KEGG   Carassius gibelio (silver crucian carp): 128016049
Entry
128016049         CDS       T08819                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128016049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128016049
   03041 Spliceosome [BR:cgib03041]
    128016049
   03032 DNA replication proteins [BR:cgib03032]
    128016049
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     128016049
Spliceosome [BR:cgib03041]
 Complex A
  U1 snRNP components
   Sm proteins
    128016049
  U2 snRNP components
    128016049
 Complex B
  U1 snRNP components
    128016049
  U4/U6.U5 tri-snRNP components
    128016049
 Complex C
  U2 snRNP components
    128016049
DNA replication proteins [BR:cgib03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     128016049
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 128016049
NCBI-ProteinID: XP_052456328
LinkDB
Position
A6:complement(30375105..30378814)
AA seq 237 aa
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
AQAPAGLAGPVRGVGGPSQQVMTPQGRGAVGAVAAGASIAGAPTQYPPGRGGPPPPMGRG
APPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPGMRPPPPGMRGPPPPGMRPPRP
NT seq 714 nt   +upstreamnt  +downstreamnt
atgacggtcggtaagagcagtaagatgttgcagcacatcgacttccggatgcgctgtatc
cttcaggacggacggatcttcatcggcacgttcaaagcgttcgacaaacacatgaacctg
atcctgtgcgactgtgacgagttcagaaagatcaagcctaagaactccaagcagccggag
cgagaggagaagagggttctgggtctggttctgctccgaggagagaatctggtttcgatg
acggtggaaggaccccctcctaaagacactggcatcgcccgtgtgccgctggcaggtgtg
gccggagggccaggagtgggccgagccgcaggccgaggcgtccccgctggagctccgatg
gctcaggctcctgcgggactcgcggggcccgtgaggggggtcgggggcccgtcacagcag
gtcatgacccctcaggggcgaggtgcggttggggccgtcgctgcgggggccagtatagct
ggagcccccacacagtatcctccgggccgcggtggacctcctcctccaatgggccgagga
gcacctcctccaggtatgatgggtcctcctccaggcatgcggccccccatgggacccccg
atggggatgccacccggccgcggcgctccgatgggaatgcctcctggcatgaggccgcca
ccgccaggaatgagaggtcctcctcctccaggcatgcgtcctcccagaccttaa

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