Carassius gibelio (silver crucian carp): 128019173
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Entry
128019173 CDS
T08819
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgib03037
]
128019173
Cilium and associated proteins [BR:
cgib03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
128019173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
TPR_IF140-IFT172
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
TPR_GEMI5
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR75_1st
ANAPC3
Beta-prop_NWD2_C
TPR_7
TPR_2
Beta-prop_SPT8
Beta-prop_IFT140_2nd
TPR_12
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
128019173
NCBI-ProteinID:
XP_052461202
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Position
A8:complement(2742167..2822485)
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AA seq
1187 aa
AA seq
DB search
MRAVATWIDKVHDRDKVEQCIYDLAFRPDGSQLIVAAGNRVLVYDTADGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSG
DFGLWSPEQKSVSKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKSGEEKVKIERPGG
SSSPIWSIAWNPSKDEHNDILAVADWGQRLSFYQLSGKQIGKDRQLNFDPCCVSFFSKGE
YIVMGGSDKQASLYTKDGVRLGTIGEQSSWVWTCRVKPDSNYVVLGCQDGTIAFFQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRSRLAIQLPEKILIYE
LHSDDSSDMHYRVKEKICKRFECNLLVVCSQHIILCQEKRLQCLSFTAVREKEWLMESLI
RYIKVIGGPSGREGLLVGLKNGAILKIFVDNPFAITLLKQNTSVRCLDMSTSRSKLAVVD
EHNTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYSMAAVEVPQSAPMYQYLERRMFREAYQIACLGVTDNDWRDLATEA
LEGLDFHTAKKAFIRVRDLRYLELINSIEERKKRGESNNQLFLADVYAYQGKFHEAAKLY
RKTGHDSRALSMYTDLRMFDYAKDFLGSADPKDTKLLMKKQADWAKNSKEPRAAADMYLT
AGEHMKAIEIIGEHGWMDMLIDLARKLDKAEREPLSRCAVFFKKFNHHGYAAEIYNKMGD
LKALVQLHVDARHWDEAFSLVEKHSQFRDDVYVPYAQWLAENDRFEEAQRAFHRAGRQAD
AVRVLEQLTHNAVVESRFNDASYYYWMLSMQCLDIARDNTEKKEEMLKKFHSFQHLAELY
HVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTRDAPLGISKVDTLYALAKQSKLLGAY
KVARHAFEKLQGLKIPSRYQDSMELSCLTVRSKPYRDSEDLIPMCYRCSTNNPLLNNQGN
SCINCRQPFIYSASSYEVLPLVEFYLEEDISDEEAVSLIDLEVPRVQTNSSWQEMSSGEA
QCLRVDDGIEDPEDDPFTAKLSFEQGGRAFVPVLVNRGVLRSMSRRDVLIKRWPRPLSWQ
YYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgtagccacatggatcgacaaagttcatgaccgagataaggttgaacagtgc
atctatgatctcgccttcagaccggacggatctcagctcatcgtcgcggctggaaaccga
gttctggtgtacgacaccgctgatggcacactgattcagccgctgaaaggacacaaagac
acggtgtattgtgtggcttacgctaaagatggcaaacgcttcgcatccggttcagcagat
aaaagcatcatcatctggacctccaaactggagggcatcctcaaatacactcacaatgat
tcaatccagtgtgtggcatacaaccccgtcacacaccagctggcctcgtgctcctcagga
gacttcggtctgtggtctccagagcagaagtctgtctccaaacataaagtcagcagtaag
atcacatgctgtgggtggactaatgacggtcagtacttggctctgggaatgatgaacgga
gtggtgagcatcagaaacaagagcggagaggagaaggtgaagattgagcgtccggggggc
tcctcatcacccatctggtccattgcctggaacccatcgaaggatgaacacaacgatatc
ttggccgtggctgattggggacagaggctgtctttctaccagctcagtgggaaacagatt
gggaaggaccggcagctgaactttgacccgtgctgcgttagcttcttctctaagggcgag
tacatcgtgatgggcggctcagacaagcaggcctcgctctacactaaagacggggttcgg
