Carassius gibelio (silver crucian carp): 128014856
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Entry
128014856 CDS
T08819
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04137
Mitophagy - animal
cgib04141
Protein processing in endoplasmic reticulum
cgib04210
Apoptosis
cgib04217
Necroptosis
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04920
Adipocytokine signaling pathway
cgib05132
Salmonella infection
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128014856
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128014856
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128014856
09143 Cell growth and death
04210 Apoptosis
128014856
04217 Necroptosis
128014856
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128014856
04622 RIG-I-like receptor signaling pathway
128014856
09152 Endocrine system
04920 Adipocytokine signaling pathway
128014856
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128014856
09171 Infectious disease: bacterial
05132 Salmonella infection
128014856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128014856
04121 Ubiquitin system [BR:
cgib04121
]
128014856
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128014856
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128014856
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128014856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_6
ATG16
zf-C3HC4_4
SlyX
Sina_ZnF
Tropomyosin
Dynamitin
Rootletin
Motif
Other DBs
NCBI-GeneID:
128014856
NCBI-ProteinID:
XP_052454499
LinkDB
All DBs
Position
A5:complement(37645725..37655026)
Genome browser
AA seq
577 aa
AA seq
DB search
MAAQEPSPPSSIENNKPGFPKKILAIKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR
TVGSGPQKCNACIKEDIFEEPTSILKPGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDISVEKEKIHDHERVCA
HEHLNLLLHYIMGMKVCLEGLQPQSLELAGHKAQELHQALRDLETRVSQLNGPPVQGVPS
SSSSSSSSSAPPTTLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQELEVKAGTFED
VVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEMEGRLRE
MSATTFDGVFIWRIADFTKKRQDAIAGRAPAMFSPAFYTSKYGYRMCLRIYLNGDGTGRG
THLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDVTSSSFQRPVSEMN
IASGCPLFCPLSKLEGKNSYIRDDTIFIKVIVDLTGL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaagaaccctcccccccgtcctccatagagaacaacaagcccgggttccca
aagaagattctggccatcaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgaggagaccgttccaagcgcagtgcggccatcgcttttgttcttactgcttcaaccgg
actgttggatcaggaccacagaaatgtaatgcctgtatcaaggaggacatcttcgaagag
cccacgtccatcctcaaaccaggctgcgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtttgctttaacgaaggctgctcctggaaaggcagtattaaagat
tatgagttgagccatgaagggaagtgtgagttcatgattctgccgtgtcccttgtgcaaa
gagctcattagactgaacgaacaggagcgtcataatgaacgcgagtgtcctgagagaacg
ctcaactgcaagtactgtaaagaaccatttcatttcaaaaacatcaaggcccatgatgag
atctgtcccaaatatcctatgatttgtgaaggatgtgcgaagaagaaaatccccagggaa
aagtatgttgaccacatcaagttctgcagcaagttcaggactccatgcagatatcatgtg
gttggctgcgacatttcagtggagaaggagaagatccacgatcacgagcgtgtctgtgct
cacgaacatctcaacctgctgttgcactacatcatgggcatgaaggtctgtctggagggt
ctgcagccccaaagcctggagctggccggtcacaaagcacaagagcttcaccaggcgctc
cgagacctagagaccagagtcagtcagctgaacggaccgcccgtgcagggggtcccctcc
tcttcatcctcatcctcgtcctcctctgcgcctccgaccacgctgcccacctccttcacc
cctctgcccagctcggtgggcgcagcgctggagctccagctgcacagcgagaagaccaag
gtggcagatctgggccgtcgctgccaggagctggaggtgaaggcggggacgtttgaagac
gtggtctgcgtgctaaaccgagaagtggagcgcttcgcaaccaccatggaggccagcaac
cgccaacacagactcgatcaggacaaaatcgaggctcttagtaacaaggtgcgtcagctg
gagcggcaggtgggtgttaaagacctgactgtggctgaaatggagggcagattgcgggag
atgtctgccaccacgtttgacggcgtcttcatctggcggatagcagatttcactaaaaag
agacaagatgccattgctggacgggcgcctgccatgttttcacccgcattttacacaagc
aagtacggctacaggatgtgcctgcggatttacctgaacggcgacgggacgggacgggga
acgcatctctcgctgttttttgtggtcatgagagggttgagtgatgcgctgctcaaatgg
cccttcaaccagaaggtcacactgatgctgctggaccagagtaacagagagcacatcatc
gatgctttccgtcccgatgtcacttcctcctcgttccagaggcctgtaagtgagatgaac
atcgccagcggctgcccgctcttctgtccactgtccaagctggagggcaagaactcatac
atacgtgacgacaccatcttcatcaaagtcatcgtggacctcactggcctttaa
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