Carassius gibelio (silver crucian carp): 128026196
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Entry
128026196 CDS
T08819
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret-like isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128026196
04020 Calcium signaling pathway
128026196
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
128026196
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128026196
Protein kinases [BR:
cgib01001
]
Receptor tyrosine kinases (RTK)
RET family
128026196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
RET_CRD
Cadherin
Pkinase_fungal
RIO1
ABC1
Haspin_kinase
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
128026196
NCBI-ProteinID:
XP_052468986
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Position
A13:13274604..13295032
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AA seq
1106 aa
AA seq
DB search
MGTTRGIVWGDIALLLLLLSEGSLGLYFPQRVYTESIYVGQLQGTPVLQVYSMRDSPTER
PYFTLCSHRDSYTSWFHMDEETGVLSVNKTLEWSDFTSIRSSSVRPVKDINLKVGVSSVP
MQKAKCLLPTVEVKLMFINDTAPSCGQVELKTLCFPDKVPNPHITENRMPGALRQLRRFT
HMSICPNYTITYAVEPVSPAPFAVDSSTSELVVTAPVDREDSEVYHLDLVCMIRTEEKLE
KFFSSLHVNIYDEDDNPPYMNGTDTVDIKIEFNRSEGTVYGTLFVYDRDTTPVYPTDLIQ
NKLVGTLITNDSWIRNTTTIEHKFREEKAIFGNVRGTVHEYKLKLSQNLSVTEQRSFQLD
YLVNDTTFPGPEGTVLLRFNVTILPVPIQFSNITYFFTVSLKATTYSQIGSVCVDNCLKF
KGIDVTYQLEIADRNISADAQSCYRAVGLAQSPNEKTAVLYVNDTEVLRRPQCQKLQYVV
IAEEQQNKFQAKTQLDVIFEDEADLMRLDEQRILPCAEKRERGECEASRGLGAPTGRCQW
RQGRDKGISRKYSTCSPDLRTCPDAYCDAIESKNISICPQDCSSQPIIGGYERDLYGIKA
GHGTCYCFSGKCFCEKDESEESTCEEMCKIIIATGVLLSFIVSIVLSSYFIHCYHKSTTK
PPIASAEMTFRRPAQSYPISYNNVRRTSLDSMENQVAIETFKIPEDPKWEFPRKNLVLGK
TLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHPHVI
KMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENPDERALTM
GDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKR
SKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY
RMEKPENCTDEMYNLMLRCWKQESDKRPTFSDISKELEKMMVKSRDYLDLAASTPADALL
YDDSLSEEDTPLVDCSNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRLDATNPVFT
RYANDSVYANWMALHSPAKIVDTLDS
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgggaactacgcgtggaatcgtttggggagacatcgcgctgctcctgcttctcctgtct
gaaggttcacttggactctattttcctcaaagggtgtacacagaaagcatctacgtgggt
cagctacaaggaacaccggtccttcaggtctattcaatgcgggacagccctacagagagg
ccctatttcaccttgtgctcccatagagactcttacacatcatggtttcacatggacgag
gagactggagtcctttcagtgaacaaaacccttgagtggagtgacttcactagtatacgc
agcagctcagtcaggcctgtgaaggatatcaacctgaaggtcggagtctcttcagtgccc
atgcagaaagcgaaatgcctccttcccacagtggaggtcaaactgatgttcattaatgac
acagcaccctcctgtggtcaggtcgagctgaagacattgtgtttccctgacaaggttcca
aacccccacatcacagagaaccgtatgccaggggccctgcggcagctccggcgctttaca
cacatgagcatttgccctaactacaccatcacttatgcagtggaaccagtctctccagct
ccatttgctgttgacagctccacttctgaactggtggtcactgcacccgtggaccgtgag
