Carassius gibelio (silver crucian carp): 128021266
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Entry
128021266 CDS
T08819
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128021266
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128021266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_CELSR2_9th
Cadherin_C_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
128021266
NCBI-ProteinID:
XP_052464298
LinkDB
All DBs
Position
A10:complement(13959952..14038046)
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AA seq
995 aa
AA seq
DB search
METQNCHLGGTPSFYSNGESSGFKIKMTKRVSFRCRRNYLLFFFLFLLLWSMTEGQTRYS
IPEELNMGAVVGNIAKDLGLKISELYDRKLRIASESGKQYFRVDLRRGEIVVNERIDREI
LCVKHANCLLPLQIVIEEPLQLYRVEVDIQDINDNYPHFQSTDRVLKIAESTVPGMRFPL
ESAIDPDVGSNSLKSYTLSKDECFSLKVKDLGDGRKVPELVLEKPLDREKKPMHQLMLTA
LDGGNPARSGTSQINITVLDINDNNPVFEKRVYKVAINENAKQGTSFLMVKATDLDEGPN
GDIQYSLGEHTSDELRSLFRINEKTGEIILNGELDYETTPVYNIEVSAKDRGVPEMEGHC
MVEIEVADINDNPPQIVLTSKPNPVREDAPSGTVVALISSRDIDSGDNGKVSLQTQSDIP
FILKPSFSNEYSLVTNGVLDRETYPEYNVEITAFDSGSPALNSKTIIPVKILDVNDNAPK
FPDNVYYVYVKENNTPGSIICSVSAQDVDVGVNGKISYSIENPKNWDTPISSYMYINSEN
GSIFSMLSFDFEKIKVYEVIVQAKDHGTPSLSSNATVYVFILDHNDNAPAVIYPSTSMGS
VTHQRMPRSSKAGHLVTKVTAVDADSGHNAWLFYRLAEATDASLFSVNLHTGEVRTKRAV
SEHDDSSQRLLIEVKDNGEPIQSTTVTVDILIEDGFHEPISDYREKTIEPNKKSGKITLY
LMISLASVSLLCLLTCFILLVKCARGSRGDSSCCIRRTNSDYKNSNRNLQIQLNTDGPIK
YVEVLGGDMMSQSQSFGSYLSPMSEFSDLTLVKPSSTTNFTDTLNVLDASLPDSAWTFES
QQQKPPNADWRFPPNQRPGPSGQHRFHTLQQRWTPYEKSRAGAHPDEAGASAGVIAGTRP
WPNPPTEAEQFQAMMVAANVSEATATLGPRYNPQYGPDYRQNVFIPGSTATLMANPQQQV
PQQALPPPQALPPVEAPKAAQTPASKKKPTKKDKK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaaaactgtcatcttggtggtacccctagtttttattcgaacggtgaatcg
tctggatttaaaatcaaaatgactaagagggtgtcattcagatgtcggaggaattatttg
ctcttcttttttctctttcttcttttgtggagtatgacagaaggacagactcgctactca
attcccgaggaattaaatatgggtgctgttgttggaaatattgcaaaagatttaggtttg
aaaatatctgagctgtatgaccgtaaattgcgaatagcttctgaatcaggtaagcagtat
ttcagagtggatttacgaagaggagaaattgtggttaatgagagaatcgacagagaaatc
ctttgtgtaaaacacgcaaattgtctactgcctcttcaaattgttatcgaggagccttta
caactttacagagtggaagtcgacatacaggacattaatgacaattatccgcattttcag
tctacagaccgcgttttaaagatagcagaatccactgtccctggaatgcgctttcctttg
gagagcgcaatagacccagatgttggcagtaattccttgaaatcgtatactttaagcaaa
gacgagtgttttagtttaaaagtaaaagaccttggagatgggcgcaaggtacctgaatta
gtactggagaaaccccttgaccgcgagaagaaaccgatgcatcagcttatgcttactgcg
ttagacggggggaatccggctagatctggaacttcacaaataaacattactgtcctggat
atcaatgacaacaaccccgtatttgagaaaagagtttacaaagtggccattaatgaaaac
gccaagcaaggaacgtcatttttaatggttaaagcaacggacttagatgaaggtcctaat
ggagatatacagtattctttaggggagcacacatctgatgagttgcgctcactgtttcgt
attaacgagaaaaccggcgaaattatcctgaacggtgagttagactatgagaccactcct
gtttacaacattgaggtcagtgccaaagatagaggggttcccgaaatggagggccattgt
atggttgaaattgaagttgcagatattaacgacaacccaccacaaatagtgctgacatct
aaaccgaaccctgtgcgggaggacgcgccaagcgggacagttgtagcgttaataagctca
cgggacatcgactctggtgacaatggaaaagtcagtctgcagacacagtctgatattcca
tttattttaaaaccatctttttcaaacgaatattcgttggttacaaacggcgttttagac
cgggaaacttacccggagtataacgtggaaatcactgcatttgactcgggctcgcccgct
ttaaatagcaaaacaataattccagttaaaattcttgatgttaacgacaatgccccaaag
ttccctgataacgtgtattatgtgtacgtgaaagaaaataacactccaggctctattatc
tgttcggtatctgctcaagacgttgatgttggcgtaaatggtaaaatatcatactctatt
gagaaccctaaaaattgggatactccaatatcctcgtatatgtacataaactctgaaaat
ggaagcatatttagcatgctttcgtttgactttgaaaaaataaaagtgtatgaggtcatc
gttcaggctaaagatcatggcactccatctttaagtagtaacgcgacagtgtatgtgttt
attctggaccataatgacaacgcacctgctgtcatttacccgtccacgtccatggggtct
gttactcatcagaggatgccccgttcttctaaagcaggacatctcgttactaaggtaaca
gcagtggacgcggactcgggtcataacgcctggctgttctacaggctcgcggaggccacg
gacgcgtctctgttcagtgtcaatttacatacgggagaggtgaggactaaacgcgctgtt
tcagagcacgatgactcctctcagagactgctgatagaagtaaaggataatggagaaccg
atccagtccaccacagtcacagtggatatactgatagaggacggctttcatgagcccatc
tcagattacagagagaaaactatcgagcccaacaagaaaagtggcaaaattactttatat
ctaatgatctctttggcttccgtgtccttgttgtgtctgttgacgtgtttcatcttacta
gtgaaatgtgcgcgaggcagtagaggcgactcaagctgctgtatcaggaggacaaactca
gattacaagaactccaacagaaacctgcagatccagctcaacactgacggacccattaaa
tatgtggaggttctgggaggagacatgatgtctcagagtcagtcctttggctcatatctc
tctccaatgtcagaattcagtgatctcaccctcgttaaacccagcagcaccacaaacttt
acagacacgctaaacgtacttgatgcgtcattaccagacagcgcgtggacgttcgaaagc
caacagcaaaagccccctaatgctgactggagatttcccccaaaccagagacctggaccc
agcggccaacacaggttccacaccctgcagcagagatggactccatacgagaagtccagg
gctggagctcatcctgatgaggcaggtgccagtgctggtgtgatagcgggaacaagaccg
tggcccaacccccctaccgaagctgaacagttccaggcgatgatggtggcagccaacgta
agtgaagccactgcaactctcggccctcgctacaatccacagtatggcccggactaccgc
cagaacgtcttcatcccgggtagtaccgccaccctcatggccaaccctcagcaacaggta
ccccagcaggcccttccccctccccaggcccttcctcctgttgaagcccccaaggcagct
caaactcctgccagcaagaagaagcctactaagaaagacaagaagtaa
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