Carassius gibelio (silver crucian carp): 128025839
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Entry
128025839 CDS
T08819
Name
(RefSeq) DNA nucleotidylexotransferase-like isoform X1
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128025839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128025839
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
128025839
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
128025839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
DNA_pol_B_palm
BRCT
NTP_transf_2
GH3_N_vert
Motif
Other DBs
NCBI-GeneID:
128025839
NCBI-ProteinID:
XP_052468351
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All DBs
Position
A13:complement(1740369..1817890)
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AA seq
490 aa
AA seq
DB search
MFPTAITRKRQRPEVAFARGHEEVKFRDVTLFLVERKMGKSRRNFLSNLARSKGFRVDDA
LSADVTHVVSEGNAAQDLWSWLEEQGFREMHDKHVLHISWFTESMSAGRPVPLQIRHYIQ
NPAVGQRSCSHPSAEPETAVSPYACQRPTTLNNRSKIFTDALEVLAENLEFCGNPGPSLA
FRRAASVLKSLPDAPRRLEETQHLPCLGEHSRAIIEEISEYGSCSRVEEILNDERYRTMK
LFSSVFGVGPKTAENWFCRGLRTFEQVLNDPSIRLNRMQTAGFLFYEDISKPVSRTEAIA
LKIIVEEAVTSVIPSASVSITGGFRRGKEFGHDVDFIIKTPEAGQEDSILPAVIERFKRQ
SILLYSDLQESTFDLRQLPTHRFEAMDHFSKCFLIVKLKGEQETGRDWRAVRVDLVAPPL
ERYAYALLGWTGSMLFERDLRRFARLERGKLLDHHALYDKATNTFLSANTEEDIFTHLGL
EYIEPWQRNA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgacagctattactcgaaagcgtcagcggcctgaagtagccttcgctcggggt
cacgaggaggtcaagttcagggatgtgactctgttcctggtggagaggaagatggggaaa
agcaggaggaatttcctctctaatctcgccagatctaagggcttccgcgtagacgacgct
ctcagtgctgacgtgacacacgtcgtgtcggagggaaatgcagcgcaggatctctggagc
tggctcgaggagcagggattcagagagatgcatgacaaacatgtgctgcacatcagctgg
tttactgagagcatgagcgccggccggcccgtgcctctccaaatcagacattacatacaa
aatcccgctgtgggtcagaggtcgtgttcacatccgtcagccgaacctgagactgctgtg
tctccgtacgcttgccagagaccaaccacactgaacaaccgcagtaagatctttacagat
gcgctggaggtgctggcggagaacctggagttctgtgggaatccgggtccgagcctggcg
ttccggagggcggcgtctgtgctcaagagtctccctgatgccccgagacgtctggaggag
acacagcatctgccctgcctcggagaacacagccgggccatcatagaggagatctctgaa
tacggatcgtgctccagagttgaggagatactgaatgatgagaggtatcggacgatgaag
ttgttcagcagtgtcttcggggtcggacccaagacggcagagaactggttctgtagagga
ctgcggacgtttgagcaggtgctgaatgaccccagcatcagactgaaccgcatgcagacc
gcagggttcttgttttatgaggacatcagtaagccggtgagcaggacagaggccatcgct
ctgaagattatagtggaggaagctgtcaccagtgtcatcccatcagccagcgtcagcatc
acaggaggattccgcagggggaaggagttcggacacgatgtggacttcattataaaaaca
cctgaggccggacaggaggactctattctgcccgccgtgatcgaacgattcaaaagacag
agcatcctgctgtactcagacctccaggagtcgacctttgacctgcggcagctgccgact
caccgcttcgaggccatggatcatttcagcaagtgtttcctgatcgtgaagctgaagggc
gagcaggagacggggcgtgactggagagcggtgagggtggatctggtggctcctccgctg
gagcgttatgcttacgctctgctgggatggaccgggtccatgctgtttgaaagagacctg
agacgattcgccagattggagcgaggaaaactgctggaccatcacgcgctgtatgacaaa
gctacgaacaccttcttgtctgctaacaccgaagaggacatcttcacacatttggggtta
gagtatatcgagccttggcaaagaaatgcctag
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