gacagtgaagtgtaccatctggatttagtgtgtatgatacgaacagaagaaaagctggag
aagttcttcagttctctgcacgtgaacatctatgatgaggacgataatcctccttacatg
aatgggactgacacggtggacatcaaaatagagtttaaccgcagcgagggtactgtgtat
ggaactctgtttgtatacgacagggacacaacgcccgtttatcccacagacctaattcag
aataaattagtgggcaccctaataacgaatgactcctggatcagaaacactactactatt
gaacacaaatttagggaagagaaagccatctttggaaatgtccgtgggacagttcatgaa
tacaagttgaaactcagtcagaatctgtctgtgacagagcaacgctcatttcagttggac
tacctagtcaatgacaccaccttcccaggcccagagggaacagtgctgttacgtttcaat
gtgactatcctgccggttcctattcaattctccaatatcacctacttcttcacagtgtca
ctgaaagcaacaacatactcccagattggaagcgtctgtgtggacaactgtctgaagttt
aagggcattgatgtcacgtatcagttagagatcgcagacaggaacatctctgctgatgct
cagtcatgttatagggcagttggccttgcacagagcccgaatgagaagaccgctgtgctc
tatgtgaatgacactgaggtgttacgcagaccacagtgccaaaagctacagtatgtagtt
attgccgaggaacagcagaacaagtttcaggccaagacgcagcttgatgttatttttgag
gatgaagcagatctcatgaggctggatgagcagcgcattttgccttgtgcagaaaagaga
gagcgaggggagtgtgaggcgtctcgaggcctgggagccccaacaggcagatgccagtgg
agacaaggcagagataaaggaatatccagaaaatattccacctgttcccctgacctccga
acgtgtccagatgcgtactgtgatgccattgagagcaaaaacatatccatatgtcctcag
gattgctccagtcagcctataatcgggggttacgagagggacctgtatggaatcaaagct
ggacatgggacctgctactgtttttcaggaaagtgcttctgtgaaaaggacgaatcagaa
gagtctacgtgtgaagaaatgtgtaagatcatcattgcaactggtgtcctcctctccttc
attgtctcaattgtcctgtcctcgtacttcatccactgctaccacaagagcacaactaag
cctcccatcgcctcagctgaaatgactttccgccgaccagcccaatcctacccaatcagt
tacaataatgtccgtcgaacttctctagattccatggagaatcaggtggccattgaaacc
ttcaaaatacccgaagatccaaagtgggagttccctcgaaagaacttagttctgggtaag
actctcggagaaggagagtttgggaaggttgtgaaggccacggctttccggctcaaaggg
aaagcgggatacactacagttgctgtaaagatgttgaaagaaaatgcatctcacagtgag
cttcgagacctcctgtcagagttcacattgctcaagcaggttaatcaccctcatgtcata
aaaatgtatggagcttgcagccaggatggtccattatacttaatcgttgaatacgcaaag
tatggctcactgcggaacttcctgagagagagccggaaggttggacccagctacatgggc
aatgatgccaaccgcaactccagctacttggaaaacccagacgagagagctctgaccatg
ggcgacctcatctcctttgcatggcagatctccagaggaatgcaatacctggctgaaatg
aagcttgtccacagagatctggctgccaggaatgtgctggtggcagagggaaggaagatg
aaaatatccgactttggtttatctcgagatgtttatgaggaagattcatatgtgaagagg
agcaagggtcgtattcctgttaaatggatggctatagaatctttgtttgatcacatctac
accacacaaagtgatgtctggtcttttggtgtcctgttatgggagattgtaaccttgggt
ggaaacccctacccaggcattgctccagaacggcttttcaaccttctgaagacgggctac
aggatggagaagccagagaactgcacggatgaaatgtacaatctgatgcttcgttgttgg
aaacaagagtcagataagcgtcctactttctcagacatcagcaaagaacttgagaagatg
atggtgaaaagcagagactatctggatctcgcagcttccacgccagcagacgccctgctg
tatgacgactccctctctgaagaggacacacctttagtggactgtagtaacgcccctctc
cctcgaaccctcccctccacttggattgaaaacaagctctatggcatgtcatacccgaac
tggccagagaagagcccggtaccgctcaacagactcgatgccactaaccctgtctttaca
agatatgccaatgatagtgtttatgcaaactggatggctttgcattctcccgcaaaaatc
gtggacacgctcgatagttaa
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