Carassius gibelio (silver crucian carp): 128026352
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Entry
128026352 CDS
T08819
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128026352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128026352
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128026352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
128026352
NCBI-ProteinID:
XP_052469355
LinkDB
All DBs
Position
A13:17393956..17399817
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AA seq
462 aa
AA seq
DB search
MSAAGPPQSPSVDKTEVLVEDWCPVLAATFAYWDNILGPRVQHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISVLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPDKVNKIVLTLCLFLTPAE
RKCSRLCHPEGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSALWKAASEDDISSDNLLNAQDSYTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKSLTLLRYIEDETQKGKKPFRSLRNLKTDLDL
MMEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagccggtccgccgcagtctcctagtgtggataagactgaagtgctggtcgag
gactggtgtcccgtgctggctgcaaccttcgcttactgggacaacatcctgggacctcgt
gtacagcacatctgggcccccaaaggtcaagggttgtcgctgctgagtgatggcgaggtc
acgtttctggccaatcacacgctgaacggcgagatcttgcgaagtgctgagagtggcgca
gtggacgtgaagttcttcgtcctggcggaaaagggagtcatcatagtctcgctgattttc
gacggagaactcaagggtgataagaacacctgcgcgctgtcaatcatcctgccgcagtca
gagctaagcttttacctgccactgcacagcgtgtgtgtggagagactcaagcacatcatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctcagtgttatcatctgag
attgttcccataatggagctccttacctccatgaagaaacacagtgtacctgaggaagtg
gatttaaaggacactgtgctcaatgatgatgatatcggagacagctgtcacgaagacttt
ttacacaaggctatcagctctcatcttcagacgtgcggctgctccatggtggttggcagc
aatcctgacaaagtcaataagatcgtgctcacgctatgcctcttcctcactccagcggag
agaaagtgctctcgactgtgtcaccccgaaggctcgtttaaatatgacactggcctcttt
gttcaaggcctccttaaggactccacaggcagctttgtgttgccctaccggcaggtgctt
tactccccataccccaccacccacatcgatgtggacattaacacggtcaagcagatgcca
ccctgccacgagcacacgtaccatcagcggcgctacatgcgagctgagctcagtgccctc
tggaaggccgccagcgaggatgacatcagttctgacaacctcctcaatgcccaggactcc
tacacaccagacttgaatatatttcaggacgtcatgcacaaagacacacttgtgaagtct
ttcattgatgaggtgtttctgttgaaaccaggtttgtctctgcggagtgtgtatttgtcc
cacttccttctcctgctgcacaggaagtccctgacactgctcagatatattgaggatgag
acgcagaagggcaaaaaacctttcagatctctacgcaacctgaaaacggatttggactta
atgatggagggtgacttgaatatcatcatggcgatggcggagaagctgcgggcaggcctt
cactcctttgtttttggaaagtctttccttaccagtgtgcaggagcgtgacctcctcatt
aacttctga
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