Carassius gibelio (silver crucian carp): 128029254
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Entry
128029254 CDS
T08819
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128029254
Enzymes [BR:
cgib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
128029254
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_3
DUF4962
Sulfotransfer_1
AbiGii_2
Motif
Other DBs
NCBI-GeneID:
128029254
NCBI-ProteinID:
XP_052472876
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Position
A2:complement(17775527..17780820)
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AA seq
1192 aa
AA seq
DB search
MENMQRSAVLLCVLAVGLTFCGISSASDRYAPLNEHQTDNTTLSSHLHPKLYFDQTELRL
MKQRATTTHRHIFKAIQNAVSIMLSSAAVYQPPVSHEDFGKKWNEIYGNNLPPLALYCLL
QPEDATASQFLIEYMDRMVEYPDWTVSSAPNDEVPIAHSLTGFATAYDFIYTFLDTRRRL
RYLKKIRSVTEELFELSKHRGWGKQFLQNHQTTNILAILIGALVVGEHNDPETMIWKQIS
VNYMEKTMFLLSHIVDGSLDEGVAYGSYTAKSITQYVYLALRHFQIDNTQNNWLRAHFMF
YFATLLPGFQRTVGIADSNYNWFYGPESQLVFLDAYVLRNGSGNWLAEQIRNHRPKDGPM
VQSAAQRWATLHTEYIWYDSDLTQQPPPNFNKATMHIFSNWGVVTYGAGLPQTKGNTFVS
FKSGKLGGRAVYDIVHAQPYSWLEGWTNFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKY
SYLNNVLVFSPSPTSQCNQPWEGQLGECSKWLRWGEKEVGDTAGEVIAASSHQDILFVSG
ESVSAYSSAMKLKSVYRALVLLNSQTLLVLDHIEKHEHSPLNSLSAFFHNLDIDLRYVPH
RSFGRYNGALMDVWDAHYKMFWLDAQGSSPVAQIQEAEQAAEFKKRWTQYINVTFPMEKP
VTRVAYLMHGPYAKVSDCRFIDNSKNGVKISVTLNDTETVVSIVTNYEDIEARHDYLGFA
GFAKTEDSRRIVQFGRGIKTLPSQVTKDSVFDFGLVVNISVVLTLCLAFGYVMKKRKFHM
SFNMLIHCTLVCMLLLWVTELLYHFYGCDQLLCNVKPKDRNIYDGTDSSVRDLLPIVTIT
SMPGSGAEILQHLFDNSSDFVFLRIPSAYLRFPISPFVSLVDACEWSKADAQNGRFRVIQ
GWFHSIVHNVKLHLQNIQLHQSNDEIENNVKEKGQRKRRMLLSGQMRTGGGKSTHMDIGY
IQELRQHLVKYPNARPVLNMGSEGWFLKLPYLQEVIGRSLRSVHVVRDPRAWIYLMLYSS
KPSLYSRKNIKRHIVNIFKQNTDGVDQGCAIVDSQFLPLKKILSQPDPNPVQLLAQLWLA
HNSAGLKVSAGLPPHTYLIVRFEDVVYFPEETARKIHNFLGIPVAPAALNQLTFAASTNL
YNLIYEGDISPAKINIWKENMAVDEIKLIEDTCWPVMERLGYKRHTVRHSFL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatgcagaggtctgcggttttgctctgtgtcttggctgtgggactgactttc
tgtggaatttcgtctgcctcagacagatatgcgcctttgaatgaacaccaaacagacaat
accaccttgtcctcacatcttcaccccaagctatactttgatcagacagaattgcgtttg
atgaaacagagggccaccaccacgcatagacacatatttaaagctattcaaaatgctgtt
tctattatgttatccagtgcagctgtttaccagcctccggtgagccatgaggatttcgga
aagaaatggaatgagatctatggtaacaatttgcccccccttgcactatactgtctgctt
caacctgaggatgctaccgcctctcaatttttgattgagtacatggaccgaatggtggag
tacccagattggacggtgtccagcgcaccaaatgatgaggtcccaatagcccactctctc
actgggtttgccacagcgtatgatttcatttacacctttcttgacacccggagaagactg
cgatatctcaagaaaatacgatctgttacagaggagctattcgagctttccaagcacaga
ggatgggggaaacaatttctacagaaccaccagacaactaacatactagccattctcatt
ggtgctcttgtggtgggggaacataatgacccagagaccatgatatggaaacaaatatca
gtcaactatatggaaaagaccatgttccttctgagccacattgtcgatggctctcttgat
gaaggtgttgcatacggtagctacacagcaaaatccatcacccagtatgtttacttagca
ttgcgtcattttcagatagacaacacacagaacaactggctcagagctcacttcatgttt
