KEGG   Carassius gibelio (silver crucian carp): 128018424
Entry
128018424         CDS       T08819                                 
Name
(RefSeq) lysine (K)-specific demethylase 2Ba isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    128018424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cgib03000]
    128018424
   04121 Ubiquitin system [BR:cgib04121]
    128018424
   03036 Chromosome and associated proteins [BR:cgib03036]
    128018424
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     128018424
Transcription factors [BR:cgib03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    128018424
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     128018424
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128018424
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     128018424
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box PHD Rubredoxin
Other DBs
NCBI-GeneID: 128018424
NCBI-ProteinID: XP_052459863
LinkDB
Position
A8:10882765..10897518
AA seq 868 aa
MAMSLSADDEDYDSDTAEQQRLPNKSKPKMAASTATTPAATTSSSTATAVKLPSNRSSSG
ARRRRTRCRKCEACVRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVC
GEAGKEDTLDDEDEKFNAMLMECSICNEIVHPNCLKVKDAAGVVNDELPNCWECPKCNYA
GKTGKACKQKRGPGFKYASNLPGSLLREQKAGRDGREELDQTSTGSSSIKRKSEREETPR
LKTEELPSRLPPLLSPSGLPRPRSEVPNFLRKKRKLFDDDEEEEEASVKKKPKKSWRPEE
ALIPKLSHMKTEEEEDNSDEEEERQEKRELPRRSIKKDYSTVRKEEVHEEERREERDPPF
RSLKEFNSLRKEEDQEDEKEEDDEDEEEDNNGKRGRDSSLALKNMSLESDASQCSSPRAG
PSSEGSETQEKAPRARAKRHRRKPPNRQLSTELSKQLNMEIRRTEHSLANENQQPLKSEP
EDSENEEPKRGLRNGTTGNGGGGGGVERGGGGEGGGERPHLRAREMNGTSWELRHFYPPQ
ITPLGLNRSSPTVRPIPARSPPKCVQMERHVIRPPPICPPPDRLPLADGRNHIAPREAWL
AIFGHLSHRELCVCMRVCRTWNRWCCDKRLWTRIDLKRCKSITPLMLSGIIRRQPITLDL
SWTNISKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDLQWVEGLKDPQM
RDLLSLPTDNRPGQMDTRSKLRNVIDLRLAGLDITDSSLRLIIKNMPLLSHLDLSYCNHI
NDQSVNLLTAAGTTTRDSLTDVNLSVCNRVTDQSLSYFKRCGSICHIDLRFCKQVSRQAC
ERFIAEMSVIVPFQLQEDKLLQKLHSTP
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggccatgtcactgagtgccgacgatgaggattacgactcggatacagccgaacagcag
cggctacccaacaaatccaagcccaaaatggctgcatcaacagcaacaacccctgcagca
accacttcttcatccactgcaacagcggtcaagctaccgtccaatcggtcctcctctgga
gctcgccgtagacgcactcgatgtcgaaaatgcgaggcatgtgtgcggacggaatgtggc
gagtgtcacttctgtaaggacatgaagaagtttggaggacctggtcgaatgaaacagtct
tgcattatgagacaatgtatagcgcccgtgttaccacatacagcagtttgtgtggtgtgc
ggtgaagccggtaaagaagacacacttgatgatgaagatgaaaaatttaatgccatgctc
atggagtgctccatctgcaacgagattgtccacccaaactgcctcaaggtgaaggatgca
gctggggtagtgaatgatgagcttcctaactgctgggagtgtccaaaatgcaattacgct
gggaaaactggaaaagcctgcaagcaaaaacggggcccaggctttaagtacgcatccaac
ctgccaggctccctgctgagggagcagaaagcaggacgtgacggaagagaggaattggac
cagacatccacaggttcttcatccattaaaaggaagagtgaaagggaggaaactcccaga
cttaagactgaagagctaccctcccgtcttcccccactcttgagccccagcggcctgcca
aggccacgatctgaagtgcccaacttcttgaggaagaagaggaagttatttgatgatgac
gaagaagaagaggaggctagtgttaaaaagaagccaaagaaatcctggaggcctgaagag
gctttgattcccaaactctctcacatgaaaacagaagaggaggaagacaactctgatgag
gaggaagagaggcaggagaagcgagaactgcctcgtcgttcaattaagaaagactacagc
acagtaagaaaagaggaggtgcatgaggaagagaggagggaggagagggatccacctttc
agatccctcaaggagttcaactccctacggaaagaggaagaccaagaagatgaaaaggag
gaagatgatgaggatgaggaggaggacaataatggcaaacgaggcagggatagtagcctt
gcactgaagaacatgtccttagagagtgatgcatcgcagtgcagctccccaagagcaggg
ccaagcagcgaaggtagtgagacgcaagagaaggcaccacgtgctcgggcgaagcgacac
cggcgcaagccccctaaccgccagctcagcacagaactaagcaagcagctgaacatggag
atccgtcgcacagagcattcactggccaatgagaaccagcagccactcaagagcgaacca
gaggacagcgaaaacgaagaaccaaagagaggtttacggaacggaactacagggaatgga
ggaggaggtggaggagtagaaagaggaggaggtggagagggaggaggcgagcgcccacac
ttacgagcaagagagatgaatgggacatcttgggagctgcgacacttctacccacctcag
attaccccgcttggtctgaatcgcagttcgcctacagtaagaccaattcctgcacgttca
cctcccaagtgtgttcaaatggagcgtcatgtgatccggccaccaccaatctgccctcca
cctgatagactaccactagctgatggccgaaatcacattgctcccagagaagcatggttg
gctattttcggtcacttgagtcatcgtgaactttgtgtgtgtatgcgagtgtgccgaaca
tggaatcgctggtgctgtgacaagagattatggactcgtatcgatttgaagcgttgtaag
tccatcaccccactgatgctaagtgggataattcgcagacagcccatcactctggacctg
agctggaccaatatctctaaaaagcaattaagctggcttattaaccgattaccagggctg
agggtacttcttctatcaggctgttcgtgggtggctgtttcagctctctgcacgtccagc
tgtcctctgttacgtactctagacctgcagtgggtggagggactcaaagacccccagatg
agggacctgctgtcccttcctactgacaatagaccaggtcagatggacacgcgcagcaaa
ctacggaatgttattgacctgcgtctggctggtttggacattacagacagctctctgcga
ctcatcattaaaaatatgcctctactctcccatctggacttgagctactgcaaccatatc
aatgaccagtcagtaaacctgctgactgctgcagggaccaccactagagactccttaact
gatgtcaacctttctgtgtgtaacagggtcactgatcagtcgctgagctacttcaaacgc
tgtggaagcatctgccacattgacctgcgattttgcaagcaggtgagccgacaggcatgt
gagcgcttcattgcagagatgtcagtcatcgttcctttccaactgcaagaggataaactg
ctccaaaaacttcacagcaccccctag

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