Carassius gibelio (silver crucian carp): 128025030
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Entry
128025030 CDS
T08819
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128025030
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128025030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128025030
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
128025030
Membrane trafficking [BR:
cgib04131
]
SNARE
SNARE associated proteins
Others
128025030
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
128025030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
128025030
NCBI-ProteinID:
XP_052466954
LinkDB
All DBs
Position
A12:complement(7694700..7711359)
Genome browser
AA seq
1029 aa
AA seq
DB search
MLATQTPESGPEARDGKQWIKEKIARTLKVLQKRYITTDTAVTSEDLEANLLCCALEAVF
IHGIKSKFIRFDGSHARKGGSRGALPQPVFWSLLKSVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLTSLFREGSNLGSYYQPGALLLDPEDREVLLTLLQCLSSMTFQLS
YKSAVLNEWTNTPLVLAGLCPPTPADEQLVGPKRKESWDTVSQSSGGSGGSDWAQEVLQR
EPRKEQSEGCEPNTLLTSSNLSLDTSGSSPLSSSLSSDSLLQGQELRSPEKEPWSCDTEI
SQHTRQKITASEESGCSDQDLKEDLDVSVPASDSAARADDTSTHTPPTAAQDTHQSDAHI
SEQSKASSEKMSAETEEGTAEESETLDETVIESAESEQKKDSSDDTGTEKTSDPDAVSPE
TPTVSSSVEQSQHAAYRRAASTVSRKTSTDSLYSSCISTSWISEDDFYKPEEMGSSEAYA
VIDVVQMNGQVTLTSEPDSVQPPPSVVHRRPNGLRNPFRGLLKLGQLQRRGAVGMWRDYY
CELSPFELRLYTNAEERICYENLSLLRCEDVHLSSSNEGRFRLSFSGKRIYLRAPSRGEA
EDWVDRIVEAINKLRPTMRDEQWEVLHTSSDQDVPSQTPSTPKHIISGLPDPPPLDWTRL
KDPEPDAVKEAVVYQNLEEKGWRSVLLSLSLEALRGYRVQGDSKVPLFSYSIGSIRDVVP
DVSLGSPAFFKVLTAQETLTLRAESGEAARGWRSLIRGALDSYLETEDDGVSAVVQHRLK
GDGGLLSHLSTVPNERGLDAQNFKCAGCPRQIGMSLGRARLCEFSGQYYCERCHQGDTTI
IPSRMLHNWDLTMHEVSKQAFKLLTQIEHEPLLNLDLLTPDLFDHTDIMAKVRSLRQRLR
FLGDYILICRSGISRQIQPRLQQRTYLLDNSDLYSVLDLQQIADEHYESYLQSLIQFGTK
HVLHCDLCTQRGFICQICNTDNIIFPFQFDSTTRCNVCKTVFHSSCKAKCPVCPRCVRIQ
KYMERDLED
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccaaacacctgagagcggcccggaggcaagagatggaaaacagtggatc
aaggaaaagatcgcacggaccctaaaagtcctgcagaagcggtacatcaccacagacacg
gcggtcaccagcgaggacctggaggctaacctgctgtgttgtgctttggaggcggtcttc
atccatggaatcaagagcaagtttattcgatttgatggaagtcacgcgcgcaaaggaggg
tcgcgaggagcccttcctcagcccgtcttctggagcctgttgaagagcgtcacccacagg
gatgtcgttcaagaactggaacgtctaagcttcataaactcagacatcgggcgctgcaga
gcatgggttcgcctggcgctaaacgacgggcttctggagtgttacctgacctcgctgttt
cgcgaagggtccaacttgggctcgtactatcagcccggggctcttttgctggacccagag
gaccgcgaggttctcctcaccctcctgcagtgtttgtcctccatgaccttccagctctct
tataaatcagcagtgctgaatgagtggaccaacacacctctggtcctcgcgggtctgtgt
cccccaacgccagccgacgagcaacttgtaggccccaagcgcaaagagtcttgggatacg
