Colletes gigas: 122399527
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Entry
122399527 CDS
T07492
Name
(RefSeq) dosage compensation regulator isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122399527
03012 Translation factors [BR:
cgig03012
]
122399527
Enzymes [BR:
cgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122399527
5.6.2.6 RNA 3'-5' helicase
122399527
Spliceosome [BR:
cgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122399527
Translation factors [BR:
cgig03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122399527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
Dicer_dimer
HA2_N
nSTAND3
ATPase
HA2_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
122399527
NCBI-ProteinID:
XP_043256201
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MGDIKSFFHQWCTKTTKEPQFDVRPTGLKHRQRFLCELRVPGFDYVGAGNSTNKKDAQGN
AARDFINYLVRTGHVNSNDVPKDAGNIQPQNTEPSNQESVGPSKSVFQDGMGPNDIGPAY
RPYNEHGHGNYTYMDRIADQKKVEDAEDVDVNSGIHGNWTIENAKSKLHQFMQSSKINAD
YKYTPLGPDHTRSFMAELSFYVQQLGRSITGRETGSNKQTASKSCALSLVRQLYHLGVIE
AFSGTLKKNKEAEQIKPYPVKISPELESQIHDVLTNLDIQPVIVQASLVKLENSQSSTAV
SLVTNQVLDDFISSVPQPAGVVSWSPPQQNWDPWTGCNIDEGPLAIMTLEQMSEDLQNEQ
RERLQQDDSMQKSIKERSALPVFLKKGEIMNAINENPIIIIRGNTGCGKTTQVCQFILDD
YIASGQGGFCSIAITQPRRISAVSVADRVAVERCESLGESVGYSVRFESCLPRPYGSIMF
CTVGVLLKKLEGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLYPDLRIILMSATIDT
TLFSNYFNNCPVIEIPGRSYPVQQYFLEDCIQLTNFVPPMDSKKRKSRDSDDIPAEGEPD
ENLNKVISEGYSVQTRNAMAQLTEKEISFELIEALLKYVKDQGIPGAVLVFLPGWNLIFA
LMKHLQQHPIYGGSGYVIIPLHSQLPREDQRKVFDPVPPGITKIILATNIAETSITINDV
VYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFNKM
DEHMTPEMFRTPLHELALSIKLLRLGSIGKFLSKAIEPPPIDAVIEAEVILREMKCLDKN
DELTPLGKILARLPIEPRLGKMMILGCIFRVGDALSTMAANSTTFPEVYNMGPESRRLTA
QQKWFAGARYSDHVAMLHAFQAWEEARCGGEYAEQSFCESKNLSIPTLRVTWEAKNQLQA
LLQSAGFPEETLCPTPLNYQAGADVRLDTITALLCMGLYPNVCYHKEKRKVLTTESKGAL
IHKTSVNCSNFEQNFPFPFFVFGEKIRTRAISCKQMTMVSPVHLLLFGSRKVEYVDNVVR
LDNWINLDMNPNHAAAIVALRPALESLVVKAAKEPETILELSPIEEKVLSLIKSLCGMNA
CRYELEQITGGGFQSRRPPRGHSTGFNSDAGNPAKFMRVGGGFRGAPRAGGFGNAGGGGS
FGNDGGGNFSRNNDYRGYRGGRNRGYGMNSHRRGGGNWGGRGFHGYY
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacataaaatcattttttcatcaatggtgcacgaaaactaccaaggaaccacag
tttgatgtgagaccaacagggctgaaacatcgacagcgttttctttgcgaactacgcgta
cctggatttgattatgttggtgcaggaaattcaaccaacaaaaaagatgcacaaggcaat
gcagctagagattttattaattatttagtccgaacaggacatgtgaattctaacgatgtt
ccaaaagatgcgggcaatattcagccgcagaatacagaacctagtaatcaggaatctgtc
ggcccgtcaaagtcggtgtttcaagatggaatgggaccgaatgatataggtcctgcatat
agaccatacaatgaacatggtcatggcaattacacttatatggacagaatagcagatcag
aaaaaagttgaggatgcggaagacgtcgatgtaaattctggaattcatgggaattggaca
atagaaaatgctaaatcaaaacttcatcaatttatgcaatctagcaaaattaatgcagat
tacaaatataccccgctgggtccagatcatacgaggagtttcatggctgaattgtcattt
tatgtgcaacaacttggaagaagtattactggtcgtgaaactggttctaataagcaaact
gcatcgaaaagttgtgctttgtctcttgttcggcaattatatcatcttggcgtgatcgag
gcgtttagcggtactttgaaaaaaaataaagaagcggaacaaattaagccatatccagta
aaaatttccccagaactggaaagtcaaattcacgatgttttaacaaatttagatatacaa