ctgggcaccatcggggaacagagctcctgggtttggacctgccgagtcaaaccagactcc
aactatgtggttttagggtgtcaggacgggaccatcgccttcttccagctgatcttcagc
acggttcatggcttatataaggaccgttatgcctacagagacagcatgacggacgtcatc
gtacaacacctcatcactgagcaaaaggtgcggataaagtgccgtgagttggtgaagaag
atcgccatctaccgcagcaggctggccatacagcttcctgagaagattctgatttatgag
ctgcactccgacgactcctccgacatgcattaccgcgtcaaagagaagatctgcaagcgc
tttgagtgcaacctgcttgtcgtctgctcacaacacatcattctgtgtcaggaaaagaga
ctgcagtgtttgtccttcacggccgtcagagagaaagagtggctgatggagtctctcatt
cgctacatcaaagtgattggtggcccgtctggacgagaggggcttctagtggggctgaaa
aatggagctatcctgaagatctttgtggacaacccgtttgccatcacgctgctgaagcag
aacacatcagtgcgctgtctggacatgagcacgtctcgcagcaagctcgcagtcgtggac
gaacacaacacctgcctcgtgtacgacattcacaccaaggagctgctcttccaggagccc
aatgccaacagtgtggcgtggaacacacagtgtgaggacatgctgtgtttctctggcagt
ggatatctgaacatcaaggccagtaacttcccagtgcaccagcagaaactgcagggcttt
gtggtgggttacaacgggtccaagatcttctgccttcacgtctactctatggcggcagtg
gaggtgcctcagtctgctccgatgtatcagtacctggagcgacgcatgtttcgggaggcc
tatcagatcgcctgtctgggtgtgaccgataatgactggagggatctggccaccgaggct
ctggagggactcgatttccacaccgccaagaaagcgttcatcagggttcgagatctgcgc
tatctggagctcattaacagcattgaagagaggaagaagaggggtgagagtaataaccag
ctcttcctggctgatgtttacgcctatcagggcaagttccacgaggctgccaaactctac
aggaaaactggccatgacagccgagctctcagcatgtacacagacctccgcatgtttgat
tacgctaaggatttcctgggctcagcagaccccaaggacactaagctgctgatgaagaag
caggcagactgggccaagaacagtaaagagcctcgagcggctgcggacatgtacctgact
gcaggagaacacatgaaagccatcgagatcatcggagaacacggctggatggacatgttg
atagacttggctcgtaaactggataaagcagagagggagccactgtccagatgtgccgtg
ttctttaagaagttcaatcatcacggttatgctgctgagatttataataaaatgggtgat
ctgaaggcgctggtgcagctgcatgtggacgctagacactgggatgaggcattctcttta
gtggagaaacactctcagttcagagacgacgtctatgtgccgtacgctcagtggctggct
gaaaacgaccgcttcgaggaggcccagagagccttccacagagccgggcgtcaggcggat
gctgtgcgggtgctggagcagcttacccataatgccgtggtggagagcaggtttaacgac
gcctcgtactactactggatgctgtccatgcagtgcctcgacatcgccagagataacaca
gagaagaaggaggagatgctgaagaagtttcacagtttccagcacttggctgagctgtat
cacgtctatcattctgtccatcgctacatgtcggagcccttcagctccaacatgccagag
atcctcttcaacatctcccgctttctgttccacaacctgaccagagacgctcctctgggc
atctccaaagtggacacgctgtacgctctggcgaagcagagtaaactcctgggagcgtat
aaagtggcacggcatgcctttgagaagctgcagggcctgaagatcccgtcccgctatcag
gacagcatggagctcagctgcctgacggtgcgctccaaaccctaccgtgacagcgaggac
ttgatccccatgtgttaccgctgctccaccaacaacccactgctgaataaccagggcaac
tcctgcatcaactgcagacagcccttcatatactcggcctcctcgtacgaggttctgccg
ctggtggagttctatctggaggaggatatctcagacgaggaggccgtgtctctcatcgac
ctggaagtgcctcgtgtgcagacgaacagcagctggcaggagatgagcagcggcgaagcc
cagtgtctgcgggtggatgatgggattgaagacccagaggacgaccccttcacagccaaa
ctcagctttgagcagggtggacgagcgttcgtgccggtgttggtgaatcgtggcgtgctg
aggtccatgtccagacgagatgttctgatcaagcgctggcccagacctctcagctggcag
tactaccgctctctgctgccagacgtcagcatcaccatgtgcccctcctgcttccagatg
tttcacagtgaggactacgagctgctggttcttcagcacaactgctgtccgtactgccgc
agacccatcgacgagcccagctag
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