt
cgactcactgttacaagtcttcaggagaaggatttgaagattaatcaggaagcctcattt
gcggttcagaggaatggggcgagaggtgtcatagatgcaaaagttcacgccccctctggt
gtaatagaggagtgttatgtgactgaactggatagcgacaagaatgtaatttgcttcatt
ccacgtgagaatggtgttcattccattgatgtgaagttcaatggaagccatataccagga
agcccattcaaagtacgtgtcggagaagcagaaagtgctggggatccaggaatggtgact
gccttcggttcaggacttgaaggtggacgcacaggggtcccatccgagtttatcgtaaac
acatgcaaggctggttcaggtgccttatctgttactattgatggtccctcaaaggtcaaa
atggactgcactgagtgtctagaaggttacaaagtctcttatacaccaatggcaccagga
aactaccttatatgcatcaaatatggtgggccacagcatatcgttggcagtccattcaaa
gcaaaggttacaggtatgcgtctgtctggaggccacagtctacatgaaacgtcatcagtc
actgtggagacggtcaccaaaacctcaaagatggcgggagctttcagctctctgtccagc
tccaagtcaacttcagatgccagtaaggttgtatgccatggtgctggcctctccaaagcc
tttgtgggtcagaagaacactttttccgttgactgtagtacagcaggaacaaacatgcta
atggttggcgtccatggtcccagaactccatgtgaagatgtggctgttaaacatatggga
aacaagctttacaatgtaacctacacagtgaaggagaaaggaaactatgttgttattgtc
aaatggggggatgaaactgtaccaggaagtcccttccaagtgagtgttccctaa
DBGET
integrated database retrieval system