cctgttatagtccaggcatcgcttgtgaaattagaaaattcccaatctagcactgctgtc
tctttagtaacaaatcaagtattggatgattttatttcgtctgtaccacaacctgctgga
gtagtaagttggtctccgccgcagcaaaattgggatccatggacaggttgtaatatagac
gaaggaccgttagccatcatgactttagaacaaatgtcggaagatttgcaaaacgaacaa
cgagaaagattgcaacaagatgatagtatgcaaaaaagtattaaagaaagatcggctttg
ccagttttcttgaaaaagggggaaataatgaatgctataaacgaaaatccaataataatt
attcgaggaaatacaggctgtggtaaaacaactcaagtatgtcaattcattttggatgat
tacattgcatcgggtcaaggtggattttgcagtattgcaattacacagcccagaagaata
agtgctgtgtctgtagccgatcgagttgctgtagaaagatgcgaaagtttaggagagtct
gttggttattccgtacgatttgaatcttgtttgccaagaccttacggcagcataatgttc
tgcactgttggtgtacttttgaagaaactggaaggtggcttaagaggtgtttcgcacgtt
atagtcgacgaaattcatgaacgagatgtaaattctgatttcattatggtggttcttcgc
gatatgattcatctatatccagatttacgaatcattctaatgtcagctacgatcgataca
acgttgttcagtaattatttcaataactgtccagtaatagaaataccgggccggtcatat
cctgtgcaacaatacttcttagaagattgtatacaattaacgaattttgtaccacctatg
gattccaaaaaacgtaaaagtcgtgattcggatgatataccagcagaaggagaaccagat
gaaaatttgaataaggttattagcgaaggctattccgtacaaacaaggaacgctatggcg
caacttaccgagaaggagataagttttgaacttatagaggctcttttgaaatatgtcaag
gaccaaggtattccaggtgccgtattagtatttttacctggatggaatttaatatttgca
ttgatgaaacatttacaacagcatccgatttatggaggttcgggttacgtaattatacca
ttgcattctcagttacctagagaagatcagcgtaaagttttcgaccctgtaccgccagga
ataacgaaaattattttagccacaaatatagctgaaacatccattacgattaatgatgta
gtgtatgtaatagattcgtgtaaagccaaaatgaagctctttacttctcacaataacatg
acaaactacgccactgtgtgggccagtaaaacaaatttagaacagaggaaaggtcgagca
ggtcgcgttagaccaggattttgtttccacttatgctccaaagcacgtttcaataaaatg
gacgaacacatgactcccgagatgtttagaacacctttacacgagttagcgttgagtatt
aagttgctacgattaggcagtattggaaagtttttgtcaaaggcaattgaaccgccaccg
atagatgctgtaatcgaagcggaggtcatattacgtgagatgaagtgtttagataaaaat
gatgaattgacaccgcttggtaaaatattggcccgtttacctatagagccacggttaggc
aaaatgatgattctgggttgcatatttcgtgttggcgatgcactgtctacgatggctgca
aatagtacgacatttccagaagtatataatatgggacctgaatccagacgattgacagca
caacaaaaatggtttgccggtgcaaggtatagtgatcatgtggcgatgttacacgcgttt
caagcatgggaagaagctagatgcggtggcgaatatgcggagcaatcattttgcgagtca
aaaaatttaagtataccgacattaagggttacatgggaagctaagaatcagttgcaagca
cttctacaaagtgctggatttccggaagaaactctctgtcctacaccattaaattatcaa
gccggcgcggatgttcgtcttgatacgattactgctttattatgtatgggcctttatcca
aatgtttgttatcataaagaaaaaagaaaggttcttactactgaatctaaaggagcgctg
atccataaaacatcggtgaactgcagtaattttgaacaaaattttccattcccatttttc
gtatttggagaaaagatccgcacaagagcaatatcttgcaagcaaatgactatggtatcc
ccggtacatctcttgttatttggttctcgaaaagtcgaatacgttgataatgtagtgaga
ctggacaattggattaatttagacatgaatccaaatcacgcagcagcaatagtagcctta
cggcctgccttggaaagtcttgttgtaaaagctgcgaaagaaccggaaactattttggaa
ttaagtcctatcgaagaaaaagtattaagtttaattaaatcattatgcggaatgaatgcc
tgtcgttacgaattagaacagattacaggtggtggttttcaatcacgaagaccaccaaga
ggtcactcgactggtttcaattcggatgccggtaaccctgcgaaatttatgcgggttggt
ggtggttttcgcggcgctcctcgtgccggtggttttggtaatgctggcggaggtggtagt
tttggaaatgatggggggggtaacttttcaagaaataatgattaccgtggatacagaggt
ggtagaaataggggatatggaatgaattcacataggcgaggtggcggaaactggggcggt
agaggttttcacggctattattaa
DBGET
integrated database retrieval system
