Carassius gibelio (silver crucian carp): 128022178
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Entry
128022178 CDS
T08819
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04217
Necroptosis
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128022178
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128022178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128022178
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
128022178
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Ortholog
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Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
PH
Motif
Other DBs
NCBI-GeneID:
128022178
NCBI-ProteinID:
XP_052465450
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Position
A2:complement(3967504..3972774)
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AA seq
397 aa
AA seq
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MAVSSGCSTVLMSVRVSVRPLSVGSDSLRLQLSMNPNRAGLFTLTLRHTDRGGRSVSLAE
FDLRSVKYEVKTARCHEMRLSKPPHDCLTFTFRSEQEAQEWATVMMSSLRESHRVANISH
PSNDGEQKTKCGERNASVLSLSMKEELCLELSRAIEAGDAHAAVHYATDLAKQQITLSIQ
PAPRDTDHTEISLAVVIEDASSSCCVTVKVVPHVTVASLKQQMFVEYGFHPRVQRWVIAQ
CLCSDGRSLASYGIYRDGDTAFLYLLSARHCLGQQQENGVSMPLNTTLGPTPAPSGPVSH
DWRGYSTLPPRLSHSSTAGSSGCGPEKPSVSDIINLEMLQLGGSKLKSSNTQSGWSCPSC
TFINKSTRPGCEICSTDRPNPPDHSGVQQEKARRLNQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgagctcgggctgcagtacggtgctgatgtcggtgcgggtgtcggttcggccg
ctgtctgtgggctcggactcactgcgactgcagctcagcatgaacccgaaccgcgcggga
ctcttcacgctcacactccgacacaccgaccgcggaggacgcagcgtgtctctggcagag
ttcgatctgcgctcagtcaagtacgaggtcaaaacggctcgatgtcacgaaatgcgtctc
agcaagccgccccacgactgcctcacgttcaccttccgcagcgagcaggaggcgcaggag
tgggccaccgtcatgatgtcatcgctccgagagtctcacagagttgccaacatttctcat
ccttcaaatgatggagagcagaaaacgaagtgtggcgagagaaacgcatcagtcttgtca
ctgtcaatgaaagaggagctgtgtctggagctgtctcgagcgatcgaggctggagatgct
cacgccgctgtgcactacgccacagatctggccaagcagcagatcaccctgagcatccag
ccagcgccgcgggacacggaccacaccgagatcagcttggctgtggtaatagaagacgcg
tcgtcctcctgctgtgtcacagtgaaagtcgtccctcacgtgaccgtggcctctctgaag
cagcagatgtttgttgagtatggtttccaccccagggtgcagcgctgggtcatcgctcag
tgtctgtgctcggacggacgctctttagcgtcgtatggcatctacagagacggtgacact
gcgttcctctacctcctgtctgctcggcactgcctcggtcagcagcaggagaacggtgtg
tccatgcccctgaacaccacgctcggccccacgccggcccccagcggccccgtcagccac
gactggagaggatacagcacgcttcccccccgcctgagccacagcagcacagcaggcagc
agtgggtgtggcccagagaaacccagcgtcagtgacatcattaaccttgaaatgttgcaa
cttggaggatccaaactgaaatcaagtaacacacagtcaggctggtcctgtccttcctgt
acgttcataaataagtctacgagacccggctgtgaaatctgcagcacagatcgacccaat
cctcccgatcacagcggcgttcagcaggaaaaagcaagaagattgaaccagtga
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