Carassius gibelio (silver crucian carp): 128019475
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Entry
128019475 CDS
T08819
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2-like
KO
K08540
pregnane X receptor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128019475
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
128019475
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128019475
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
128019475
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128019475
NCBI-ProteinID:
XP_052461437
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Position
A9:4307117..4337233
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AA seq
425 aa
AA seq
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MCLLQLRMSIEMEELSPLDDSGHGDGSEDETEEDDEPKVCQVCGDKATGYHFNAMTCEGC
KGFFRRVMKRPAQLCCPFQNTCVITKTNRRQCQSCRLQKCLSIGMRRELIMSDEAVEKRR
MQIRRKKMQEEPVTLSPQQEAVIQELLTAHHKTFDMTCAHFIQFRPLDRDQKSKSRCTGE
PNSSRFTYTTTHEDAVQQTISFVSPSFPYFSIHSPETTEKTRHKSAIFTSLPHFTDLTTY
MIKNVINFGKTLTMFRALIIDDQISLLKGATFEIILIHFNMFFNEETGIWECGPLQYCLD
DAMRAGFQRHLLDPMMNFHYTLRKLHLREEEYVLMQAISLFSPDRPGVKHHSVIDRNQET
LALTLKTYIEAKRTEPEKHLLFPKIMACLTEMRSMNEEYTKQVLKIQDIQPEVSPLLLEI
ISKDS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttactccagctcaggatgagtatagaaatggaggagctttctcccctggacgac
tcgggacatggtgatgggtctgaggatgaaacagaggaggatgacgagcccaaagtctgt
caagtatgtggagacaaagccacaggataccactttaatgccatgacctgtgagggctgc
aagggcttcttcaggcgtgtcatgaagcgccccgcacagctctgctgcccgtttcagaac
acctgtgtcatcaccaagaccaacaggagacagtgccagtcctgccgactccagaaatgc
ctctcaatcggcatgaggagggaattgatcatgtcggatgaggccgtggagaagcggagg
atgcagatcaggaggaagaagatgcaggaggagcctgtaacgctctcccctcaacaggaa
gctgtcatacaggagctgctcaccgcacatcacaagaccttcgacatgacttgtgcccac
ttcattcagttccggcctttagaccgcgatcagaagtccaagtctcggtgcactggagag
ccaaacagcagcaggttcacttacacaaccacgcatgaagatgcagtgcagcagaccatc
agctttgtctccccctcgttcccttacttcagcattcacagtcctgaaactacagagaag
actcgacataaaagtgccatttttacctctctgccacattttacagacctcaccacatac
atgatcaagaatgtaatcaacttcggcaagacgcttacgatgttcagggctctaatcata
gacgaccagatctcgctgctgaaaggcgccacctttgagatcattctgatccacttcaac
atgttctttaatgaggagacggggatctgggagtgcggcccgctgcagtactgcctggat
gacgccatgcgagctggtttccagcgtcatctgctggaccccatgatgaacttccattac
acactgcgcaagctgcacctgcgtgaagaggagtatgtgctgatgcaggccatctcgctc
ttctcaccagatcggcccggtgtgaaacatcacagcgtgatcgaccgcaaccaggaaaca
ctagctctcaccctgaagacctacattgaggccaagaggaccgagccagagaaacatctg
ctgttcccaaagatcatggcgtgcctgactgagatgaggagcatgaatgaagagtacacg
aaacaagtgctgaaaatccaggacattcagcctgaagtgtctccgcttttactggaaata
ataagcaaagacagctaa
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