Carassius gibelio (silver crucian carp): 128027301
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Entry
128027301 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04210
Apoptosis
cgib04217
Necroptosis
cgib04510
Focal adhesion
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128027301
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128027301
04217 Necroptosis
128027301
09144 Cellular community - eukaryotes
04510 Focal adhesion
128027301
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128027301
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
128027301
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128027301
03029 Mitochondrial biogenesis [BR:
cgib03029
]
128027301
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128027301
Peptidases and inhibitors [BR:
cgib01002
]
Peptidase inhibitors
Family I32: IAP family
128027301
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128027301
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128027301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
128027301
NCBI-ProteinID:
XP_052470723
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All DBs
Position
A14:complement(4350846..4359384)
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AA seq
452 aa
AA seq
DB search
MAQSSQDGEIVADDGWSSMNNRVNSFQRFPHSDEFSAERLARAGFYFTGQADRVCCFSCH
ATVEDWNQGDTPLNRHQQASPNCRFLSCAHGLRVSNFIQSPDYDEEAEAREFQLRTGEVL
DQTIYPSKPYMKSEEARLNTFGNWPASAPVQPEDLAAAGMYYLGTEDIVECFCCGQKLAG
WEPGDDAWGEHAKHYPNCFFILGHDVGNVPLQTPRPRVNGQRASMETFEGRLESFRDRQH
PIDPERLARAGFYSTGEQDQVLCFRCGGGLKTWRPEEDPWEEHARHYPGCSFLQEEKGEE
FVNSVQLRYPKGDHSRSSQNGFTSDEHIAQKVLQSEIAHKAVEMGFDRTIVDRTILQKLR
QNANGYTSVEALIEDISAQESVCTMPEKSEDPMTKLEKLQREKLCKVCMDSDIDIVFIPC
GHLVTCQKCSESLNKCPICCAAITQKIKTYNA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcaagtcaagatggagaaattgttgctgatgatggatggtcatccatgaat
aatcgtgtgaattccttccagcgcttcccccattctgatgaattttcagccgagcggctg
gccagggcaggcttttattttacaggtcaggcggacagggtgtgctgtttcagctgccat
gcgacagtggaggactggaaccaaggggacaccccactgaacagacatcagcaagcatct
cccaactgcaggttcctcagctgtgctcatggcttgagagtctccaacttcattcaaagc
cctgattacgatgaagaggccgaagccagggagttccagctccgcacgggagaggtgctg
gatcagaccatttatcccagtaagccatacatgaagagtgaggaagctcggctgaatact
ttcggtaactggcctgcaagcgctccagtccagcctgaagacctggcagcagcaggaatg
tattacttgggcacagaagacattgtggagtgcttctgttgtgggcagaagctggcagga
tgggagccaggtgacgatgcctggggtgaacatgcaaagcactacccaaactgcttcttt
atcttgggccacgatgtgggcaatgttccgctgcaaacacctagacccagggtgaatggg
caaagagcctctatggagacttttgaggggcgtcttgaaagcttcagagacagacaacat
cccatagaccctgagagactggcaagagccggtttctacagcacgggagaacaggaccag
gtgctctgctttcgatgtggaggaggactgaagacctggaggcctgaagaagacccttgg
gaggagcatgccaggcactatccaggctgcagtttccttcaggaagaaaaaggagaagaa
tttgtcaacagtgtgcagctgagatatccaaaaggagaccattcaagatcaagtcagaat
ggctttacaagtgatgagcatattgctcagaaagtcctgcagtcagagattgcacataaa
gctgtagaaatgggttttgaccgaaccatagtggatcgcaccattctgcagaaattacgt
cagaacgccaatggttatacttcagtagaagcacttattgaagacatcagtgcacaggaa
agtgtctgtaccatgcctgagaaatctgaggaccccatgacgaaacttgagaaactccag
agggagaagctgtgtaaagtctgcatggacagtgacattgacattgtcttcattccctgt
ggacacctggtcacctgtcagaagtgttcagaatccctgaacaagtgtcccatctgttgt
gccgccatcacgcagaagataaagacatacaatgcctga
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