Carassius gibelio (silver crucian carp): 128020928
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Entry
128020928 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128020928
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128020928
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128020928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
wHTH_TTC3
TTC3_DZIP3_dom
TTC3_9th
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
TPR_1
TPR_2
zf-ANAPC11
zf-RING_11
CARD_2
Prok-RING_1
HEAT_Nup120
zf_RING_Vps8_fungal
PAM2
DUF6586
PHD
Motif
Other DBs
NCBI-GeneID:
128020928
NCBI-ProteinID:
XP_052463703
LinkDB
All DBs
Position
A10:5375752..5396650
Genome browser
AA seq
1385 aa
AA seq
DB search
MQRVNPIIHLFSGNSGARAHADGGTDRLKDTKSEMSPRKTKKGSSGVPEKPAVRSKHTPV
LDRPSPPEEDESSAGRRKRFCAAVQEAHTALSDQRCRNAQQSFSVALRILESSGTSELGL
TELDKSVLMYGYAVALLEIGQPEELDEAQRLFNKLESSERKFQLLVHYGMGRVYLKENRF
TKALECFTNAQLMIQRHITPGKLTWPTTKTTVEETQPACLKEHLKNFIEECKFPPKADAV
CRYQHCLSHTVKIYFSDPDFKGFIQLICCQSCRVQFHLSCWKKLKTLSFSDKSDKDFLKD
LCFTPDCGGQVCHIVIYGLTGLIKCEFKTSIPKIKPVGRLRIKQQCTSIKKLRSKNERKL
RRKQHQLATHSARQERKSVTAADDPKDPTAERETPTDCIYMDRVLHQIHDNRGLFKEESV
NISCILDHLRPWLDLFESKGHESVLNSRREPGALWELVDLLLESRNRVWARVFIQTLSLT
LHIKPRLQLWAQQLDNAGLKAAQSFISRHSSLLEEMDLKPLLSFTPLQETLIQTFGSVPQ
LFDRDGLTVMEYLRQAPAKDMRLFIWTLESNRERYHSCSFILDQYFEDDAVCLVIKKTDD
DEHMSSVFKSKNRHRKKKQKELKSVFVLSGMRGGHSRDEEDEEEELFSEEDSLMFLNSMD
PFSVPEHLRGQLEEFEEQYSGSSHRSHYQRILDNNPDPTKESLYDYFAQILEEHGPLCAS
DPLMMGELENFPPEAQQKISDAGGLECFLLESLRFVLMEELIGLMKHAVSLTDPAPSHLN
PSAEEFWPLTDPSHISVLPYDHKDEFTSSDAFLLLPDPYALDCPFSDLQEHTPASEQTRD
KHTAVCVRDLAEHTDVSINTEPYVCFERNSGDMLQTEKQRLQLLKEMEQMKEDHEAVQQR
RAQEISALQEETQNITLSMQVENHPWRRSEVLVCVCVCVCDCACVQIASTELSMFQQKLE
EVVRRDQQEKKENQETLKTLKMEIRDLADLHESHTRDISVKKKEYQAELERFLDVGNQCA
SERSSLEEEIKRFRDACVKAQRRSTMAQLCVLQSRCEHALRLLRMSISEGKMVVKHLTES
SLSYRSAALLSAVDDWKRHVCDAEDKLSRTQMQFEAQMDQVKSGARLSSLPDISVPSVPT
APALPVILSHPVPQPSGSHFYGPYGSLPAARTPTPTGRSTPQHADRLPEEPMSNRPSAPR
HLSVYDRILERLHMMFPHYTRKLLNNFIQEVRVSSGGALNTLTYDDVINRVAQLILDHQE
NTRERMNLTGGDAPGHMTPPSDASVRATGTPPPHTHVWKTVSEKHRNTALALNMEDPCII
CHEDMSPEEVCVLECRHSFHRECIKSWLKEQSTCPTCREHALLPEDFPMLPGRQRRSQTP
AAAFN
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgttaatcccataattcacttgttttcagggaattcaggagctcgagcacac
gctgacggaggaactgaccgactcaaagacacaaagagtgaaatgagtccacgaaagact
aagaaaggctcgtccggtgtcccagagaaaccagcggtccggagcaaacacacacctgtc
ctggacagaccgagccctccagaggaggacgagagctcggcggggaggaggaagcgcttc
tgtgctgctgtccaggaggctcacacggctctgagtgaccagcgctgcaggaacgctcag
cagtccttctccgtggcgctccggatcctggagtccagcgggacctcggagctggggttg
acggagctggataaatctgttctcatgtatggatatgcagtggccctgctggagatcgga
cagcctgaggaactggatgaagctcagcggttgttcaacaaattagagtcgtcagagagg
aagtttcagttgctggtgcattatgggatgggtagagtttacctgaaggagaacagattt
actaaagctctggagtgcttcactaacgcacagctgatgatccagagacacatcacacct
ggaaaactcacctggccaaccaccaaaactacagtagaggaaacacagccggcctgtctg
aaggaacatctgaagaacttcatagaggagtgtaagtttcctcctaaagcagacgcggtc
tgccggtatcagcactgcctctctcatacggtgaagatctacttcagcgatccagacttt
aagggcttcatccagctgatctgctgtcagagctgcagagtccagtttcatttgagctgc
tggaagaagctcaaaacactttcattctctgataagagtgacaaggattttctaaaagat
ttgtgttttacgccagactgtggaggtcaggtctgtcacattgtaatatatggcttgacg
gggctgataaagtgtgagtttaaaacatctattcctaaaatcaaacctgttggacgattg