gtctcccagtcatccggaggttctggaggctcagactgggctcaggaggtgctccagagg
gagcccaggaaagagcagagcgagggatgtgagccgaacactctgctgacgtcgtcaaac
ctgagtctggacacgtccggatcatcaccgctgtcctccagcctgagctctgatagtctg
ctgcagggtcaggagctcaggagtccagagaaggagccctggagctgtgacacggagatc
agccaacacacacgacagaagatcaccgcttcagaagagagcggttgctcggatcaggac
ttgaaggaagacttggatgtgtccgtaccagcttcagactctgcagctcgagctgatgat
acgagcacacacacacctccaacagctgcacaggacacacatcagtcagatgcacacatc
tcagaacaatctaaagcaagctcagaaaagatgtcagctgagacggaagaagggacagcg
gaagaatccgagactctagatgaaaccgtcatcgagtctgcagaaagtgagcagaagaaa
gactcctctgatgatactgggaccgaaaagacctctgaccctgacgctgtttctccagag
acccctaccgtctctagctcagtggagcaatcccagcatgccgcatacagacgcgccgcg
agtaccgtcagtaggaaaacctccacagactctctctattcctcctgcatatccacatct
tggatatcagaggatgacttctacaagccagaagaaatgggcagttctgaagcgtatgcc
gtcattgacgttgtgcagatgaacggacaggtgacgcttacctctgaaccagacagcgtc
cagcctccacccagtgtagtgcaccggagacccaacggtcttcgtaacccgttcaggggt
ctgctgaagctgggtcagctgcagcgccgcggtgcggtgggcatgtggagggattattac
tgcgagctctctccgtttgagctgcggctttacaccaacgcagaggagcgcatctgctat
gaaaacctgtccctgctgcgctgtgaagacgtccacctgtcctccagtaacgagggacgg
ttccggctctccttttcgggcaaaagaatctacctgcgtgctccgtctcgaggagaggcc
gaggactgggtggatcgcatcgtggaggccatcaacaaactacgtcccacaatgagagat
gaacagtgggaggtgctccacacgtccagcgaccaggacgtcccctcacagacaccctca
acccccaaacacatcatctcaggacttccagatcctccaccgttagattggacccgtctt
aaggaccccgagccagatgctgtgaaggaagcggtggtctatcagaacttggaggagaag
ggttggcgctctgttttactctcgctctccttggaggccctcagggggtaccgggtccaa
ggggactccaaggtgcccctcttctcttactccattgggagcatcagggatgtggttcct
gatgtttctttaggaagtcctgcgttctttaaggttctgactgcgcaggagactctgacg
ctgcgggcggagagcggagaggcagcgcgaggatggaggagtctgatcagaggagcgctc
gactcgtatctggagacggaggatgatggcgtctcagcagtggtccaacacagactgaag
ggggatggggggctgctgtctcacctgtctactgtcccgaatgagaggggactagatgca
caaaactttaaatgtgcaggttgccctcgtcagatcgggatgtctctggggagagccagg
ctctgtgagttctcgggtcagtattactgtgagcgctgtcatcagggagacaccaccatc
atcccctcacgcatgctgcacaactgggacctcacaatgcatgaggtctcaaaacaagcc
tttaagttgctgacacagatcgagcacgagccgctcctgaaccttgacctcctgacccct
gacctgtttgatcacactgacatcatggctaaagtacggagtctgagacagaggctgcgt
ttccttggagattacatcctcatctgccgcagtggcatcagcagacagatccaacccaga
cttcagcagcggacatacttactggataacagtgatctctacagtgtattggacttgcag
cagatcgcagacgagcactacgaatcttacctgcagtctctgattcagtttgggaccaag
cacgtgctccactgtgacctttgcacccaaaggggctttatatgtcagatctgcaacacc
gacaacatcatcttcccttttcagttcgacagcaccaccaggtgtaacgtctgcaagacc
gtgtttcattcctcctgtaaggccaagtgtccggtctgtccacgctgcgtccgcatacag
aagtacatggagagggacttggaggactga
DBGET
integrated database retrieval system
