KEGG   Colletes gigas: 122399012
Entry
122399012         CDS       T07492                                 
Name
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cgig  Colletes gigas
Pathway
cgig03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    122399012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgig03400]
    122399012
Enzymes [BR:cgig01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122399012
DNA repair and recombination proteins [BR:cgig03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     122399012
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT DNA_ligase_IV RNA_ligase BRCT_2 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 122399012
NCBI-ProteinID: XP_043255246
LinkDB
Position
Unknown
AA seq 898 aa
MSVTLAAKIEFVKLCNVLEEIKKARVAKRTEILEKFIQQCRLAGLKHKTECPDADVSLFS
IMRLLLPSRERERGAHNLKEKSLANLYVRVFCLGKGSKDANNLVQYKTPTTKKSTGSDFA
EKAYWILRNRLPRESSGFTIERINLFLDNISSKNDNIRQKDETFKVLLGKTNALEFKWIT
RIILKDLKLGIGMKRILQVFHPDANALSDVSTDLRQICETLSDPQLRYHHDIQIFSHFKP
MLLERCRIEDTKTLFSKCEQYFVQTKYDGERSQMHMKDGKYKYFTRQGYDITKNYGYGET
SSSGFMSSVFHRLLKPQCKSIILDGELMGWHKQKKLLGSKGMNFDVKKLSENSHHQPCFI
ALDIILYNDVLLINELYEKRLKILEDAFKEEEGCLMLCKSIKISQREELCRVFNESIQNK
EEGIVLKKYDMKYKPNVRDGSNCYKIKAEYSDDLVQDVDLIILGGYYGGGKFMGLMKSFL
MAVASPSNVPGENPSKFLSVVSVSNGLSMETLKELWKRFEGKWQNECPENVSPPRLDPPN
KWIRPEESIILTIRATEMTQSKDYPTGYSLRFPRVMDVRTDKPWYSVCTTTELLSLIKDS
RPIQKLTKRDVDCNDTEAPKSKVRRTKQCSSLFEEKSSKSNILNDSPIYLTRLFDGKEIC
VINGDNELSKTDIEEILLQHRAKVVKNPLKENYCVIVGNVKPARAKNIVESKEYDVVSLD
WFKRVTKEENWSSLQDFLPWDLICSRESTERRLAQYYDEYYDNFTVDADEESLARSFKKV
EETVLNAIGLDHLQMKEMDKELFDNGISPYSIFRGMVGYFDNQSDQSKFEFSFMAGIIKD
TIDNFVTHVFIDRNSTSSKLKSLIDELQIPIIIVKSEWIGKCFGQNQLISNEEYLINL
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgagcgtgacattagctgccaaaatcgaatttgtgaaattatgtaatgtcttggaagaa
atcaagaaagcacgtgttgctaagagaaccgagattttggagaagttcatccagcagtgt
cgtcttgctggcctcaaacataaaacggaatgtccagatgcggatgtttcactattctct
ataatgagattacttttaccgagccgtgaacgagaacgtggagcgcacaatttaaaagaa
aaatcccttgctaatctttatgttcgcgtattttgtttgggtaaaggtagcaaggatgca
aataatcttgtacaatacaaaactccaacaacaaaaaagagtacaggatccgactttgcg
gagaaagcttattggattctacgaaatcggttaccacgcgagagttctggtttcacgata
gaacgaatcaatttattccttgacaatatatcatcgaaaaacgacaatattcggcaaaag
gatgaaacgtttaaagttttgttggggaagacaaatgcattggagtttaaatggataacg
cgaataatacttaaagatttgaaactcggtatcggaatgaagaggatattacaagttttt
catccagatgcaaatgcactgtctgatgtgtcaacagatttacgtcagatctgcgaaaca
ttatccgatccccagttgagataccaccatgatattcaaattttctctcattttaaaccc
atgttgttagaaagatgtaggattgaagatacaaagacacttttcagtaaatgtgaacag
tattttgtacaaacgaaatatgatggtgaacgatctcagatgcatatgaaagatgggaaa
tataaatactttacaagacaaggatacgatattacaaagaactacggttatggggaaact
agttcatcaggttttatgagcagcgtatttcatagacttttgaaaccacaatgtaaatca
ataattttggatggtgaattaatgggttggcacaagcagaagaaactattgggttcaaaa
gggatgaattttgacgttaaaaagctttcagaaaatagtcaccatcagccatgttttatc
gcattagatattattctatataatgatgttttacttattaatgaactttacgaaaaaaga
ctaaaaatattagaagatgcatttaaagaagaagagggctgtttaatgttgtgcaagtcc
attaaaatttctcagagggaagaattatgcagagtattcaatgaaagtatacaaaataag
gaagaaggaattgtactaaaaaaatatgacatgaaatataaacccaacgtacgagatggc
agtaattgttataaaataaaagctgagtattcggatgatctagtgcaagatgtagatctg
attattctcggcggttattatggcggaggaaaatttatgggtttaatgaaaagttttctg
atggcggtagcttccccgtcaaatgttccaggagagaatccctcaaaatttttatccgtt
gtatcagtcagcaatggcttatctatggaaacgttgaaagaactttggaaaagattcgaa
ggtaaatggcagaacgaatgtcctgaaaatgtgtctcctcctaggctagatccaccgaac
aagtggattcgtcctgaagaatctattattttgacaatacgagcaacagagatgacacaa
agtaaggattatccaacaggctatagcttacgattcccaagagtgatggatgttagaact
gataaaccatggtatagcgtttgcaccacaacggaactgttatcgctaattaaagattcg
aggccgattcaaaaactaacaaagcgagatgtagattgcaatgatactgaagctcccaaa
agcaaagtacgtaggacgaaacaatgctcgtcattgtttgaagagaagtcatcgaaatct
aatattcttaacgattcgccgatttatctcacacgactttttgacggtaaagaaatatgt
gtgataaatggagacaatgagttgtccaaaacagacattgaagaaattcttttgcaacat
agagcgaaagtggttaaaaatccattgaaagaaaactattgtgtgatcgttggtaacgtt
aaaccggcaagagcaaagaatattgtagaaagtaaagagtacgacgtagtatcgttggat
tggttcaaacgagttaccaaagaagaaaattggtcgtcgttacaagattttctaccatgg
gacttgatatgcagtcgtgaatcaacagaacgtcgactagcacaatattacgatgaatat
tacgacaattttacggtggatgcggacgaagagagtttggcacgttcgttcaaaaaagtt
gaagaaacggtattaaatgccatcgggttggatcatctacaaatgaaagaaatggataaa
gaattatttgacaacggaatatcaccatattctatatttcggggcatggtgggatatttt
gataatcagtcggatcagtccaagtttgaatttagttttatggcagggataattaaggac
actatcgacaattttgtaacacacgtgttcattgatagaaattccacgagttccaaactc
aaaagtctaatcgacgaactacaaataccgataataattgttaaaagcgaatggatcggt
aaatgtttcgggcagaatcaacttatttcgaacgaagaatatcttattaatttgtaa

DBGET integrated database retrieval system