agaatcaagcagcaatgtacaagtattaagaagttgaggtctaaaaatgaacgaaagctt
cggcggaaacaacatcagttggcgacacattctgcccgtcaagagagaaagagcgtaacg
gctgcagacgaccctaaagaccccacggcagagagagagacacccacagactgtatttat
atggaccgtgttttacatcaaattcatgataacagaggactatttaaagaagagtcggtg
aatatttcttgtattttggatcatctgcggccgtggctggatttatttgagagtaaagga
catgagagtgtgttaaacagccgtagagagcctggagctctgtgggagctggtggatctt
ctgctggagtccagaaaccgtgtctgggctcgagtctttatccaaacgctcagcttgacg
cttcatatcaaacccagactgcagctttgggctcagcagctggataacgctggtctgaaa
gctgcgcagtcgttcatcagtcgtcacagctctcttctggaggagatggacctgaagcct
cttctcagcttcacaccgctgcaggagacgctcatccagacgttcggcagcgttccacag
ttattcgaccgtgatggtttaactgtaatggagtatttaagacaggctccggctaaagac
atgcgtctgtttatttggactctagagtcgaatcgagagcgctatcactcctgttctttc
attcttgatcaatattttgaagacgatgctgtttgtttagtcattaaaaagacggatgat
gatgagcacatgagctcagtatttaagagtaaaaacaggcatcgtaagaagaagcagaag
gagttgaagtctgtgtttgtgctgtctgggatgagaggtggacattccagggatgaggag
gatgaggaagaggagctcttctctgaggaagactctctgatgttcctgaatagcatggat
ccgttcagcgttcccgaacacctgcgaggacagctggaggagtttgaggagcagtattcg
ggatcatcacaccggagccattaccagaggatcctggacaataaccctgaccccactaaa
gagagtttatacgattattttgctcagatcctggaggagcacggtcctctgtgtgcgtct
gacccgctgatgatgggcgagctggagaactttcctccggaggcgcagcagaagatctcc
gacgctggaggactcgagtgcttcctgctggagtctctgcgcttcgtcctgatggaggag
ctgatcgggctgatgaagcacgccgtgtctctgacagaccccgctccgtcacacctcaac
ccctcggctgaagagttctggcccctcacagacccctcacacatcagcgtacttccttat
gatcataaagatgagttcacatcttcggatgcattcctgctcctccccgacccgtacgcc
ctcgactgtcccttctcagatctgcaggaacacacaccagcgtctgagcagacacgggac
aaacacacggctgtgtgtgtgcgggatctggccgagcatacagacgtctccattaacacc
gagccatacgtgtgcttcgagaggaacagcggcgacatgctccagacggagaagcagagg
ctgcagctgttgaaggagatggagcagatgaaggaggatcatgaagctgtgcagcagagg
agagcccaggagatctcagcgcttcaggaggaaacacagaacatcactctgagcatgcag
gtagagaatcatccgtggagacgttctgaagtgctcgtgtgtgtgtgtgtgtgtgtgtgt
gactgtgcttgtgttcagatcgccagcaccgagctcagcatgttccagcagaaactagag
gaggtggtgaggagagaccagcaggagaagaaggagaaccaggagacgctcaagacactg
aagatggagatcagagacctggcagatttacacgagagtcacaccagagacatcagcgtg
aagaagaaagagtatcaggcagaactggagcgattcctagatgtcggtaaccagtgtgca
tctgagcggtcgagtctagaagaagagatcaagcgcttcagagacgcgtgtgtgaaggcc
cagaggagatccaccatggctcagctgtgtgtcctgcagagcaggtgtgaacacgcgctg
cggttgctcaggatgagcatctctgaagggaagatggtggtcaaacacctgacggagtcc
tcgctcagttaccgctccgctgcactgctgtcagccgtagacgattggaagagacacgtg
tgtgatgccgaagacaagctcagcaggactcagatgcagtttgaggctcagatggatcag
gtgaagagcggcgccagactgagttcactgcctgacatcagtgttcccagcgtccccaca
gcacctgctctaccggtcatactttctcatccagttcctcagccatccggctctcacttc
tacgggccgtacgggtcacttcctgccgcccgcacccccacacccacaggacgcagcaca
ccgcagcatgctgaccgacttcctgaagagcctatgagcaatcggccttcagcgccgcgg
cacctctctgtgtacgacaggatcctggagcggctccacatgatgttccctcattacacc
aggaaactgctgaataatttcatccaggaggtgcgtgtgtccagtggaggtgctcttaac
acgctgacctatgatgatgtcatcaaccgagtggctcagctcatcctggaccatcaggag
aacacacgtgagcgcatgaacctcacgggtggagatgctccgggtcacatgactcctccg
tctgatgcctctgtcagagccaccgggacgccaccgccacacacacacgtgtggaagacc
gtgtcggagaaacatcgcaacactgcgctggcgctgaacatggaggatccgtgcatcatc
tgtcacgaggacatgagtccagaggaagtgtgtgtgctggagtgccgccacagcttccac
agagagtgtataaagtcgtggctgaaggaacagagcacgtgtcccacctgtcgagaacac
gctctgttaccggaggacttccccatgctgcccgggagacagcgcaggagccagacgccc
gccgccgccttcaactga
DBGET
integrated database retrieval system