tactttgctacactgcttcctggatttcaaagaacagttggcattgcagactccaattac
aactggttctatgggccagagagccagcttgtgtttttggatgcatacgtgctccgaaat
ggctcaggaaactggctggcagagcagattaggaatcatcgtcctaaagatggacccatg
gtgcaatcagcagcccaacgctgggcaactttacacacagagtacatatggtatgactct
gacttaactcaacagcctccacctaactttaataaagcaaccatgcacattttctccaac
tggggtgtggtgacgtatggagcagggttaccacaaactaagggtaatacttttgtgtca
tttaaatctggaaaattaggagggcgagcggtgtatgatattgtccatgcacaaccgtac
tcttggttagaaggctggacgaactttaaccccgggcacgagcaccctgatcaaaactca
tttacttttgcaccaaatggacaggtgtttgtctctgaggccttgtatggtcctaaatac
agctatcttaacaacgtgctggtgttttccccctcacccaccagccagtgtaatcagcca
tgggaaggacagttgggggaatgttcaaagtggttacgatggggagaaaaggaagtcggg
gataccgctggggaggtcattgcagcttcatcgcatcaggacattttgtttgtgagtgga
gaatctgtgtcggcctattcatctgccatgaagctaaagagtgtgtatcgggcccttgtg
cttctcaactctcaaacattacttgttctggaccacattgagaaacacgagcactcccct
ctcaattctctcagtgcgttctttcacaaccttgacattgatctcaggtatgttcctcac
agatcatttggaagatacaatggggctctgatggatgtgtgggatgcacattacaaaatg
ttctggctggacgctcaaggatccagccccgttgcccagatacaagaggcagaacaggct
gccgaattcaaaaagagatggacgcagtacataaacgtgacctttcccatggagaaacct
gtcactagagtggcttatttgatgcatggcccatacgccaaggtctcggactgtagattc
atagacaacagtaaaaatggagtaaaaatatcagtgactcttaatgacacagaaactgtt
gtgtcaattgtaacaaactacgaagacattgaggctagacatgactacttgggctttgca
ggctttgctaaaacagaagacagcagaagaatagttcagtttggccgggggattaaaacc
ttgccaagtcaagtcacaaaagattctgtgtttgactttggattggtggttaacatctct
gtggtactgactctatgtcttgcttttggttacgtaatgaagaaaaggaagtttcatatg
tcgttcaatatgctaattcattgcactctggtctgtatgctgttattgtgggtgactgaa
cttttgtatcatttttatggctgcgatcagctcttgtgcaatgttaaaccaaaagaccgc
aacatatatgatggaacagactctagcgtccgtgacctcctgcccatcgtcaccatcaca
tccatgccaggctcgggcgcggagatcctccagcaccttttcgataatagctctgacttt
gtattcctccggatcccttcggcctaccttaggttccccatatctcctttcgtatctctg
gtggacgcttgcgagtggtccaaagcagatgcgcaaaatggacgatttcgagtcattcag
ggatggttccattccatagttcacaatgtgaaactacacctgcaaaatattcaattgcac
cagagcaatgatgaaatagaaaataatgtcaaagaaaaaggacaaagaaagagaagaatg
ctgctgtcagggcaaatgaggacagggggcggcaagagtacccatatggacatcggatac
atacaagagctcaggcagcacctggtgaagtatccaaatgcccggcctgtgctgaacatg
ggcagtgaaggctggttcttgaagctgccgtatcttcaagaggtcataggtcgctcactt
cgctcagttcatgtggtacgagacccacgtgcatggatttatctcatgctctacagcagc
aagccaagtctgtattcacgtaagaacattaaaagacacatcgttaacatttttaagcag
aacactgatggtgtggatcagggctgtgctatagtggactcacaattccttcctttaaag
aagatcctctcccagccagatccaaaccctgtacagcttctagctcagctatggctggct
cacaattcagccggactcaaggtgagcgctggcctccccccacacacttaccttatagtc
agatttgaagatgttgtatattttcctgaagagacagcgagaaaaatacataactttctt
ggaatccccgttgcaccagctgcgttaaaccagctgacattcgccgcgtccacaaatctg
tataatctgatatatgaaggggatatatcacctgccaaaatcaacatttggaaggagaat
atggctgtagatgagattaaactcattgaagacacatgctggcctgtgatggagaggctg
ggttataaaagacatacagtcaggcattcatttctgtaa
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