Carassius gibelio (silver crucian carp): 128018379
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Entry
128018379 CDS
T08819
Symbol
si:busm1-266f07.2
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain
KO
K06752
MHC class II antigen
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
cgib04514
Cell adhesion molecules
cgib04672
Intestinal immune network for IgA production
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128018379 (si:busm1-266f07.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128018379 (si:busm1-266f07.2)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128018379 (si:busm1-266f07.2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128018379 (si:busm1-266f07.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128018379 (si:busm1-266f07.2)
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128018379 (si:busm1-266f07.2)
Exosomal proteins of epithelial cells
128018379 (si:busm1-266f07.2)
Exosomal proteins of breast milk
128018379 (si:busm1-266f07.2)
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Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
C2-set_2
I-set
C2-set_3
ig
Motif
Other DBs
NCBI-GeneID:
128018379
NCBI-ProteinID:
XP_052459824
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All DBs
Position
A8:9673514..9675713
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AA seq
236 aa
AA seq
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MEMYGVLLLLAVIVSTETQVMHRDSQFLGCSDTEKEFMYGFDGEELYHSDFIRQEGVVTL
PDFADPIGFTGFYEAGVANIEVCKQNLAQDIKLSKPTVEQLAPPDASIYSKDDVVLGVEN
ALICHVTGLFPPPVNVSWTKNNQIVTEDVSLSQYRIKNDGTFNIFSSLKFTPAEGDIYSC
TVSHKALERRGITKTWDVDVAVPGVGPAVFCGVGLSLGLLGVAAGTFFLIKGNNCN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtatggtgtcctgcttctgctcgctgttattgtcagtactgagactcaagtt
atgcacagggacagtcagtttcttggatgttctgatacagagaaagagtttatgtatgga
tttgatggagaggaactgtaccattcagacttcattagacaagaaggagtagtgacactg
cctgactttgcagatcccatcggctttactggattttatgaggctggtgttgctaatata
gaggtgtgcaaacaaaacttagcccaagacattaagctttccaaacccacagttgagcaa
ctagcccccccagatgcctcaatctattcaaaagatgacgtggtgctgggtgttgagaac
gccctcatctgtcatgtgactggactcttccctccacctgtcaatgtatcctggactaaa
aacaatcagattgtgacagaggacgtgagtctaagccagtaccgcataaaaaatgatggc
accttcaacatcttctcctcgctgaagttcacacctgcagagggagacatttacagctgt
actgtgtcccacaaagctctggagagacgtggtataaccaaaacatgggatgtggatgtt
gctgtgcccggtgttggtccagctgtgttctgtggagtgggtctgtctctggggctgctg
ggagtcgctgctggaactttcttcctcattaaaggaaacaactgcaactga
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