Carassius gibelio (silver crucian carp): 128017335
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Entry
128017335 CDS
T08819
Name
(RefSeq) NT-3 growth factor receptor-like isoform X1
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128017335
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
128017335
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128017335
Protein kinases [BR:
cgib01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
128017335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
ig
LRR_8
Ig_2
C2-set_2
LRR_4
LRR_5
Motif
Other DBs
NCBI-GeneID:
128017335
NCBI-ProteinID:
XP_052458645
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Position
A7:complement(33938443..34028845)
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AA seq
819 aa
AA seq
DB search
MDVWFCSAVPVLVWRLLFLSSIFQGYWSSMLDCPLTCSCSPIEIYCNKSDSGNFFPLLAL
QDPASNGSNNNDIEDLFRNITSIHIENWTGLQILKDVDMELYTGLQRLTIINCSLRTIQA
RAFVQNPHLRYINLSKNPLTTLSWQLFQHLQLVELRLEGVVFDCGCEIRWIQLWQLRGEA
GLHTQHLYCKNGASKIRLRSMSIAYCDLPDISVAHSNLTVLEGGNVTLSCNGSGSPVPEV
DWTVNGLLSINTHQSNVYWPNIHSINLTLVNVSRDDNGFVLTCISENVVGMTNVSLQLAV
LFPPVILKLDEPERRHHTCIEFTVRGFPHPTLRWFNKDREILQSEYIHMEMEHYKDYLEG
CLTFQNPTHYDNGNYTLVASNSLGSVTKTIYGYFLEPPFIEDEGMIDYTPTSEDEAKSPE
EDSFGMSIAVGLAGFGFVFLIVIFVLINKYSRRNKFGIKGPVAVISGEEDSASPLHHVNH
GIVTPCSLEAGPDAVVIGMSRIPVIENPQYFRHGHSCNKPTTYVQHIKRRDIVLKRELGE
GAFGKVFLAECYNLSPTKDKMLVAVKTLKDPTLTARKDFQREAELLTNLQHEHIVTFYGV
CVDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPMQPNGELGLSQMFHIATQIAAG
MVYLSSQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSSDYYRVGGYTMLPIRWMPPE
SIMYRKFSTESDVWSFGVIMWEIFTYGKQPWYQLSNNEVIECITQGRVLDRPRLCPKEVY
DLMLGCWQREPQQRLNIKDIQKVLYALGKATPVYLDILG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatggttctgttctgcggttccagtgttagtctggaggcttctctttctttca
agcatcttccagggttattggagctccatgctcgattgtccattaacatgcagctgttcg
cccattgagatctattgcaataagtccgacagtgggaatttcttccctttacttgctcta
caagatccggcgagcaatggcagtaacaataatgacattgaagatctcttcaggaacatc
acgtccatacacatagagaactggacaggattgcagattcttaaggatgttgacatggaa
ctgtacacaggactccagagactgactataataaattgcagtttacggacaatccaggca
cgtgcatttgtgcagaaccctcacctccgctacataaacctgtccaagaaccctctgacg
acactctcttggcagctttttcagcaccttcagctggtcgaactgaggctggagggggtc
gtctttgactgtggctgtgagatccgatggattcagctctggcagctgagaggtgaggct
ggcctgcacacccagcacctctactgcaagaatggcgcaagcaagatccgcctgagatca
atgagcatcgcctactgtgacctgccagatatcagcgttgctcacagtaacctgactgtg
ctggaggggggtaacgtgaccctcagctgtaatggctctgggtctccggtacctgaggtg
gactggaccgtgaacggccttctctccatcaacacacaccagtcaaatgtctactggccc
aacattcactccatcaacctgacgctggtcaacgtgagcagagacgacaacggatttgtt
ctgacctgcatctctgagaatgtggtcggaatgaccaatgtgtcccttcagctggctgtg
ctatttccaccagtaatactgaagctggacgagccggagcggcgccatcacacctgcatt
gagttcactgtgaggggctttccccatcccacactgcgctggttcaacaaggaccgtgag
attctgcagagcgagtacatccacatggagatggagcactacaaagattacttggaaggc
tgcttgacttttcagaaccccacacattacgacaatggaaactacaccctagtagcctcc
aactccctcgggtcagtcaccaaaaccatctacggctattttcttgagccaccgttcatt
gaggatgagggaatgattgattacactccaacatctgaagatgaggcgaagagtcctgaa
gaagattcatttggaatgtcgattgctgttggtctggctggctttggttttgtattcctc
attgtgattttcgtcctcatcaacaaatacagcaggcgcaacaaatttgggataaaaggc
ccagtggcagtcatcagtggggaggaagactctgcaagccctcttcatcacgtcaaccat
ggtatcgtcacaccctgctctctcgaggcgggaccggacgccgtcgtaatcggcatgagt
cgcattcctgtcatcgagaacccgcagtactttcgacatggacacagctgcaacaaacca
accacttatgtgcagcatattaaacggagggacattgttctgaagagggagctgggcgag
ggggcttttgggaaggtgtttctggccgaatgttacaacctcagccccaccaaagataag
atgctggtggctgtgaagactctcaaagatccgaccctgactgccaggaaagactttcaa
agggaggccgagctcctcaccaacctccagcacgagcacatcgtgacgttctacggcgtg
tgcgtggatggcgaccctctcatcatggtgtttgagtacatgaagcatggagacctcaat
aagtttctgagagcccatggtccagacgccatgatcctcgttgacggccaaccgatgcag
cctaatggggaacttggtctctcgcagatgtttcatatcgctacacagatagcggcaggc
atggtctacctgtcctcgcagcatttcgtgcaccgtgacctggccacccgcaactgcctc
gtgggtaacggcctgctcgtgaaaatcggcgacttcgggatgtccagagacatctacagc
tcagattactacagagtgggaggttacaccatgctgcccatacgctggatgcctccggag
agcatcatgtacaggaagttctccacagagagcgatgtatggagcttcggagtcattatg
tgggagatcttcacctatgggaaacagccatggtatcagttatctaataatgaggtcatt
gaatgcattactcaaggtcgggttctagacaggcctcgtctgtgtcctaaggaagtgtac
gacctcatgttaggctgctggcaaagagagccgcaacaacgactgaacatcaaagacatt
cagaaagttctttatgctctgggaaaagccacgcctgtctacttggacatcctcggctga
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